FFCP PHASE1:Hg19::chr2:63815628..63815657,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51057 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28027 | |||
|TSSclassifier=strong | |||
|UniProt=F8WBT2 | |||
|association_with_transcript=0bp_to_ENST00000409562,ENST00000409835,ENST00000417238,ENST00000484073_5end | |||
|cluster_id=chr2:63815628..63815657,- | |||
|description=CAGE_peak_6_at_WDPCP_5end | |||
|id=chr2:63815628..63815657,- | |||
|ontology_enrichment_celltype=CL:0000738!4.93e-13!140;CL:0002087!1.13e-12!119;CL:0002031!2.77e-12!124;CL:0000037!4.64e-10!172;CL:0000566!4.64e-10!172;CL:0000988!7.74e-10!182;CL:0000838!9.89e-10!52;CL:0000542!1.68e-09!53;CL:0000051!1.68e-09!53;CL:0002032!3.52e-08!165;CL:0000837!3.52e-08!165 | |||
|ontology_enrichment_celltype_v019=CL:0000236;3.86e-10;13!CL:0000542;1.20e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.93e-10,136;CL:0002031,1.22e-09,120;CL:0002087,1.84e-09,115;CL:0000838,2.18e-09,52;CL:0000236,4.18e-09,14;CL:0000542,4.71e-09,53;CL:0000051,4.71e-09,53;CL:0000037,6.27e-09,168;CL:0000988,3.40e-08,177;CL:0002032,7.87e-07,161;CL:0000837,7.87e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000051;1.20e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.19e-14!115;UBERON:0001049!5.66e-09!57;UBERON:0005068!5.66e-09!57;UBERON:0006241!5.66e-09!57;UBERON:0007135!5.66e-09!57;UBERON:0002346!6.06e-08!90;UBERON:0003075!1.91e-07!86;UBERON:0007284!1.91e-07!86;UBERON:0002780!2.49e-07!41;UBERON:0001890!2.49e-07!41;UBERON:0006240!2.49e-07!41;UBERON:0000955!4.03e-07!69;UBERON:0006238!4.03e-07!69;UBERON:0002616!6.32e-07!59;UBERON:0002193!8.87e-07!112;UBERON:0003080!9.18e-07!42;UBERON:0002390!9.19e-07!102;UBERON:0003061!9.19e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;3.72e-09;53!UBERON:0002616;3.72e-09;53!UBERON:0002780;3.08e-08;41!UBERON:0001890;3.08e-08;41!UBERON:0001893;6.93e-08;34!UBERON:0002791;1.22e-07;32!UBERON:0001869;2.90e-07;32!UBERON:0003528;5.97e-07;34!UBERON:0002020;5.97e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.38e-15,114;UBERON:0001049,2.40e-13,56;UBERON:0005068,2.40e-13,56;UBERON:0006241,2.40e-13,56;UBERON:0007135,2.40e-13,56;UBERON:0000073,2.25e-12,53;UBERON:0002616,2.25e-12,53;UBERON:0002780,1.27e-10,41;UBERON:0001890,1.27e-10,41;UBERON:0003080,1.27e-10,41;UBERON:0006240,1.27e-10,41;UBERON:0001893,1.09e-09,34;UBERON:0003075,7.00e-09,82;UBERON:0007284,7.00e-09,82;UBERON:0003528,7.21e-09,34;UBERON:0002020,7.21e-09,34;UBERON:0002346,1.06e-08,86;UBERON:0002791,1.37e-08,32;UBERON:0001869,1.61e-08,32;UBERON:0000955,3.77e-08,68;UBERON:0006238,3.77e-08,68;UBERON:0001017,2.96e-07,81 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.986680828671798,0,0.893922188854576,0,0,0,0.261185628199839,0,0,0.873765488520689,0.263766978228454,0.495065411840187,0.331397375727916,0,0,0,0.487932798790507,0.369363174230364,0,0,0,1.36874425072884,0.125542639594803,1.37544130346312,0.821005894499457,1.02324015707783,0,0.767658796194425,1.23852898652861,0,0.30120591877825,0,0.387336002901508,0.142169232487422,3.81680571135301,0.553995408531877,1.20326668482085,1.95309783644267,0.447830948479849,1.29557466407592,2.06060454107349,0.581592955118259,0,0.485168122375632,0.929716147622738,0.411167888021826,0.929119112685311,0.863077176966451,0.512