FFCP PHASE1:Mm9::chr11:39607771..39607787,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=16|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:39607771..39607787,-|id=chr11:39607771..39607787,-|ontology_enrichment_celltype=CL:0000117!2.97e-08!23;CL:0000337!2.97e-08!23;CL:0000540!9.38e-08!33;CL:0000047!9.38e-08!33;CL:0000031!9.38e-08!33;CL:0000404!9.38e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,1.81e-12,23;CL:0000337,1.81e-12,23;CL:0000540,4.28e-11,33;CL:0000047,4.28e-11,33;CL:0000031,4.28e-11,33;CL:0000404,4.28e-11,33;CL:0000393,1.33e-08,39;CL:0000211,1.33e-08,39;CL:0002319,2.39e-07,43;CL:0000221,4.50e-07,44;CL:0000133,4.50e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!5.20e-07!73;UBERON:0005743!5.20e-07!73;UBERON:0000073!7.26e-07!75;UBERON:0001016!7.26e-07!75;UBERON:0004121!8.98e-07!102;UBERON:0000924!8.98e-07!102;UBERON:0006601!8.98e-07!102|ontology_enrichment_uberon_v019_2=UBERON:0002420,7.52e-10,8;UBERON:0007245,7.52e-10,8;UBERON:0010009,7.52e-10,8;UBERON:0010011,7.52e-10,8;UBERON:0000454,7.52e-10,8;UBERON:0001017,2.21e-09,73;UBERON:0002346,2.96e-09,64;UBERON:0003075,2.96e-09,64;UBERON:0007284,2.96e-09,64;UBERON:0004121,3.84e-09,95;UBERON:0000924,3.84e-09,95;UBERON:0006601,3.84e-09,95;UBERON:0001016,6.32e-09,75;UBERON:0000073,1.19e-07,54;UBERON:0000369,2.39e-07,5;UBERON:0002435,2.39e-07,5;UBERON:0000204,2.39e-07,5;UBERON:0010082,2.39e-07,5;UBERON:0010371,2.92e-07,73;UBERON:0002240,8.39e-07,6;UBERON:0005174,8.39e-07,6;UBERON:0001137,8.39e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.43937983461316,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0,0,0,0,1.42825492201902,0.883474163806454,0,0.0958454710182364,0,1.10115880999389,5.49055553766307,1.68967186581868,3.29715719325485,2.65314166446988,2.6045668527838,1.3959149950069,1.12552522006336,1.37518422999129,4.12480019663135,6.40672563595963,5.96478226640962,0.151452386666368,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0.628340120440365,0.255457055208591,0,0,0,5.99162557619291,1.83000241127451,1.13088916901578,1.39059456153821,0.255715457330331,3.53239675751252,5.02947915510049,0.101839363850316,0,0,5.47148825304832,0.260240885925407,0.689706313300419,1.62055916824814,0.753524089178575,1.29269348387523,2.0498195245576,0.562210347358373,15.78090561508,0,0.378212160335639,0.175951124163949,0.43839146485515,0,1.0447564995665,0.61734640922383,0,0,0,0,0.207125772535502,0.234526059981096,0,0.473489471170421,0,0.154267112887378,0.232533944750408,0,0,0,0.164167464079095,0,0,0,0,2.52347938276953,0.205809224758569,0,0.264450566663544,0.213288250535234,0.232236671860439,0,0,0.444756087689741,0.380451252225118,0.474529061544512,0.988193728344065,1.50801125280162,0.596869416123452,0.974820435595601,2.69645822596266,0.864552199498777,0.199141273254367,0.189667900953082,0,0,0,0,0.0701358198903186,0.252946148497029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40825884981688,3.16471553798949,0,0,0,0,6.46270193198397,0,1.55959071857676,0.283076530788832,0,1.16902343164525,0.790575555893047,0.321321316421807,0,0,0,0,0,0.242780636154981,0,0,0,0.307435147943927,0.775284879504663,0.363533729477506,0,0.948110273807448,0,0,0,0,0.129358683782755,0,0,0.891844088010353,0.164549020602121,0,0,0,0,0,0,0,0.119372344003136,0,1.1659233465194,3.15223013417866,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.216010681643603,0.209088296014469,0.218362563746178