FFCP PHASE1:Hg19::chr20:49639632..49639693,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3755 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6248 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UIX4,Q5JXL5,Q86Y85 | |||
|association_with_transcript=0bp_to_ENST00000371571,ENST00000439216,NM_002237,uc002xwa.3_5end | |||
|cluster_id=chr20:49639632..49639693,- | |||
|description=CAGE_peak_1_at_KCNG1_5end | |||
|id=chr20:49639632..49639693,- | |||
|ontology_enrichment_celltype=CL:0000055!1.11e-16!180;CL:0000183!4.22e-11!59;CL:0000187!3.65e-10!54;CL:0000393!6.14e-10!60;CL:0000211!6.14e-10!60;CL:0000680!5.25e-09!57;CL:0000056!5.25e-09!57;CL:0000355!5.25e-09!57;CL:0002321!7.73e-09!248;CL:0000220!1.24e-08!246;CL:0000192!1.82e-07!42;CL:0000514!1.82e-07!42;CL:0000035!5.68e-07!20 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000187,1.22e-10,55;CL:0000393,2.09e-10,61;CL:0000211,2.09e-10,61;CL:0000680,3.68e-09,58;CL:0000056,3.68e-09,58;CL:0000355,3.68e-09,58;CL:0002321,3.48e-08,250;CL:0000192,7.40e-08,43;CL:0000514,7.40e-08,43;CL:0000359,9.54e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.23e-12!365;UBERON:0000486!3.21e-09!82;UBERON:0000481!4.02e-09!347;UBERON:0000924!1.09e-08!173;UBERON:0006601!1.09e-08!173;UBERON:0004121!1.56e-08!169;UBERON:0000119!1.57e-08!312;UBERON:0000468!2.53e-08!659;UBERON:0000914!3.15e-08!83;UBERON:0002329!3.15e-08!83;UBERON:0003077!3.15e-08!83;UBERON:0003059!3.15e-08!83;UBERON:0007282!3.15e-08!83;UBERON:0009618!3.15e-08!83;UBERON:0007285!3.15e-08!83;UBERON:0000483!9.04e-08!309;UBERON:0000922!1.35e-07!612;UBERON:0004290!1.38e-07!70;UBERON:0001134!3.98e-07!61;UBERON:0002036!3.98e-07!61;UBERON:0003082!3.98e-07!61;UBERON:0000478!4.27e-07!24;UBERON:0002050!4.37e-07!605;UBERON:0005423!4.37e-07!605;UBERON:0002385!6.81e-07!63;UBERON:0001015!6.81e-07!63;UBERON:0000383!6.81e-07!63;UBERON:0000923!8.40e-07!604;UBERON:0005291!8.40e-07!604;UBERON:0006598!8.40e-07!604;UBERON:0002532!8.40e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;2.85e-07;24!UBERON:0001801;7.35e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000486,1.89e-09,83;UBERON:0007503,1.05e-08,78;UBERON:0004121,2.59e-08,171;UBERON:0000924,2.59e-08,171;UBERON:0006601,2.59e-08,171;UBERON:0000119,3.67e-08,309;UBERON:0007524,5.33e-08,73;UBERON:0003077,5.62e-08,72;UBERON:0007285,5.62e-08,72;UBERON:0002329,9.02e-08,71;UBERON:0003059,9.02e-08,71;UBERON:0007282,9.02e-08,71;UBERON:0004290,9.02e-08,71;UBERON:0009618,9.02e-08,71;UBERON:0001134,1.93e-07,62;UBERON:0002036,1.93e-07,62;UBERON:0003082,1.93e-07,62;UBERON:0000483,2.08e-07,306;UBERON:0000478,2.96e-07,24;UBERON:0002385,3.36e-07,64;UBERON:0001015,3.36e-07,64;UBERON:0000383,3.36e-07,64;UBERON:0001801,8.37e-07,14 | |||
