FFCP PHASE1:Hg19::chr3:128484059..128484060,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=3991 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-198bp_to_ENST00000480365_5end | |||
|cluster_id=chr3:128484059..128484060,- | |||
|coexpression_cluster_id=C804 | |||
|description=CAGE_peak_1_at_FTH1P4_5end | |||
|id=chr3:128484059..128484060,- | |||
|ontology_enrichment_celltype=CL:0000766!5.90e-21!76;CL:0002194!1.53e-19!63;CL:0000576!1.53e-19!63;CL:0000040!1.53e-19!63;CL:0000559!1.53e-19!63;CL:0002009!6.66e-18!65;CL:0000839!3.23e-17!70;CL:0000860!7.79e-17!45;CL:0000557!1.04e-15!71;CL:0002057!1.54e-15!42 | |||
|ontology_enrichment_celltype_v019=CL:0000473;2.37e-14;39!CL:0000234;2.37e-14;39!CL:0000860;3.52e-13;33!CL:0002057;3.52e-13;33!CL:0000576;1.26e-09;48!CL:0000766;3.46e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,6.10e-20,72;CL:0000473,1.77e-19,48;CL:0000234,1.77e-19,48;CL:0002194,1.55e-18,59;CL:0000576,1.55e-18,59;CL:0000040,1.55e-18,59;CL:0000559,1.55e-18,59;CL:0002009,1.07e-16,61;CL:0000839,3.33e-16,66;CL:0000860,1.16e-15,42;CL:0002057,1.16e-15,42;CL:0000557,1.22e-14,67 | |||
|ontology_enrichment_development_v019=CL:0002057;9.41e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!3.46e-15!167;UBERON:0000923!1.46e-14!604;UBERON:0005291!1.46e-14!604;UBERON:0006598!1.46e-14!604;UBERON:0002532!1.46e-14!604;UBERON:0002050!1.92e-14!605;UBERON:0005423!1.92e-14!605;UBERON:0000468!1.98e-14!659;UBERON:0000922!5.05e-14!612;UBERON:0002371!5.40e-14!80;UBERON:0000467!2.29e-13!625;UBERON:0000480!4.88e-13!626;UBERON:0002405!3.47e-12!115;UBERON:0004765!3.76e-12!101;UBERON:0001434!3.76e-12!101;UBERON:0001474!6.32e-12!86;UBERON:0002193!9.12e-11!112;UBERON:0002390!3.02e-10!102;UBERON:0003061!3.02e-10!102;UBERON:0000926!3.17e-09!448;UBERON:0004120!3.17e-09!448;UBERON:0006603!3.17e-09!448;UBERON:0003081!4.43e-08!216;UBERON:0000062!1.16e-07!511;UBERON:0000477!7.54e-07!286 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,8.64e-15,167;UBERON:0002050,9.39e-14,564;UBERON:0000923,1.26e-13,560;UBERON:0010316,1.26e-13,560;UBERON:0005291,1.26e-13,560;UBERON:0006598,1.26e-13,560;UBERON:0010317,1.26e-13,560;UBERON:0002532,1.26e-13,560;UBERON:0002371,6.00e-13,76;UBERON:0005423,9.78e-13,581;UBERON:0000922,1.09e-11,592;UBERON:0001434,3.59e-11,100;UBERON:0001474,4.87e-11,82;UBERON:0004765,5.90e-11,90;UBERON:0002405,8.46e-11,93;UBERON:0002193,9.99e-10,108;UBERON:0000926,2.04e-09,315;UBERON:0004120,2.04e-09,315;UBERON:0006603,2.04e-09,315;UBERON:0002390,3.36e-09,98;UBERON:0003061,3.36e-09,98;UBERON:0003081,3.92e-08,203 | |||
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| |||
|short_description=p1@FTH1P4 | |||
}} |
Latest revision as of 07:30, 20 September 2015
Short description: | p1@FTH1P4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FTH1P4_5end |
Coexpression cluster: | C804_Smooth_mesenchymal_CD14_Mesenchymal_Cardiac_Adipocyte_Fibroblast |
Association with transcript: | -198bp_to_ENST00000480365_5end |
EntrezGene: | NA |
HGNC: | 3991 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 6.10e-20 | 72 |
defensive cell | 1.77e-19 | 48 |
phagocyte | 1.77e-19 | 48 |
monopoietic cell | 1.55e-18 | 59 |
monocyte | 1.55e-18 | 59 |
monoblast | 1.55e-18 | 59 |
promonocyte | 1.55e-18 | 59 |
macrophage dendritic cell progenitor | 1.07e-16 | 61 |
myeloid lineage restricted progenitor cell | 3.33e-16 | 66 |
classical monocyte | 1.16e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.16e-15 | 42 |
granulocyte monocyte progenitor cell | 1.22e-14 | 67 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 8.64e-15 | 167 |
embryonic structure | 9.39e-14 | 564 |
germ layer | 1.26e-13 | 560 |
germ layer / neural crest | 1.26e-13 | 560 |
embryonic tissue | 1.26e-13 | 560 |
presumptive structure | 1.26e-13 | 560 |
germ layer / neural crest derived structure | 1.26e-13 | 560 |
epiblast (generic) | 1.26e-13 | 560 |
bone marrow | 6.00e-13 | 76 |
developing anatomical structure | 9.78e-13 | 581 |
embryo | 1.09e-11 | 592 |
skeletal system | 3.59e-11 | 100 |
bone element | 4.87e-11 | 82 |
skeletal element | 5.90e-11 | 90 |
immune system | 8.46e-11 | 93 |
hemolymphoid system | 9.99e-10 | 108 |
mesoderm | 2.04e-09 | 315 |
mesoderm-derived structure | 2.04e-09 | 315 |
presumptive mesoderm | 2.04e-09 | 315 |
hematopoietic system | 3.36e-09 | 98 |
blood island | 3.36e-09 | 98 |
lateral plate mesoderm | 3.92e-08 | 203 |