321413058201,0.47296445977717,0.689491361473237,1.29096936716765,1.35426486594342,0.376484679085209,0.545812300115692,0.674170453335254,0.306083892370903,1.28371610830437,1.91801137739712,1.64925650093358,0.797854630486527,0,0.290209238628584,1.13477044938228,0,0.502497330513487,1.0429658368404,0.434377689410233,0,0,0.316462387440884,0.845021145247767,0.425208599930087,0.628975936525128,1.12328631146495,1.95229960693958,0.964353520182481,0.855038231223746,0.39783335439818,0.730656615058536,3.51992488922645,2.73069305631066,0.889509253863555,1.70692089026603,3.2031678962881,2.29900975981793,1.32208974556972,2.86216126360609,3.98449078376614,4.11066032559657,4.20500550937752,5.28685314316103,1.68152568894461,0.526768169550154,1.7703879310245,0.393010762749165,1.64481199199607,0.501559486172034,2.60737813306872,0.946895611469467,0,0.557052284425868,0.294605907474837,0.664601683750863,0.270803863765016,0.384273959177026,0,0.164437904603676,1.10540007114339,0.579606171470105,2.22429844743091,1.60524496853828,4.18142095219907,0.453237370790265,2.68254345521345,1.37450978193052,1.51811815211702,0.637130828648193,1.30216690771284,0.950452044448374,0.602300476311091,0.383959833463255,1.24930726552346,0.947109008176067,1.64225599384209,1.20964045934839,1.60464117470104,1.88271725047639,0,0,0.12786256184353,0,0,0.289693037921647,0.795285947051099,0.486634870302636,0.661743720148475,0.443458794925128,0.527008714158756,1.11332214173056,0,0.370784442784429,1.9472843619281,2.08955684759121,1.46253756570752,2.62339686735876,2.85997455390064,1.11437250398869,0.993812036833525,0,0,0.56530794192401,1.25849830862972,0,0.417989933073621,1.29208379584664,0.35576626268671,0.66944122552934,0,0,0.732186172644509,0.367663080345869,0,1.16089646769304,1.34717623575702,0.563057402416611,0,0,0.916008719652036,0,0,0,0,0.12663051166458,0.397227542439656,0.286836620748814,0,0.560677600142307,0,0.74000264525148,0,0.134710672069688,0.490385709340376,0,0.576175924479999,0,0,0,0.298897361103602,0,0,0.140450806702248,0.408308342509787,0.491337269247072,0.206651562351531,0,0.494533858557114,0,0,0.505008341862199,0.250237039743928,1.38532057742091,1.31693286264251,0.919463387397059,0.600952235626387,0.453728732640084,0.717558542755448,0.427114777637135,1.48352330811693,0.300091096084402,0.309157587715317,1.03056216018252,1.48893485065272,1.0126579934476,0.194874010322397,0.504867548488229,0.460249493211497,0.323292113637624,0.355009592516614,0.10075209822764,0.169560592310488,0,0,0.286804595389004,0,0.132529768321485,0,0.207322110030741,0,0,0,0,0,0.928735856063958,0.721879481669586,0.236613600079688,0.337169380156203,0,0.110293972732394,0.653638332277218,0,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,1.7658523976586,0,0.514703430895577,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0.469634776943287,0.866198686566443,0.462985512576611,1.14152491340759,0,0.858486162094873,1.23108503043699,1.40402559083543,0.891786973732369,0,0.16798212819886,0,0,0,0.383382679165211,3.94130590316755,0.44024217006613,1.86595303986695,1.29707958075265,1.13618190083742,0.380987365753014,0.381988425558278,0,0,0.308482478109971,0,0,0,0.43596006883328,0.07333828582095,1.03417372606222,0,0,0.531876233169741,0,0.514414748524284,0,0,0,0.542621605391443,