FFCP PHASE1:Hg19::chr9:37667978..37668028,+: Difference between revisions
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|id=chr9:37667978..37668028,+
|short_description=p2@FRMPD1
|description=CAGE_peak_2_at_FRMPD1_5end
|association_with_transcript=0bp_to_ENST00000539465,uc004aah.1_5e...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22844 | |EntrezGene=22844 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29159 | |HGNC=29159 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000539465,uc004aah.1_5end | |||
|cluster_id=chr9:37667978..37668028,+ | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_2_at_FRMPD1_5end | |||
|id=chr9:37667978..37668028,+ | |||
|ontology_enrichment_celltype=CL:0000242!2.48e-08!2 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.83e-14;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;3.79e-11;4!DOID:1325;6.39e-07;7!DOID:3904;6.39e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,3.79e-11,4;DOID:1325,6.39e-07,7;DOID:3904,6.39e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0003296!5.55e-33!4;UBERON:0010133!5.55e-33!4;UBERON:0001905!4.49e-30!2;UBERON:0002757!4.49e-30!2;UBERON:0010134!4.49e-30!2;UBERON:0002784!4.49e-30!2;UBERON:0005408!4.49e-30!2;UBERON:0001899!4.49e-30!2;UBERON:0001894!3.63e-19!7;UBERON:0006222!3.63e-19!7;UBERON:0002171!1.34e-15!1;UBERON:0006518!1.34e-15!1;UBERON:0008949!1.34e-15!1;UBERON:0000101!1.34e-15!1;UBERON:0002167!1.34e-15!1;UBERON:0002336!2.75e-15!1;UBERON:0001018!2.75e-15!1;UBERON:0002473!2.75e-15!1;UBERON:0005340!2.75e-15!1;UBERON:0002316!2.75e-15!1;UBERON:0003544!2.75e-15!1;UBERON:0001020!2.75e-15!1;UBERON:0005970!2.75e-15!1;UBERON:0002437!2.75e-15!1;UBERON:0000966!2.25e-12!5;UBERON:0005388!2.25e-12!5;UBERON:0001802!2.25e-12!5;UBERON:0000970!9.83e-12!20;UBERON:0002104!3.45e-11!21;UBERON:0003056!8.78e-11!61;UBERON:0000020!3.08e-10!23;UBERON:0001032!8.02e-10!24;UBERON:0004456!8.02e-10!24;UBERON:0003075!8.58e-10!86;UBERON:0007284!8.58e-10!86;UBERON:0002346!2.49e-09!90;UBERON:0000073!1.11e-08!94;UBERON:0001016!1.11e-08!94;UBERON:0002360!1.73e-08!2;UBERON:0000094!1.73e-08!2;UBERON:0007645!1.73e-08!2;UBERON:0000007!2.15e-08!2;UBERON:0005162!2.67e-08!2;UBERON:0000122!2.67e-08!2;UBERON:0005743!1.91e-07!86;UBERON:0000019!2.48e-07!19;UBERON:0000047!2.48e-07!19;UBERON:0004088!2.48e-07!19;UBERON:0003072!2.48e-07!19;UBERON:0003071!2.48e-07!19;UBERON:0004128!2.48e-07!19;UBERON:0007023!3.29e-07!115;UBERON:0004121!3.40e-07!169;UBERON:0000924!5.26e-07!173;UBERON:0006601!5.26e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.05e-79;2!UBERON:0002757;1.05e-79;2!UBERON:0010134;1.05e-79;2!UBERON:0005408;1.05e-79;2!UBERON:0001899;1.05e-79;2!UBERON:0003296;1.48e-40;4!UBERON:0010133;1.48e-40;4!UBERON:0002784;1.48e-40;4!UBERON:0001894;1.02e-23;7!UBERON:0000966;3.22e-09;5!UBERON:0005388;3.22e-09;5!UBERON:0001802;3.22e-09;5!UBERON:0000970;6.17e-09;20!UBERON:0002104;1.48e-08;21!UBERON:0000020;6.75e-08;23!UBERON:0001032;1.31e-07;24!UBERON:0004456;1.31e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.05e-79,2;UBERON:0002757,1.05e-79,2;UBERON:0010134,1.05e-79,2;UBERON:0005408,1.05e-79,2;UBERON:0001899,1.05e-79,2;UBERON:0003296,1.48e-40,4;UBERON:0010133,1.48e-40,4;UBERON:0002784,1.48e-40,4;UBERON:0001894,1.02e-23,7;UBERON:0006222,1.02e-23,7;UBERON:0000970,1.48e-08,21;UBERON:0002104,1.48e-08,21;UBERON:0000966,6.78e-08,6;UBERON:0005388,6.78e-08,6;UBERON:0001802,6.78e-08,6;UBERON:0000020,1.31e-07,24;UBERON:0001032,1.31e-07,24;UBERON:0004456,1.31e-07,24 | |||
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|short_description=p2@FRMPD1 | |||
}} | }} |
Latest revision as of 11:15, 17 September 2015
Short description: | p2@FRMPD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FRMPD1_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 0bp_to_ENST00000539465, uc004aah.1_5end |
EntrezGene: | FRMPD1 |
HGNC: | 29159 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 1.05e-79 | 2 |
regional part of epithalamus | 1.05e-79 | 2 |
secretory circumventricular organ | 1.05e-79 | 2 |
circumventricular organ | 1.05e-79 | 2 |
epithalamus | 1.05e-79 | 2 |
gland of diencephalon | 1.48e-40 | 4 |
neuroendocrine gland | 1.48e-40 | 4 |
regional part of diencephalon | 1.48e-40 | 4 |
diencephalon | 1.02e-23 | 7 |
future diencephalon | 1.02e-23 | 7 |
eye | 1.48e-08 | 21 |
visual system | 1.48e-08 | 21 |
retina | 6.78e-08 | 6 |
photoreceptor array | 6.78e-08 | 6 |
posterior segment of eyeball | 6.78e-08 | 6 |
sense organ | 1.31e-07 | 24 |
sensory system | 1.31e-07 | 24 |
entire sense organ system | 1.31e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 3.79e-11 | 4 |
bronchus cancer | 6.39e-07 | 7 |
bronchogenic carcinoma | 6.39e-07 | 7 |