FFCP PHASE1:Hg19::chr2:217362648..217362677,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6168 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10348 | |||
|TSSclassifier=strong | |||
|UniProt=P61513 | |||
|association_with_transcript=-234bp_to_ENST00000491306_5end | |||
|cluster_id=chr2:217362648..217362677,+ | |||
|coexpression_cluster_id=C166 | |||
|description=CAGE_peak_3_at_RPL37A_5end | |||
|id=chr2:217362648..217362677,+ | |||
|ontology_enrichment_celltype=CL:0002371!7.05e-15!591;CL:0000144!4.32e-14!625;CL:0000048!7.65e-13!430;CL:0000723!1.58e-12!436;CL:0000034!1.91e-12!444;CL:0000548!1.27e-11!679;CL:0000004!1.27e-11!679;CL:0000255!1.27e-11!679;CL:0000012!3.33e-11!682;CL:0000680!4.04e-11!57;CL:0000056!4.04e-11!57;CL:0000355!4.04e-11!57;CL:0000055!8.13e-11!180;CL:0000183!8.41e-11!59;CL:0000187!2.25e-10!54;CL:0000192!5.10e-10!42;CL:0000514!5.10e-10!42;CL:0000393!5.06e-09!60;CL:0000211!5.06e-09!60;CL:0000222!8.21e-09!119;CL:0000003!9.01e-08!722 | |||
|ontology_enrichment_celltype_v019=CL:0000235;3.67e-27;6!CL:0002619;2.99e-13;3!CL:0000148;1.86e-10;10!CL:0002593;1.64e-09;2!CL:0000840;1.68e-07;5!CL:0000147;2.21e-07;14!CL:0002567;6.31e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,3.64e-27,6;CL:0002619,3.21e-13,3;CL:0000839,3.11e-11,66;CL:0000557,5.10e-11,67;CL:0000148,1.39e-10,10;CL:0000541,1.39e-10,10;CL:0000766,4.92e-10,72;CL:0002194,1.27e-09,59;CL:0000576,1.27e-09,59;CL:0000040,1.27e-09,59;CL:0000559,1.27e-09,59;CL:0002593,2.31e-09,2;CL:0002009,3.20e-09,61;CL:0000763,1.12e-08,108;CL:0000049,1.12e-08,108;CL:0000840,1.72e-07,5;CL:0001029,1.72e-07,5;CL:0000147,1.81e-07,14;CL:0002567,6.33e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!1.78e-09!61;UBERON:0002036!1.78e-09!61;UBERON:0003082!1.78e-09!61;UBERON:0004290!7.53e-09!70;UBERON:0002385!9.45e-09!63;UBERON:0001015!9.45e-09!63;UBERON:0000383!9.45e-09!63;UBERON:0002204!2.22e-08!167;UBERON:0000914!6.73e-07!83;UBERON:0002329!6.73e-07!83;UBERON:0003077!6.73e-07!83;UBERON:0003059!6.73e-07!83;UBERON:0007282!6.73e-07!83;UBERON:0009618!6.73e-07!83;UBERON:0007285!6.73e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0002456;1.64e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,6.26e-11,167;UBERON:0002371,1.05e-10,76;UBERON:0001474,1.13e-09,82;UBERON:0002456,2.31e-09,2;UBERON:0002390,1.25e-08,98;UBERON:0003061,1.25e-08,98;UBERON:0004765,1.64e-08,90;UBERON:0002405,3.96e-08,93;UBERON:0003081,6.07e-08,203;UBERON:0003498,8.33e-08,5;UBERON:0005985,8.33e-08,5;UBERON:0002193,1.69e-07,108;UBERON:0001434,2.50e-07,100 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0.872338524100369,0,0,0.261185628199839,0.737201809504527,0.697801167972428,0,0,0,0,0,0,0.730310090387373,0.487932798790507,0.246242116153576,0,0.313454721478088,0,0.273748850145768,0.125542639594803,0.840547463227464,0.328402357799783,0.550975469195755,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,2.23915474239924,1.94336199611388,1.03030227053675,0,0.377875943688809,0,0,0,0,0,0.256160706529101,0,0,0,0,0.188242339542605,0,0,0.306083892370903,0,0,0.329851300186716,0,0.426224750532694,0.290209238628584,1.13477044938228,0,0,0,0.217188844705117,0.605399502633369,0,0,0,0,0.209658645508376,0.336985893439485,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25618263945135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.12786256184353,0,0,0.144846518960824,0,0,0.0945348171640679,0.221729397462564,0,0.196468613246569,0,0,9.08732702233113,9.40300581416043,10.2377629599526,0,0,0,0,0,0.347140501607594,0,0,0.825354125820202,0,0.516833518338658,0.35576626268671,0.33472061276467,0.402829317109147,0.760272105718513,0.488124115096339,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,0,0.24666754841716,0.622422070799533,0,0,0.756787138224657,0.576175924479999,0.234321431833797,0,0.570471821544449,0.149448680551801,0.352303495931295,0.323745888736263,0,0,0,0.103325781175765,0,0,0,0,0.505008341862199,0.250237039743928,0,0,0,0.45071417671979,0,0.358779271377724,0,0.635795703478686,0.600182192168805,0.515262646192195,0,0.18611685633159,0.675105328965065,0.584622030967192,0.504867548488229,0.644349290496095,0.161646056818812,0,0.503760491138201,0.169560592310488,0,0,0,0,0,0.232387885739037,0.207322110030741,0.504641701751257,0,0,0,0,0,1.44375896333917,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0.122988438543114,0.514703430895577,0.219500570817251,0,0,0.0925884451585296,0.651616610620649,0,0,0.115930404975077,0,0.577465791044295,0.462985512576611,0.190254152234598,0,0,8.12516120088411,20.8263795973922,7.72882043901387,0,0,0,0,0,0,1.47798971368783,1.05658120815871,0.621984346622316,0