0,0.325736184293735,0,0.791951872933429,0.301439377059586,0,0.399891964728228,0,1.00451418286425,0,0.479249710983165,2.29723871668228,0,0.579125226670317,0.410952645100767,0.537182889719687,1.00876629594175,1.37921532141349,1.2937654491571,0.898401253958239,0.254094624222463,0,0,0.670065061337395,0,0.749007023947182,0,0,1.2269149171914,0,0,0.207970861530807,0,0.157702415033935,0.117141414992713,0,2.27407504055985,2.0694614258501,0,0.553107505625109,0.60818530127658,0.195801157462741,0,2.27444828735176,0.862856803274467,1.60091336705167,0,0,0.30239029332968,0,1.07423381301644,0.561320188866147,0.384417447767103,0,0.965123526861645,0,0.154209693802656,0.177561725313127,0.246381468041427,0,0.232420756919918,0,0,0.184161977871793,0,0.182091168006717,0.262248829918848,0,0.231046011313244,0.784349769176855,0,0,0,0.510281115829547,0.215915916102139,0,0,0.501689773854853,0,0,0,0,0,0.256450125116389,0.328014645699706,0.650756789328606,0.824328093181778,0.640986253728404,0.247528499761764,0,0.650060246036521,0,0.290012154876366,0.308097234229289,0.307007349452259,0.413509717453592,0.322260734604821,0.580066775656914,0.852266274161009,0.178064071293475,0,0,0.638063562472921,0.10115778085555,0,0.31481234683064,0,0,0,0.869932992075073,0,0.286249773483982,0.372158369359667,0.316379424718726,0.38126038784765,0.255897791311334,0.42793898803392,0.318203247925937,0.78494864019923,0.719489830333259,0.274537029736055,0.235624804691373,0,0,0,0,0,0,0,0.141405431953713,0,1.10273068709225,0,0,0.578775534266688,0,0,0.30982349809975,0,0,0.196498082026242,0,0.709522128141196,0.422215270595328,0,0.379473173765715,0,0,0,0,0.753150406214233,0,0,0,0.229723400206959,0,0,0.569647187174163,1.19115887728894,0.411362273086194,0.648473311192717,0,0.79312517629427,1.06824071127473,1.92495971052672,0,0.371606350251437,1.00988449083511,1.13826949357463,0.478278818186467,0.199579371432817,1.1490322207942,1.48171507906718,0.324621940274555,2.80797178113459,2.28234679033192,0,0,0.169291777801603,1.1241165257259,0,0,0,1.22896305723383,0.894704431569664,0.834245708559542,0.976940477010201,0.278406173895242,0,0,0.99921590399346,0,0.18714054040822,1.75809815126273,1.21360521749513,1.00299045849731,0.568272293612826,0.23874448473769,0,0,0,2.81338832821025,0.890469640183247,0.494411622680279,1.05562704063997,1.19548792950642,1.65770349318689,0.251932747854276,0.102268682502155,0.615424027305347,0.311039587661807,0.359473404589307,0,0.511572370226872,1.28236427328014,0,2.22273980289274,0.969332746095218,0.649376687132959,1.99613798001194,1.30213880542617,0.524759999977174,0,0.341380344856499,0.254253650292766,0,0.689486746482929,0.583209226766509,0.347249989866585,0,2.29133233388275,1.52581736317083,3.64911557773041,1.18219047581419,0.658156191461918,0.21787692703798,0.278847488557207,1.76985594558733,0.683652335082007,0.23056390438806,0,0.217294743844016,1.91400695839152,0.0915975934018623,1.06606955203727,0,0.784901281975124,0.664846727600626,0,0,0.335643173951685,0.37950746544837,0.476809736941136,0.210998064528027,0.652931232636591,0,0.865554558968364,0,0.619202951523374,2.4441205797345,0.593042257361244,0.86494757262552,0.939797545549098,1.28062152663286,2.40773294189637,1.40558667435203,0.182454789215666,0.586993856796269,0.242780379534093,1.97292