FFCP PHASE1:Hg19::chr22:43355826..43355853,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11252 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8571 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UNF0 | |||
|association_with_transcript=30bp_to_ENST00000402229,uc003bde.3_5end | |||
|cluster_id=chr22:43355826..43355853,- | |||
|description=CAGE_peak_5_at_PACSIN2_5end | |||
|id=chr22:43355826..43355853,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.15e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.77e-38!115;UBERON:0001049!4.13e-13!57;UBERON:0005068!4.13e-13!57;UBERON:0006241!4.13e-13!57;UBERON:0007135!4.13e-13!57;UBERON:0003075!8.07e-13!86;UBERON:0007284!8.07e-13!86;UBERON:0002346!9.60e-13!90;UBERON:0004111!2.83e-11!241;UBERON:0000955!9.89e-11!69;UBERON:0006238!9.89e-11!69;UBERON:0005743!1.41e-10!86;UBERON:0002616!1.62e-10!59;UBERON:0001017!1.41e-09!82;UBERON:0000025!1.61e-09!194;UBERON:0003080!6.08e-09!42;UBERON:0000073!1.00e-08!94;UBERON:0001016!1.00e-08!94;UBERON:0002780!2.02e-08!41;UBERON:0001890!2.02e-08!41;UBERON:0006240!2.02e-08!41;UBERON:0000477!1.77e-07!286;UBERON:0000033!4.98e-07!123;UBERON:0000481!5.40e-07!347;UBERON:0003056!9.16e-07!61;UBERON:0004921!9.53e-07!129;UBERON:0004185!9.53e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0000125;3.30e-11;9!UBERON:0002308;3.30e-11;9!UBERON:0009663;2.99e-08;7!UBERON:0002298;6.57e-08;6!UBERON:0007023;1.52e-07;114!UBERON:0002365;2.61e-07;31!UBERON:0002330;2.61e-07;31!UBERON:0002423;7.31e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.89e-27,114;UBERON:0000125,5.69e-11,9;UBERON:0002308,5.69e-11,9;UBERON:0003075,1.00e-09,82;UBERON:0007284,1.00e-09,82;UBERON:0000073,1.47e-09,53;UBERON:0002616,1.47e-09,53;UBERON:0010371,2.41e-09,104;UBERON:0002346,6.08e-09,86;UBERON:0001049,9.11e-09,56;UBERON:0005068,9.11e-09,56;UBERON:0006241,9.11e-09,56;UBERON:0007135,9.11e-09,56;UBERON:0011216,3.56e-08,223;UBERON:0009663,3.61e-08,7;UBERON:0001041,6.95e-08,87;UBERON:0000955,8.79e-08,68;UBERON:0006238,8.79e-08,68;UBERON:0002298,1.07e-07,6;UBERON:0000025,1.30e-07,192;UBERON:0010314,1.81e-07,132;UBERON:0001048,1.83e-07,160;UBERON:0002365,2.56e-07,31;UBERON:0002330,2.56e-07,31;UBERON:0009497,5.96e-07,25;UBERON:0000015,5.96e-07,25;UBERON:0002423,5.96e-07,25;UBERON:0006235,5.96e-07,25;UBERON:0004161,5.96e-07,25 | |||
|phase1_expression=0,0.214100523890983,0.281908808191942,0,0,0.872338524100369,0,0,0,0.737201809504527,0.697801167972428,0.436882744260345,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0.739508020333575,0,0,0,0,0,0,0.223915474239924,0.647787332037959,0,0,0,1.21292030593908,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0.639337125799041,0.329851300186716,0.398927315243264,0,0,0.56738522469114,0,0,0,0,0.605399502633369,0,0.316462387440884,0.845021145247767,2.12604299965044,0.628975936525128,0.22465726229299,0.300353785683013,0,0,0.39783335439818,0.547992461293902,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0,0,0,0.654895377488563,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0.275118041940067,0,0,0.71153252537342,0.33472061276467,0.805658634218294,1.52054421143703,0.488124115096339,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0.506522046658319,0.132409180813219,0,0,0,0,0.74000264525148,0,0.67355336034844,0.163461903113459,0.302714855289863,0,0.937285727335186,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0.453728732640084,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0.236613600079688,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,2.53510069643662,13.7595810334868,1.18157981336281,0,0.491953754172454,0,0,0,0,0.0925884451585296,0.325808305310325,0,0,0,0.352226082707465,0.577465791044295,0,0.190254152234598,0,0,0,0,0,0,0,0,2.86587272649115,3.77824120068151,0,0,0.176096868026452,0,0.576479813667846,0.12624243342638,0,0,0,0,0,0,0.285826432630578,0.112131084345361,0.87192013766656,0,0.129271715757778,0,0,0,0,0,0,0,0.57191197463259,0,0,0,0.355391948742546,0,1.50719688529793,0.871533458600294,3.499054691372,0,0,0,0.479249710983165,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0.749007023947182,0,1.24324654030811,0,0,0.271265023699736,0,0,0,0,0.300946099727719,2.27407504055985,0,0.664225598535437,0,0,0,0.686286847621712,0.206768026122887,0,0.106727557803444,0,0,0.30239029332968,0.744323423456331,0.153461973288062,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