,0.25248486685276,1.39695367442772,3.4378958300245,0,3.4214489204541,0.514137463516618,1.50171528921959,1.71495859578347,0.336393253036082,0.87192013766656,0.7333828582095,0.646358578788889,0,0.845302752556,0,0,0.257207374262142,0,1.0656887160644,0.142977993658148,0,0,0.325736184293735,0.355391948742546,0,0.602878754119172,0,0,9.72990245129524,5.02257091432126,6.32501818449095,0.239624855491583,0,0,0.434343920002738,0.205476322550383,0.179060963239896,0,0,0,0,0.508189248444927,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0.157702415033935,0.234282829985426,0,0,0,0,0.184369168541703,0.434418072340414,0.979005787313703,0.343143423810856,0,0.215714200818617,0.106727557803444,0,0,0,0.248107807818777,0,0,0.512556597022804,0.511707249066704,0.160853921143607,2.96836132889982,0.154209693802656,0.177561725313127,0.246381468041427,0.519254429183621,0.232420756919918,0,0,0,0.229628896329213,0.182091168006717,0.655622074797121,0.902399225814824,0,0.784349769176855,0,0.105551628892876,0,0.510281115829547,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0.650756789328606,0.103041011647722,0,0,0,0.650060246036521,0,0,0.308097234229289,0.15350367472613,0,0.214840489736547,0.290033387828457,0.340906509664404,0.267096106940212,0.165284915360978,0,0.127612712494584,0,2.78907329578371,0,1.3940745403212,0.308033580176089,0,0.869932992075073,0.18532421910392,0.429374660225974,0.372158369359667,0,0.38126038784765,1.27948895655667,0.855877976067841,0,0.78494864019923,0.539617372749944,0.54907405947211,0.235624804691373,1.2130948894399,1.58510321173008,0,0.975267478179181,1.21856744815642,2.11300293513511,0.545999645631943,0.424216295861138,1.13008116620243,0,0.66343897524122,0,1.73632660280006,0.655894752046633,0.202910376962704,0,0,0.430234056612155,0.196498082026242,0.35667105148125,0.354761064070598,0,0,0.75894634753143,0.349934720244983,0.0962221127255121,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0.185803175125719,0,0,0,0,0,0.846694330895531,1.62310970137278,0,1.59764275323235,0.47003968731907,0,0.50787533340481,0,0.201799707191048,0,0,0.614481528616916,0.223676107892416,0,0.19538809540204,0.278406173895242,0,1.89318974933188,0,0,0.18714054040822,0.879049075631364,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0.246169610922139,1.86623752597084,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0,0,0,0.10893846351899,0,0,0,0.23056390438806,0.807818799687949,1.19512109114209,0.31900115973192,0,0,0,0.470940769185074,0,0,0.392125068635479,0.335643173951685,0.189753732724185,0.158936578980379,0.210998064528027,0,0.282706142867882,0.432777279484182,0,0.0884575645033392,0,0.296521128680622,0.86494757262552,1.14864144456001,0.134802265961354,0,0,0,0,2.91336455440911,0,0,0,0.252746318513952,0,0,0,0,0,0,0.284609546029793,0,0,0.195984794828755,0,0,0,0,0,0.0821154570532092,0,0,0,0.411125773940253,0,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| |||
|short_description=p3@RPL37A | |||
}} |
Latest revision as of 06:19, 20 September 2015
Short description: | p3@RPL37A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RPL37A_5end |
Coexpression cluster: | C166_Macrophage_Monocytederived_Dendritic_adipose_lymph_CD14_lung |
Association with transcript: | -234bp_to_ENST00000491306_5end |
EntrezGene: | RPL37A |
HGNC: | 10348 |
UniProt: | P61513 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 3.64e-27 | 6 |
adult endothelial progenitor cell | 3.21e-13 | 3 |
myeloid lineage restricted progenitor cell | 3.11e-11 | 66 |
granulocyte monocyte progenitor cell | 5.10e-11 | 67 |
melanocyte | 1.39e-10 | 10 |
melanoblast | 1.39e-10 | 10 |
myeloid leukocyte | 4.92e-10 | 72 |
monopoietic cell | 1.27e-09 | 59 |
monocyte | 1.27e-09 | 59 |
monoblast | 1.27e-09 | 59 |
promonocyte | 1.27e-09 | 59 |
smooth muscle cell of the internal thoracic artery | 2.31e-09 | 2 |
macrophage dendritic cell progenitor | 3.20e-09 | 61 |
myeloid cell | 1.12e-08 | 108 |
common myeloid progenitor | 1.12e-08 | 108 |
immature conventional dendritic cell | 1.72e-07 | 5 |
common dendritic progenitor | 1.72e-07 | 5 |
pigment cell | 1.81e-07 | 14 |
light melanocyte | 6.33e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 6.26e-11 | 167 |
bone marrow | 1.05e-10 | 76 |
bone element | 1.13e-09 | 82 |
internal thoracic artery | 2.31e-09 | 2 |
hematopoietic system | 1.25e-08 | 98 |
blood island | 1.25e-08 | 98 |
skeletal element | 1.64e-08 | 90 |
immune system | 3.96e-08 | 93 |
lateral plate mesoderm | 6.07e-08 | 203 |
heart blood vessel | 8.33e-08 | 5 |
coronary vessel | 8.33e-08 | 5 |
hemolymphoid system | 1.69e-07 | 108 |
skeletal system | 2.50e-07 | 100 |