201424695,0,2.44858209304392,1.20054501294127,0.150323419414493,0.311064574191741,0.664653872707185,0.661983911750998,0.627865836814451,0,1.42304773014896,0.693373365065693,0,0.489961987071888,0.34823682632161,0.873633341210151,0.859930162358083,0.677294319023596,0.0730893170861856,0.164230914106418,0.581934098930517,0.970817393606503,1.12990370390266,0.822251547880505,0.397429223405979,0.823040347426423,0.586654148204409,0.961905843018405,0.640358984218058,0.599428828746391,0.576361668616424,0.80175617316141,0.686379991447858,0,0.745515213392595,0.235694034616795,0.543616824294456,0.523014231561666,0.407992870545287,0.577901179803038,0.600420288709789,2.60120219894787,2.55493176133945,0.429765441419957,0.525774708558629,2.23425921017803,0.916641696046735,2.87149209830726,0.399358000997982,0.858452096273142,0.446342914883745,1.61240333968143,0.360299883542404,0,0.472699093843342,0.576911008668165,0.539228350833479,0.196854963029498,0.169346664131569,0.795229689809303,1.90684768556206,0,0.137539436597234,0,0.449947783103001,0.77380195455795,1.45798935979259,0.335434687599266,0.945668487590378,1.20645552710496,0.528001682597033,0.717149357331379,0,0,1.32418394073086,0.76280561296425,0,0,0,2.39460383124975,0.246277562248017,0.851940108927109,0.226624183040251,0,0,0.775697738169303,2.11572162788304,1.88195521672762,1.40963004463334,0.747511887973863,0.314408610199332,1.65695622138878,0.496166021811951,0.592834895693833,0.487170393523584,0,0.544017803369474,1.2534494701135,0.919036730290385,0.327872630709804,0.942324577501406,0,0.854183854313742,3.004582336956,1.14681839138014,1.10929051536852,1.17983165588629,0.830091809617385,0.37494122388632,0.758245587708239,1.99825733481477,0,0.936669811613763,0.434763085832475,0.149254802886874,0.701139929541673,0,0.189403005275089,0.754703705257725,0,0.457680136793847,0.907385542579434,0.621748802331122,0.147855149989634,0.477890301491107,1.34940933649081,0.776314784381297,0,0.797525143673985,0.521745061811734,0.450772826991655,0.380805212168795,0,0.545545977607678,0.322231671127465,0,0.398095888698616,0.400027764663154,0.343395705182793,0.336749488765919,0,1.54095864325843,0.643324774124777,0,0.226705925512272,0.231522474323834,0.244736704506468,0.537266523244462,0,0.438568099157414,0.883445729729405,0.38582807654183,0,1.28120759293973,0,0,2.21213497842769,0.779441235357554,0.398594520940089,0.327130788511688,0.327609848846413,0,0,1.19992437512958,0.640150378164845,0.688859918643263,1.13503190713367,0.736423801007363,0.139879507719444,0.622077260032973,0.76736622782191,0.539124056983409,0.471797825567689,1.85656384926424,0.509197589862076,0.850299680406731,1.98297222814403,0,0.318004350653419,2.28699060503635,0,0.352675943690684,0,1.86264752779733,0,3.03304332208587,1.43581454968528,1.00828678488687,1.10651603942749,0.484426936895553,0,0.0981477185010256,0.235939446695481,0.733714394086716,0.231051332300676,0.762764190934334,1.3807198521202,0.596748666348824,1.88025820873143,1.21023041222112,1.56302802246618,0.261906694481422,0.327543835020193,0.591424344868181,1.41828927698629,0.781078098613847,2.68692835451539,1.20490039368423,2.7348740450911,1.09651553371436,1.98484471355718,0.703484977438482,1.40538670403555,1.07140367175657,1.3451348888753,0,0.91064876540519,0