FFCP PHASE1:Hg19::chr9:132597686..132597715,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:132597686..132597715,+
|short_description=p2@USP20
|description=CAGE_peak_2_at_USP20_5end
|association_with_transcript=0bp_to_NM_001110303,NM_006676,uc004b...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10868 | |EntrezGene=10868 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12619 | |HGNC=12619 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y2K6 | |UniProt=Q9Y2K6 | ||
|association_with_transcript=0bp_to_NM_001110303,NM_006676,uc004byr.2,uc004bys.2_5end | |||
|cluster_id=chr9:132597686..132597715,+ | |||
|description=CAGE_peak_2_at_USP20_5end | |||
|id=chr9:132597686..132597715,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.47e-14!115;UBERON:0002619!7.68e-08!22;UBERON:0001049!9.79e-08!57;UBERON:0005068!9.79e-08!57;UBERON:0006241!9.79e-08!57;UBERON:0007135!9.79e-08!57;UBERON:0001950!1.02e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;5.08e-08;22!UBERON:0001950;7.68e-08;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.59e-14,114;UBERON:0002619,5.71e-08,22;UBERON:0001950,7.61e-08,20;UBERON:0001049,8.24e-08,56;UBERON:0005068,8.24e-08,56;UBERON:0006241,8.24e-08,56;UBERON:0007135,8.24e-08,56;UBERON:0000073,1.37e-07,53;UBERON:0002616,1.37e-07,53;UBERON:0003075,3.58e-07,82;UBERON:0007284,3.58e-07,82;UBERON:0002780,9.89e-07,41;UBERON:0001890,9.89e-07,41;UBERON:0003080,9.89e-07,41;UBERON:0006240,9.89e-07,41 | |||
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| ||
|short_description=p2@USP20 | |||
}} | }} |
Latest revision as of 23:36, 15 September 2015
Short description: | p2@USP20 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_USP20_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001110303, NM_006676, uc004byr.2, uc004bys.2_5end |
EntrezGene: | USP20 |
HGNC: | 12619 |
UniProt: | Q9Y2K6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.59e-14 | 114 |
regional part of cerebral cortex | 5.71e-08 | 22 |
neocortex | 7.61e-08 | 20 |
neural tube | 8.24e-08 | 56 |
neural rod | 8.24e-08 | 56 |
future spinal cord | 8.24e-08 | 56 |
neural keel | 8.24e-08 | 56 |
regional part of nervous system | 1.37e-07 | 53 |
regional part of brain | 1.37e-07 | 53 |
neural plate | 3.58e-07 | 82 |
presumptive neural plate | 3.58e-07 | 82 |
regional part of forebrain | 9.89e-07 | 41 |
forebrain | 9.89e-07 | 41 |
anterior neural tube | 9.89e-07 | 41 |
future forebrain | 9.89e-07 | 41 |