,0.809186078308924,0.330613822901344,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.410843828659309,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0.515559547031063,0,0,0,0,0,0,0.207574695168353,4.78829848081237,2.56100408631201,0.729320151204882,0.628839487883947,0.367687016900028,2.00022055021454,2.06035057238894,0.962757628775446,2.27427490587418,2.78827229879264,1.69763707247469,1.591905626988,1.72867911493147,1.43588672389033,2.85776214769844,1.27472758539341,1.35036454324594,1.23625770240992,1.03039244094078,2.05721551431249,1.06485483695602,1.1921809497366,2.0348498328526,1.69396884747595,1.26921911837515,0.914639864363863,1.57841826862706,1.49384525230448,2.24456908663095,1.18635018124174,2.06859412988683,0,1.54936841185966,1.35034627686799,0.499621155875892,0.935726433781634,0.214871054048298,0.191288332068843,0.220591419119515,0|short_description=p@chr11:39607771..39607787,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=16 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:39607771..39607787,- | |||
|description=CAGE_peak_at_chr11:39607771..39607787,- | |||
|id=chr11:39607771..39607787,- | |||
|ontology_enrichment_celltype=CL:0000117!2.97e-08!23;CL:0000337!2.97e-08!23;CL:0000540!9.38e-08!33;CL:0000047!9.38e-08!33;CL:0000031!9.38e-08!33;CL:0000404!9.38e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.81e-12,23;CL:0000337,1.81e-12,23;CL:0000540,4.28e-11,33;CL:0000047,4.28e-11,33;CL:0000031,4.28e-11,33;CL:0000404,4.28e-11,33;CL:0000393,1.33e-08,39;CL:0000211,1.33e-08,39;CL:0002319,2.39e-07,43;CL:0000221,4.50e-07,44;CL:0000133,4.50e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.20e-07!73;UBERON:0005743!5.20e-07!73;UBERON:0000073!7.26e-07!75;UBERON:0001016!7.26e-07!75;UBERON:0004121!8.98e-07!102;UBERON:0000924!8.98e-07!102;UBERON:0006601!8.98e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002420,7.52e-10,8;UBERON:0007245,7.52e-10,8;UBERON:0010009,7.52e-10,8;UBERON:0010011,7.52e-10,8;UBERON:0000454,7.52e-10,8;UBERON:0001017,2.21e-09,73;UBERON:0002346,2.96e-09,64;UBERON:0003075,2.96e-09,64;UBERON:0007284,2.96e-09,64;UBERON:0004121,3.84e-09,95;UBERON:0000924,3.84e-09,95;UBERON:0006601,3.84e-09,95;UBERON:0001016,6.32e-09,75;UBERON:0000073,1.19e-07,54;UBERON:0000369,2.39e-07,5;UBERON:0002435,2.39e-07,5;UBERON:0000204,2.39e-07,5;UBERON:0010082,2.39e-07,5;UBERON:0010371,2.92e-07,73;UBERON:0002240,8.39e-07,6;UBERON:0005174,8.39e-07,6;UBERON:0001137,8.39e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.43937983461316,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0,0,0,0,1.42825492201902,0.883474163806454,0,0.0958454710182364,0,1.10115880999389,5.49055553766307,1.68967186581868,3.29715719325485,2.65314166446988,2.6045668527838,1.3959149950069,1.12552522006336,1.37518422999129,4.12480019663135,6.40672563595963,5.96478226640962,0.151452386666368,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0.628340120440365,0.255457055208591,0,0,0,5.99162557619291,1.83000241127451,1.13088916901578,1.39059456153821,0.255715457330331,3.53239675751252,5.02947915510049,0.101839363850316,0,0,5.47148825304832,0.260240885925407,0.689706313300419,1.62055916824814,0.753524089178575,1.29269348387523,2.0498195245576,0.562210347358373,15.78090561508,0,0.378212160335639,0.175951124163949,0.43839146485515,0,1.0447564995665,0.61734640922383,0,0,0,0,0.207125772535502,0.234526059981096,0,0.473489471170421,0,0.154267112887