|phase1_expression=3.81524596468169,1.49870366723688,4.36958652697511,1.0007329835313,3.12872766099101,5.23403114460221,12.6649939084155,16.4247167090976,1.04474251279935,19.4129809836192,34.1922572306489,25.1207577949698,37.4549109084404,3.58922423584135,10.6047160232933,26.893005858071,28.3266428171269,22.6396128020086,37.0828927080785,38.4137701199578,70.992240553,75.5425878762192,10.8769675109802,7.66496780408152,13.9352329950231,0,0,0,0,0,0.154816123316076,3.67768489791571,10.2410012384605,30.6895828438434,0,0,0,0,0,0,0,0,0,0.145398238779565,0.755751887377619,0.242584061187816,0.464858073811369,0.411167888021826,0.309706370895104,0,0.256160706529101,0,0.344745680736619,0.645484683583826,0,0,0.272906150057846,0.224723484445085,0,0.320929027076094,0,0,0.199463657621632,0,0.580418477257168,1.13477044938228,0,0,0,0,0,0.368277635987565,0.316462387440884,0,0,0.209658645508376,0,0,0,0,0,0,17.5996244461323,27.3069305631066,28.4642961236338,17.0692089026603,20.0197993518006,31.0366317575421,50.2394103316495,30.5297201451317,10.8150464130795,8.80855784056408,8.02773779062981,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0.301150238155546,0,0,0,0,0,0,0,4.87613732627923,10.0605128955545,19.6908345239037,6.14446559053763,6.51739283826656,5.64901423947212,3.1811437882044,11.1926020169606,11.4387128768522,48.5587380443015,35.6609229914092,6.48346423713678,55.0085885321739,29.2919709799699,0.97364218096405,0.348259474598534,0.398873881556595,0,0,0,0.993812036833525,4.30117297553062,0.694281003215189,0,0.419499436209906,2.20094433552054,2.29894463190492,1.03366703667732,0,0.66944122552934,4.02829317109147,3.80136052859256,1.95249646038536,1.47065232138347,6.48113558305408,0.357198913136319,1.12264686313085,0.788280363383256,3.06633274931766,0,1.28241220751285,1.31780417436063,0,17.4437620857014,11.9273268406876,3.54565432660823,2.25095607382472,7.74458876021797,6.38403087957043,6.72813120170769,99.2765660286256,40.4534779404142,1.8672662123986,15.3570166159444,6.86539993076527,8.62737337576109,6.91411109375999,61.1578937086209,6.55536161343673,7.98660550162229,5.23070381931304,41.5718125198928,30.9177323743131,29.3542186007699,2.04154171254893,8.47556789451199,8.369388275237,2.37600571456411,14.5887488274349,20.0235499626366,58.9266876289316,6.39677233025452,12.3867334673245,1.38532057742091,17.1201272143527,6.74273150757843,21.7845185414565,15.8805056424029,9.32826105582082,9.1829677191984,9.53693555218028,11.1033705551229,9.06862257298262,9.53269998168828,8.56137539125313,6.91982962189192,12.1796256451498,8.58274832429989,5.98324341174946,2.7479829659198,6.39017266529906,5.54136540252021,6.44330250779853,23.1913023795956,9.00062197949754,6.02289650316908,7.07447495551653,12.9879172955056,9.17932148669195,10.7807497215985,9.58819233327388,17.153935876564,3.12899064659632,0.643240938192885,1.38134921352481,6.50115099244771,5.77503585335668,0.473227200159376,0,0,0.220587945464788,0,0,0.134831308160164,0.196221465125346,0,4.42893272774789,96.7668239243776,13.5819423739362,17.641045366265,0,0,0,0,2.33678033231916,30.5390702331375,13.4992851052609,44.9607013030478,17.9946860616819,24.6285264121689,24.109814592964,21.8386304908711,70.7223575923839,6.02838105870399,56.9432167043735,1.29929802984966,1.38895653772983,0.570762456703795,1.58040879591855,4.29243081047436,0,0,0.148631162288728,0.93733833986777,11.4227847175224,5.67100388969546,7.52291590703926,18.8912060034075,27.9869355790604,0,0.088048434013226,0,0,0,1.33345578013555,6.11181480893244,0,5.13217338068116,1.95372236136315,0.300343057843917,1.14330573052231,40.3671