FFCP PHASE1:Mm9::chr10:12683325..12683329,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=3|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:12683325..12683329,+|id=chr10:12683325..12683329,+|ontology_enrichment_celltype=CL:0000791!1.22e-16!9;CL:0000789!1.22e-16!9;CL:0002420!1.22e-16!9;CL:0002419!1.22e-16!9;CL:0000790!1.22e-16!9;CL:0000624!8.00e-15!8;CL:0000838!1.44e-14!12;CL:0000542!2.85e-13!13;CL:0000051!2.85e-13!13;CL:0000084!2.97e-13!11;CL:0000827!2.97e-13!11;CL:0000738!7.02e-12!17;CL:0002087!7.02e-12!17;CL:0000893!5.05e-11!6;CL:0002489!5.05e-11!6;CL:0000898!5.05e-11!6;CL:0000809!5.05e-11!6;CL:0000810!5.05e-11!6;CL:0000895!5.05e-11!6;CL:0000808!5.05e-11!6;CL:0000894!5.05e-11!6;CL:0000806!5.05e-11!6;CL:0000807!5.05e-11!6;CL:0000805!5.05e-11!6;CL:0002425!5.05e-11!6;CL:0002436!5.05e-11!6;CL:0002427!5.05e-11!6;CL:0002428!5.05e-11!6;CL:0002429!5.05e-11!6;CL:0002433!5.05e-11!6;CL:0002431!5.05e-11!6;CL:0002432!5.05e-11!6;CL:0000988!1.02e-08!32;CL:0002032!1.02e-08!32;CL:0000037!1.02e-08!32;CL:0000566!1.02e-08!32;CL:0000837!1.02e-08!32;CL:0002031!2.85e-07!25;CL:0002320!6.04e-07!46;CL:0000134!6.04e-07!46;CL:0000063!7.52e-07!66|ontology_enrichment_celltype_v019_2=CL:0000791,2.95e-14,9;CL:0000789,2.95e-14,9;CL:0002420,2.95e-14,9;CL:0002419,2.95e-14,9;CL:0000790,2.95e-14,9;CL:0000084,9.93e-12,11;CL:0000827,9.93e-12,11;CL:0000738,1.41e-11,17;CL:0002087,1.41e-11,17;CL:0000838,8.85e-11,12;CL:0000542,5.65e-10,13;CL:0000051,5.65e-10,13;CL:0000624,1.61e-09,8;CL:0000815,2.09e-09,1;CL:0000792,2.09e-09,1;CL:0000625,6.33e-09,1;CL:0000355,1.05e-08,9;CL:0002031,6.94e-08,25|ontology_enrichment_disease=DOID:0060100!2.23e-07!3;DOID:4045!2.23e-07!3|ontology_enrichment_disease_v019_2=DOID:0060100,7.81e-25,3;DOID:4045,7.81e-25,3;DOID:0050686,9.15e-13,6|ontology_enrichment_uberon=UBERON:0002384!6.04e-07!46|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.05e-08,9;UBERON:0002036,1.05e-08,9;UBERON:0002385,1.05e-08,9;UBERON:0000486,1.05e-08,9;UBERON:0007503,1.05e-08,9;UBERON:0001015,1.05e-08,9;UBERON:0002329,1.05e-08,9;UBERON:0003082,1.05e-08,9;UBERON:0003059,1.05e-08,9;UBERON:0007282,1.05e-08,9;UBERON:0004290,1.05e-08,9;UBERON:0009618,1.05e-08,9;UBERON:0000383,6.86e-08,10;UBERON:0007524,3.21e-07,11;UBERON:0003077,3.21e-07,11;UBERON:0007285,3.21e-07,11|phase1_expression=0,0,0.909998478779072,0,0,0,0.467225281191051,4.77756296733832,1.12630977721333,0.936258105287974,0.34243593645101,0.0797721589953364,0.684802919724823,0.262261207256992,0,0,0,0,0,0,0,0,0,0.47997726838022,0.68822784320151,0,0.430761996159075,0.430942465371778,0,0,0,0,0,0,0,0,0,10.4632907684227,6.2506827561904,2.61761871986899,11.1763982725893,17.7591826089196,3.88408282424923,0.377690453926732,0.101376931219515,0,0,0,0,0,0,0,0.167782606057736,2.90144856804538,1.00828139742739,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0.599902730993408,0.635351135365324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0.193952487167626,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0.324270453550071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,1.50791283939272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0.370389054739423,0,0,0,0.339956859987711,0.279902904647316,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0.120195449519969,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:12683325..12683329,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:12683325..12683329,+ | |||
|description=CAGE_peak_at_chr10:12683325..12683329,+ | |||
|id=chr10:12683325..12683329,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.22e-16!9;CL:0000789!1.22e-16!9;CL:0002420!1.22e-16!9;CL:0002419!1.22e-16!9;CL:0000790!1.22e-16!9;CL:0000624!8.00e-15!8;CL:0000838!1.44e-14!12;CL:0000542!2.85e-13!13;CL:0000051!2.85e-13!13;CL:0000084!2.97e-13!11;CL:0000827!2.97e-13!11;CL:0000738!7.02e-12!17;CL:0002087!7.02e-12!17;CL:0000893!5.05e-11!6;CL:0002489!5.05e-11!6;CL:0000898!5.05e-11!6;CL:0000809!5.05e-11!6;CL:0000810!5.05e-11!6;CL:0000895!5.05e-11!6;CL:0000808!5.05e-11!6;CL:0000894!5.05e-11!6;CL:0000806!5.05e-11!6;CL:0000807!5.05e-11!6;CL:0000805!5.05e-11!6;CL:0002425!5.05e-11!6;CL:0002436!5.05e-11!6;CL:0002427!5.05e-11!6;CL:0002428!5.05e-11!6;CL:0002429!5.05e-11!6;CL:0002433!5.05e-11!6;CL:0002431!5.05e-11!6;CL:0002432!5.05e-11!6;CL:0000988!1.02e-08!32;CL:0002032!1.02e-08!32;CL:0000037!1.02e-08!32;CL:0000566!1.02e-08!32;CL:0000837!1.02e-08!32;CL:0002031!2.85e-07!25;CL:0002320!6.04e-07!46;CL:0000134!6.04e-07!46;CL:0000063!7.52e-07!