378,0.232533944750408,0,0,0,0.164167464079095,0,0,0,0,2.52347938276953,0.205809224758569,0,0.264450566663544,0.213288250535234,0.232236671860439,0,0,0.444756087689741,0.380451252225118,0.474529061544512,0.988193728344065,1.50801125280162,0.596869416123452,0.974820435595601,2.69645822596266,0.864552199498777,0.199141273254367,0.189667900953082,0,0,0,0,0.0701358198903186,0.252946148497029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40825884981688,3.16471553798949,0,0,0,0,6.46270193198397,0,1.55959071857676,0.283076530788832,0,1.16902343164525,0.790575555893047,0.321321316421807,0,0,0,0,0,0.242780636154981,0,0,0,0.307435147943927,0.775284879504663,0.363533729477506,0,0.948110273807448,0,0,0,0,0.129358683782755,0,0,0.891844088010353,0.164549020602121,0,0,0,0,0,0,0,0.119372344003136,0,1.1659233465194,3.15223013417866,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.216010681643603,0.209088296014469,0.218362563746178,0.809186078308924,0.330613822901344,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.410843828659309,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0.515559547031063,0,0,0,0,0,0,0.207574695168353,4.78829848081237,2.56100408631201,0.729320151204882,0.628839487883947,0.367687016900028,2.00022055021454,2.06035057238894,0.962757628775446,2.27427490587418,2.78827229879264,1.69763707247469,1.591905626988,1.72867911493147,1.43588672389033,2.85776214769844,1.27472758539341,1.35036454324594,1.23625770240992,1.03039244094078,2.05721551431249,1.06485483695602,1.1921809497366,2.0348498328526,1.69396884747595,1.26921911837515,0.914639864363863,1.57841826862706,1.49384525230448,2.24456908663095,1.18635018124174,2.06859412988683,0,1.54936841185966,1.35034627686799,0.499621155875892,0.935726433781634,0.214871054048298,0.191288332068843,0.220591419119515,0 | |||
|short_description=p@chr11:39607771..39607787,- | |||
}} |
Latest revision as of 21:27, 5 August 2015
Short description: | p@chr11:39607771..39607787, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:39607771..39607787, - |
Coexpression cluster: | MCL_coexpression_mm9:16 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.81e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.81e-12 | 23 |
neuron | 4.28e-11 | 33 |
neuronal stem cell | 4.28e-11 | 33 |
neuroblast | 4.28e-11 | 33 |
electrically signaling cell | 4.28e-11 | 33 |
electrically responsive cell | 1.33e-08 | 39 |
electrically active cell | 1.33e-08 | 39 |
neural cell | 2.39e-07 | 43 |
ectodermal cell | 4.50e-07 | 44 |
neurectodermal cell | 4.50e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
basal ganglion | 7.52e-10 | 8 |
nuclear complex of neuraxis | 7.52e-10 | 8 |
aggregate regional part of brain | 7.52e-10 | 8 |
collection of basal ganglia | 7.52e-10 | 8 |
cerebral subcortex | 7.52e-10 | 8 |
central nervous system | 2.21e-09 | 73 |
neurectoderm | 2.96e-09 | 64 |
neural plate | 2.96e-09 | 64 |
presumptive neural plate | 2.96e-09 | 64 |
ectoderm-derived structure | 3.84e-09 | 95 |
ectoderm | 3.84e-09 | 95 |
presumptive ectoderm | 3.84e-09 | 95 |
nervous system | 6.32e-09 | 75 |
regional part of nervous system | 1.19e-07 | 54 |
corpus striatum | 2.39e-07 | 5 |
striatum | 2.39e-07 | 5 |
ventral part of telencephalon | 2.39e-07 | 5 |
future corpus striatum | 2.39e-07 | 5 |
ecto-epithelium | 2.92e-07 | 73 |
spinal cord | 8.39e-07 | 6 |
dorsal region element | 8.39e-07 | 6 |
dorsum | 8.39e-07 | 6 |