0.120859449591622,0,0.828728900423067,0.34444334449382,0.546273504020151,0.393373244878272,0,0.231046011313244,0,0,0.211103257785751,1.13733384070897,0.170093705276516,0.215915916102139,0,0,0,0.254876273045038,0,0,0.657779629937804,1.0457418040996,0,1.64007322849853,1.62689197332152,1.33953315142039,0,0,0.574265537996172,0,0,0.386682873168488,0,0.15350367472613,0,0.429680979473094,0.145016693914229,0,0.534192213880424,1.4875642382488,1.15314040419064,0.382838137483752,1.71968227454435,0.464845549297286,0,0,0.308033580176089,0.532306030317022,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0.48763373908959,0,0,0.272999822815972,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0.35667105148125,0,0.211107635297664,0,0,0.699869440489966,0.384888450902048,0,2.17781969722645,0.659006605437454,0.86101074534246,0,0.443430153536676,0,0,0,1.70894156152249,0.238231775457789,0,0,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0,0,1.2700414963433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11362469558097,0,0,0.99921590399346,0,1.30998378285754,3.07667176470977,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.597743964753209,0.276283915531148,0,0.20453736500431,0.123084805461069,0,1.61763032065188,7.8769316857268,0,0.986434056369336,0,0,0.969332746095218,0.74214478529481,1.99613798001194,0,0,2.17499872630438,2.38966241399549,1.01701460117107,0,0,0,0,1.77148277162768,0.60298219312704,1.52581736317083,0.884634079449797,0.886642856860642,0.438770794307945,1.30726156222788,0,0.615602068030377,0,0.922255617552241,0.179515288819544,0,0,0.0915975934018623,0,0,0,0.332423363800313,0.902382642468723,0.588187602953219,0.671286347903371,0.189753732724185,0.317873157960757,0.210998064528027,0.326465616318295,0.282706142867882,0,0,0.707660516026713,0.611030144933625,0,0,0,1.14581926067151,1.60515529459758,1.40558667435203,0,0.391329237864179,0.728341138602278,0.394584402849391,0,0,1.20054501294127,1.65355761355942,0.103688191397247,0,0,0.941798755221676,0,0,2.63481878724963,0,0.195984794828755,0,0.52418000472609,0,0,0.219267951258557,0,1.06687918137261,0,0.451961481561065,0.959293472527256,0.19871461170299,0.316553979779393,0,0.240476460754601,5.12287187374446,0.19980960958213,2.73771792592801,0,0.171594997861965,1.1524383839052,0,1.17847017308398,0,0,0.305994652908965,0,2.40168115483916,1.50595916781192,0,0,0,2.23425921017803,3.66656678418694,2.15361907373044,1.79711100449092,5.15071257763885,1.78537165953498,2.5529719544956,0,0,0.472699093843342,0.329663433524666,0.13480708770837,1.77169466726548,0,0,0.136203406111576,0,0,0,0.2249738915515,0,0.668245123238271,0,0.86686278029118,0.314727528809989,0,0.537862017998534,0,2.85878130549347,2.64836788146173,0,0,0,0.326587360109409,1.19730191562487,0.574647645245373,0,0.226624183040251,4.68967147769864,1.32506888912221,3.61992277812342,1.05786081394152,1.71086837884329,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| |||
|short_description=p5@PACSIN2 | |||
}} |
Latest revision as of 01:05, 25 September 2015
Short description: | p5@PACSIN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PACSIN2_5end |
Coexpression cluster: | NA |
Association with transcript: | 30bp_to_ENST00000402229, uc003bde.3_5end |
EntrezGene: | PACSIN2 |
HGNC: | 8571 |
UniProt: | Q9UNF0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 7.89e-27 | 114 |
neural nucleus | 5.69e-11 | 9 |
nucleus of brain | 5.69e-11 | 9 |
neural plate | 1.00e-09 | 82 |
presumptive neural plate | 1.00e-09 | 82 |
regional part of nervous system | 1.47e-09 | 53 |
regional part of brain | 1.47e-09 | 53 |
ecto-epithelium | 2.41e-09 | 104 |
neurectoderm | 6.08e-09 | 86 |
neural tube | 9.11e-09 | 56 |
neural rod | 9.11e-09 | 56 |
future spinal cord | 9.11e-09 | 56 |
neural keel | 9.11e-09 | 56 |
organ system subdivision | 3.56e-08 | 223 |
telencephalic nucleus | 3.61e-08 | 7 |
foregut | 6.95e-08 | 87 |
brain | 8.79e-08 | 68 |
future brain | 8.79e-08 | 68 |
brainstem | 1.07e-07 | 6 |
tube | 1.30e-07 | 192 |
structure with developmental contribution from neural crest | 1.81e-07 | 132 |
primordium | 1.83e-07 | 160 |
exocrine gland | 2.56e-07 | 31 |
exocrine system | 2.56e-07 | 31 |
epithelium of foregut-midgut junction | 5.96e-07 | 25 |
anatomical boundary | 5.96e-07 | 25 |
hepatobiliary system | 5.96e-07 | 25 |
foregut-midgut junction | 5.96e-07 | 25 |
septum transversum | 5.96e-07 | 25 |