.975726071789027,0.460935950223117,0.685952037749674,0.883606528698812,0.789273282754189,0.709163045303809,0.222462803784138,1.56986185701028,1.72827148907602,0.840816489941367,2.73947616152849,1.07963795609311,0.9555033757741,1.57248397188644,0.790068058663633,0.464965701472501,0.869291361512897,0,0.828864656652147,0.85359238546975,1.38251932362818,0.860454717640555,0.473328002922261,0.511280428554946,0,0.4582137370881,0,0,0.335566295393377,0.294450700845729,0.365753774946808,0,0.513314034281235,1.1598144313382,1.94284397223656,0,0.596852325484105,0.83244063544298,0.33883824611688,0.769583617218004,0.754814217833368,0.694567422971502,1.74847648403166,0.470317296361523,1.71603825227734,1.17838273550813,0.981542335574726,2.37637120261669,1.6906229103336,0.509781344063451,1.4097587696978,1.93373663920732,0.599646935549574,0.535661815816973,0.352894871715692,0.160482733378337,0,2.2936464170227,1.72007499781742,1.10440093535229,1.01987235286372,3.49080552272302,1.5870805215462,0.743990036333503,0.924351257262837,1.29787968637137,0,0,0.760191006068622,0.101988829741982,0.534434810531121,0.0918948995348449,0,0.833565680400634,1.07185652062471,0.829169439458779,2.37895890482359,1.27940389140589,1.1903221573187,3.1648565819643,2.73128742901775,0.33639558774184,1.01835453245064,1.0105859447911,0.870866991587845,1.02669990325584,1.27968900727716,1.14755528628282,1.66330178273007,0.569822880276821,0.533636729388577,0,0.0898252021065869,0,1.34465588601153,1.62758471326295,1.33151354837103,1.20764276154616,0.641136984606466 | |||
|short_description=p6@WDPCP | |||
}} |
Latest revision as of 22:30, 17 September 2015
Short description: | p6@WDPCP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_WDPCP_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000409562, ENST00000409835, ENST00000417238, ENST00000484073_5end |
EntrezGene: | WDPCP |
HGNC: | 28027 |
UniProt: | F8WBT2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.93e-10 | 136 |
hematopoietic lineage restricted progenitor cell | 1.22e-09 | 120 |
nongranular leukocyte | 1.84e-09 | 115 |
lymphoid lineage restricted progenitor cell | 2.18e-09 | 52 |
B cell | 4.18e-09 | 14 |
lymphocyte | 4.71e-09 | 53 |
common lymphoid progenitor | 4.71e-09 | 53 |
hematopoietic stem cell | 6.27e-09 | 168 |
hematopoietic cell | 3.40e-08 | 177 |
hematopoietic oligopotent progenitor cell | 7.87e-07 | 161 |
hematopoietic multipotent progenitor cell | 7.87e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
adult organism | 9.38e-15 | 114 |
neural tube | 2.40e-13 | 56 |
neural rod | 2.40e-13 | 56 |
future spinal cord | 2.40e-13 | 56 |
neural keel | 2.40e-13 | 56 |
regional part of nervous system | 2.25e-12 | 53 |
regional part of brain | 2.25e-12 | 53 |
regional part of forebrain | 1.27e-10 | 41 |
forebrain | 1.27e-10 | 41 |
anterior neural tube | 1.27e-10 | 41 |
future forebrain | 1.27e-10 | 41 |
telencephalon | 1.09e-09 | 34 |
neural plate | 7.00e-09 | 82 |
presumptive neural plate | 7.00e-09 | 82 |
brain grey matter | 7.21e-09 | 34 |
gray matter | 7.21e-09 | 34 |
neurectoderm | 1.06e-08 | 86 |
regional part of telencephalon | 1.37e-08 | 32 |
cerebral hemisphere | 1.61e-08 | 32 |
brain | 3.77e-08 | 68 |
future brain | 3.77e-08 | 68 |
central nervous system | 2.96e-07 | 81 |