FFCP PHASE1:Hg19::chr3:156877038..156877058,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57018 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20569 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000464575_5end | |||
|cluster_id=chr3:156877038..156877058,- | |||
|coexpression_cluster_id=C91 | |||
|description=CAGE_peak_35_at_CCNL1_5end | |||
|id=chr3:156877038..156877058,- | |||
|ontology_enrichment_celltype=CL:0002031!7.29e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000214;3.11e-27;3!CL:0000511;1.87e-21;1!CL:0002625;1.87e-21;1!CL:0000216;1.87e-21;1!CL:0000153;9.23e-10;9!CL:0000447;9.23e-10;9!CL:0002579;6.56e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000214,1.82e-27,3;CL:0000511,1.88e-21,1;CL:0002625,1.88e-21,1;CL:0000216,1.88e-21,1;CL:0000153,7.74e-10,9;CL:0000447,7.74e-10,9;CL:0002579,6.34e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4929;3.18e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,4.09e-11,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0006915;3.11e-27;3!UBERON:0007616;3.11e-27;3!UBERON:0002217;3.11e-27;3!UBERON:0002018;3.11e-27;3!UBERON:0001136;1.87e-21;1!UBERON:0001343;1.87e-21;1!UBERON:0004910;1.87e-21;1!UBERON:0004813;1.87e-21;1!UBERON:0007195;4.66e-21;1!UBERON:0004913;4.66e-21;1!UBERON:0003703;4.66e-21;1!UBERON:0001174;4.66e-21;1!UBERON:0004914;4.66e-21;1!UBERON:0004457;2.18e-20;9!UBERON:0000042;2.18e-20;9!UBERON:0002108;8.81e-17;4!UBERON:0004909;2.02e-11;2!UBERON:0004905;7.29e-11;8!UBERON:0000982;7.29e-11;8!UBERON:0004770;7.29e-11;8!UBERON:0000058;5.92e-09;10!UBERON:0002114;6.56e-08;2!UBERON:0006914;8.41e-08;25!UBERON:0000486;1.52e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,1.82e-27,3;UBERON:0007616,1.82e-27,3;UBERON:0002217,1.82e-27,3;UBERON:0002018,1.82e-27,3;UBERON:0001136,1.88e-21,1;UBERON:0001343,1.88e-21,1;UBERON:0004910,1.88e-21,1;UBERON:0005154,1.88e-21,1;UBERON:0005295,1.88e-21,1;UBERON:0004813,1.88e-21,1;UBERON:0005297,1.88e-21,1;UBERON:0005294,1.88e-21,1;UBERON:0010141,1.88e-21,1;UBERON:0005891,1.88e-21,1;UBERON:0007195,6.31e-21,1;UBERON:0004913,7.72e-21,1;UBERON:0003703,7.72e-21,1;UBERON:0001174,7.72e-21,1;UBERON:0004914,7.72e-21,1;UBERON:0002108,1.42e-16,4;UBERON:0004457,1.42e-15,12;UBERON:0000042,1.42e-15,12;UBERON:0004909,2.02e-11,2;UBERON:0004905,5.98e-11,8;UBERON:0000982,5.98e-11,8;UBERON:0004770,5.98e-11,8;UBERON:0006914,7.66e-08,25;UBERON:0002114,7.76e-08,2;UBERON:0004458,7.27e-07,49 | |||
|phase1_expression=0.363356758541113,0,0.563817616383885,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0.0774672005803016,0,0,0.553995408531877,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0.236482229888585,0,0,0,0,0,0,0,0.962787081228281,0,0,0,0.426224750532694,0,0,0,0.251248665256743,0.521482918420201,1.52032191293582,0.605399502633369,0,0.632924774881769,0,0,0,0.112328631146495,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0.263384084775077,0.196709770113833,0.786021525498329,0.411202997999018,0,0.651844533267181,0.946895611469467,0,0,0,0,0,0,0.260118695119756,0.164437904603676,0,0,0.14828656316206,0,0,0.113309342697566,0,0.34362744548263,0.253019692019503,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0.604820229674197,0.267440195783507,0.579297615531196,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0.324547393654683,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0.516833518338658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,7.81214166797991,0,0.709336764396714,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0.441463099414651,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0.492663237895943,0,0,0,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579125226670317,0,0,0,0.197030760201927,0.646882724578552,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0.280660094433074,1.15325234330131,0.511707249066704,0.482561763430822,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