903643299,46.2117672963277,32.7822137619647,32.57647237096,57.2250313363012,28.740293586904,14.0947201789981,5.2003718455683,22.3770415608064,24.1143524439573,24.7772626484972,10.1514375497285,30.3868099019208,17.2880470723961,21.1728519790928,6.39705507736582,16.630989331602,8.13886318060882,9.58686804460323,17.1953544833138,0,0,0,14.8567410404781,5.7430967917057,22.8219048065149,0.144781306667579,1.02738161275192,0.895304816199478,0,0,0,0.128343036279748,1.77866236955724,6.50699269288109,1.54657762555539,5.86306928670221,3.18969375826582,0,0,0,2.57652132610194,5.50187573165645,16.0046363982844,6.65506756898583,4.10386674233472,4.41566762095017,5.15422225967938,10.5331134904702,13.6444502433591,34.1461135265266,39.1893103135908,54.3889047198024,1.47702144595741,12.9228763925409,12.6963066810017,0.620304078368662,0.431428401637234,0.320182673410333,24.2502057157008,58.252403828674,52.011130452705,6.4508030032882,2.60885354589706,4.2099014164961,10.7636885374789,4.60536524160033,20.7501558275254,2.96836132889982,19.4304214191346,19.8869132350702,7.06293541718759,9.34657972530518,8.8319887629569,2.29632954224082,2.6065841139427,53.0386496270763,5.51109351190112,9.650831904356,5.37610101333639,19.8527829679261,5.39107359730903,15.6869953835371,2.92278449306521,3.4832037534649,7.96133688496276,9.86543490603791,3.45465465763423,9.25363516141736,16.2567862526312,13.043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| |||
|short_description=p1@KCNG1 | |||
}} |
Latest revision as of 22:49, 16 September 2015
Short description: | p1@KCNG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KCNG1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000371571, ENST00000439216, NM_002237, uc002xwa.3_5end |
EntrezGene: | KCNG1 |
HGNC: | 6248 |
UniProt: | Q9UIX4Q5JXL5Q86Y85 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 1.22e-10 | 55 |
electrically responsive cell | 2.09e-10 | 61 |
electrically active cell | 2.09e-10 | 61 |
muscle precursor cell | 3.68e-09 | 58 |
myoblast | 3.68e-09 | 58 |
multi-potent skeletal muscle stem cell | 3.68e-09 | 58 |
embryonic cell | 3.48e-08 | 250 |
smooth muscle cell | 7.40e-08 | 43 |
smooth muscle myoblast | 7.40e-08 | 43 |
vascular associated smooth muscle cell | 9.54e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
multilaminar epithelium | 1.89e-09 | 83 |
epithelial vesicle | 1.05e-08 | 78 |
ectoderm-derived structure | 2.59e-08 | 171 |
ectoderm | 2.59e-08 | 171 |
presumptive ectoderm | 2.59e-08 | 171 |
cell layer | 3.67e-08 | 309 |
dense mesenchyme tissue | 5.33e-08 | 73 |
paraxial mesoderm | 5.62e-08 | 72 |
presumptive paraxial mesoderm | 5.62e-08 | 72 |
somite | 9.02e-08 | 71 |
presomitic mesoderm | 9.02e-08 | 71 |
presumptive segmental plate | 9.02e-08 | 71 |
dermomyotome | 9.02e-08 | 71 |
trunk paraxial mesoderm | 9.02e-08 | 71 |
skeletal muscle tissue | 1.93e-07 | 62 |
striated muscle tissue | 1.93e-07 | 62 |
myotome | 1.93e-07 | 62 |
epithelium | 2.08e-07 | 306 |
extraembryonic structure | 2.96e-07 | 24 |
muscle tissue | 3.36e-07 | 64 |
musculature | 3.36e-07 | 64 |
musculature of body | 3.36e-07 | 64 |
anterior segment of eyeball | 8.37e-07 | 14 |