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.95e-14,9;CL:0000789,2.95e-14,9;CL:0002420,2.95e-14,9;CL:0002419,2.95e-14,9;CL:0000790,2.95e-14,9;CL:0000084,9.93e-12,11;CL:0000827,9.93e-12,11;CL:0000738,1.41e-11,17;CL:0002087,1.41e-11,17;CL:0000838,8.85e-11,12;CL:0000542,5.65e-10,13;CL:0000051,5.65e-10,13;CL:0000624,1.61e-09,8;CL:0000815,2.09e-09,1;CL:0000792,2.09e-09,1;CL:0000625,6.33e-09,1;CL:0000355,1.05e-08,9;CL:0002031,6.94e-08,25 | |||
|ontology_enrichment_disease=DOID:0060100!2.23e-07!3;DOID:4045!2.23e-07!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,7.81e-25,3;DOID:4045,7.81e-25,3;DOID:0050686,9.15e-13,6 | |||
|ontology_enrichment_uberon=UBERON:0002384!6.04e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.05e-08,9;UBERON:0002036,1.05e-08,9;UBERON:0002385,1.05e-08,9;UBERON:0000486,1.05e-08,9;UBERON:0007503,1.05e-08,9;UBERON:0001015,1.05e-08,9;UBERON:0002329,1.05e-08,9;UBERON:0003082,1.05e-08,9;UBERON:0003059,1.05e-08,9;UBERON:0007282,1.05e-08,9;UBERON:0004290,1.05e-08,9;UBERON:0009618,1.05e-08,9;UBERON:0000383,6.86e-08,10;UBERON:0007524,3.21e-07,11;UBERON:0003077,3.21e-07,11;UBERON:0007285,3.21e-07,11 | |||
|phase1_expression=0,0,0.909998478779072,0,0,0,0.467225281191051,4.77756296733832,1.12630977721333,0.936258105287974,0.34243593645101,0.0797721589953364,0.684802919724823,0.262261207256992,0,0,0,0,0,0,0,0,0,0.47997726838022,0.68822784320151,0,0.430761996159075,0.430942465371778,0,0,0,0,0,0,0,0,0,10.4632907684227,6.2506827561904,2.61761871986899,11.1763982725893,17.7591826089196,3.88408282424923,0.377690453926732,0.101376931219515,0,0,0,0,0,0,0,0.167782606057736,2.90144856804538,1.00828139742739,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0.599902730993408,0.635351135365324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0.193952487167626,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0.324270453550071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,1.50791283939272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0.370389054739423,0,0,0,0.339956859987711,0.279902904647316,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0.120195449519969,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:12683325..12683329,+ | |||
}} |
Latest revision as of 01:23, 4 August 2015
Short description: | p@chr10:12683325..12683329, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:12683325..12683329, + |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.95e-14 | 9 |
alpha-beta T cell | 2.95e-14 | 9 |
immature T cell | 2.95e-14 | 9 |
mature T cell | 2.95e-14 | 9 |
immature alpha-beta T cell | 2.95e-14 | 9 |
T cell | 9.93e-12 | 11 |
pro-T cell | 9.93e-12 | 11 |
leukocyte | 1.41e-11 | 17 |
nongranular leukocyte | 1.41e-11 | 17 |
lymphoid lineage restricted progenitor cell | 8.85e-11 | 12 |
lymphocyte | 5.65e-10 | 13 |
common lymphoid progenitor | 5.65e-10 | 13 |
CD4-positive, alpha-beta T cell | 1.61e-09 | 8 |
regulatory T cell | 2.09e-09 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.09e-09 | 1 |
CD8-positive, alpha-beta T cell | 6.33e-09 | 1 |
multi-potent skeletal muscle stem cell | 1.05e-08 | 9 |
hematopoietic lineage restricted progenitor cell | 6.94e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.05e-08 | 9 |
striated muscle tissue | 1.05e-08 | 9 |
muscle tissue | 1.05e-08 | 9 |
multilaminar epithelium | 1.05e-08 | 9 |
epithelial vesicle | 1.05e-08 | 9 |
musculature | 1.05e-08 | 9 |
somite | 1.05e-08 | 9 |
myotome | 1.05e-08 | 9 |
presomitic mesoderm | 1.05e-08 | 9 |
presumptive segmental plate | 1.05e-08 | 9 |
dermomyotome | 1.05e-08 | 9 |
trunk paraxial mesoderm | 1.05e-08 | 9 |
musculature of body | 6.86e-08 | 10 |
dense mesenchyme tissue | 3.21e-07 | 11 |
paraxial mesoderm | 3.21e-07 | 11 |
presumptive paraxial mesoderm | 3.21e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 7.81e-25 | 3 |
muscle cancer | 7.81e-25 | 3 |
organ system cancer | 9.15e-13 | 6 |