21367859688319,0,0,0,0,0,0,0,0,0,0.192190067365106,0.510450849978337,0.10115778085555,0,0.31481234683064,0,0.308033580176089,0,0.869932992075073,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0.731140468893853,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,1.47775344708365,1.31717957183961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0.123084805461069,0,0.0898683511473268,0,0,0,0,1.11136990144637,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0.10893846351899,0.139423744278603,0.0769502585037971,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0,0,0.265372693510018,0,0.296521128680622,0.123563938946503,0.208843899010911,0,0,0,0,0,0.242780379534093,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0.173559738335131,0.783939179315021,0,0,0,0,0,0,0,0.0882561266915003,0,0,0,0,0,0.160317640503067,0.213452994739353,0,0,0,0,0.14405479798815,0.124252535565433,0,0,0.104602846312333,0.203996435272644,0,0,0,0,0,0,0.279282401272254,0,0.717873024576814,0,0,0,0,0,0,0,0.0824158583811665,0,0,0.0846733320657845,0,0,0,0,0,0.2249738915515,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0.919036730290385,0.327872630709804,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0.233713309847224,0,0.378806010550178,0,0,1.14420034198462,0.453692771289717,0,0,0,0,0,0,0,0,0,0.380805212168795,0.406870733204662,0,0,0,0,0,0,0,0,0,0.428883182749851,0.260994291965212,0,0,0,0,0,0.219284049578707,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0.39997479170986,0,0.172214979660816,0,0.184105950251841,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0.183428598521679,0.462102664601353,0,0,0,0,0,0,0,0,1.03499260351932,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0.335566295393377,0,0.243835849964539,0,0,0,0,0,0,0.118920090777569,0,0,0,1.00326405540328,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.435433495793923,0,0.0673520530145875,0.0717222053926763,0,0.0814032686109745,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0.320568492303233 | |||
|short_description=p35@CCNL1 | |||
}} |
Latest revision as of 07:08, 16 September 2015
Short description: | p35@CCNL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_35_at_CCNL1_5end |
Coexpression cluster: | C91_Fibroblast_Smooth_mesenchymal_Mesothelial_Small_Preadipocyte_Hair |
Association with transcript: | 0bp_to_ENST00000464575_5end |
EntrezGene: | CCNL1 |
HGNC: | 20569 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
synovial cell | 1.82e-27 | 3 |
androgen binding protein secreting cell | 1.88e-21 | 1 |
seminiferous tubule epithelial cell | 1.88e-21 | 1 |
Sertoli cell | 1.88e-21 | 1 |
GAG secreting cell | 7.74e-10 | 9 |
carbohydrate secreting cell | 7.74e-10 | 9 |
omentum preadipocyte | 6.34e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 1.82e-27 | 3 |
layer of synovial tissue | 1.82e-27 | 3 |
synovial joint | 1.82e-27 | 3 |
synovial membrane of synovial joint | 1.82e-27 | 3 |
mesothelium | 1.88e-21 | 1 |
seminiferous tubule of testis | 1.88e-21 | 1 |
epithelium of male gonad | 1.88e-21 | 1 |
epithelial cord | 1.88e-21 | 1 |
sex cord | 1.88e-21 | 1 |
seminiferous tubule epithelium | 1.88e-21 | 1 |
testis sex cord | 1.88e-21 | 1 |
genital ridge | 1.88e-21 | 1 |
primitive sex cord of indifferent gonad | 1.88e-21 | 1 |
coelomic epithelium | 1.88e-21 | 1 |
stroma of bone marrow | 6.31e-21 | 1 |
hepatopancreatic ampulla | 7.72e-21 | 1 |
extrahepatic bile duct | 7.72e-21 | 1 |
common bile duct | 7.72e-21 | 1 |
duodenal papilla | 7.72e-21 | 1 |
small intestine | 1.42e-16 | 4 |
cavity lining | 1.42e-15 | 12 |
serous membrane | 1.42e-15 | 12 |
epithelium of gonad | 2.02e-11 | 2 |
articulation | 5.98e-11 | 8 |
skeletal joint | 5.98e-11 | 8 |
articular system | 5.98e-11 | 8 |
squamous epithelium | 7.66e-08 | 25 |
duodenum | 7.76e-08 | 2 |
body cavity or lining | 7.27e-07 | 49 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 4.09e-11 | 2 |