FFCP PHASE1:Hg19::chr3:52227542..52227550,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=415 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=356bp_to_ENST00000491506_5end | |||
|cluster_id=chr3:52227542..52227550,+ | |||
|description=CAGE_peak_1_at_ALDOAP1_5end | |||
|id=chr3:52227542..52227550,+ | |||
|ontology_enrichment_celltype=CL:0000680!5.06e-07!57;CL:0000056!5.06e-07!57;CL:0000355!5.06e-07!57;CL:0000393!6.04e-07!60;CL:0000211!6.04e-07!60;CL:0000187!6.25e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0000346;1.21e-20;3!CL:1000428;1.21e-20;3!CL:0002559;1.28e-12;5!CL:0002595;1.28e-12;5!CL:0002599;5.03e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,1.60e-20,3;CL:1000428,1.60e-20,3;CL:0002595,6.54e-13,5;CL:0002559,1.52e-12,5;CL:0002599,4.71e-08,1;CL:0000359,4.35e-07,32;CL:0000192,7.40e-07,43;CL:0000514,7.40e-07,43 | |||
|ontology_enrichment_development_v019=UBERON:0004874;5.03e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;7.84e-08;4!DOID:1612;7.84e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,5.60e-08,4;DOID:1612,5.60e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0004290!3.10e-09!70;UBERON:0000914!2.25e-08!83;UBERON:0002329!2.25e-08!83;UBERON:0003077!2.25e-08!83;UBERON:0003059!2.25e-08!83;UBERON:0007282!2.25e-08!83;UBERON:0009618!2.25e-08!83;UBERON:0007285!2.25e-08!83;UBERON:0000486!2.80e-08!82;UBERON:0001134!2.96e-07!61;UBERON:0002036!2.96e-07!61;UBERON:0003082!2.96e-07!61;UBERON:0002385!4.63e-07!63;UBERON:0001015!4.63e-07!63;UBERON:0000383!4.63e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;1.21e-20;3!UBERON:0001992;1.21e-20;3!UBERON:0002073;1.28e-12;5!UBERON:0003834;1.28e-12;5!UBERON:0001533;1.28e-12;5!UBERON:0000310;3.09e-11;10!UBERON:0001443;3.16e-10;11!UBERON:0001723;7.14e-10;3!UBERON:0001033;7.14e-10;3!UBERON:0003513;3.72e-09;7!UBERON:0000989;5.03e-08;1!UBERON:0008811;5.03e-08;1!UBERON:0002067;3.20e-07;9!UBERON:0000915;5.20e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,1.60e-20,3;UBERON:0001992,1.60e-20,3;UBERON:0003834,6.54e-13,5;UBERON:0001533,6.54e-13,5;UBERON:0002073,1.52e-12,5;UBERON:0005086,1.52e-12,5;UBERON:0000310,3.03e-11,10;UBERON:0001443,3.11e-10,11;UBERON:0001723,4.79e-10,3;UBERON:0001033,4.79e-10,3;UBERON:0010056,4.79e-10,3;UBERON:0002329,1.98e-09,71;UBERON:0003059,1.98e-09,71;UBERON:0007282,1.98e-09,71;UBERON:0004290,1.98e-09,71;UBERON:0009618,1.98e-09,71;UBERON:0003513,2.31e-09,7;UBERON:0003077,2.84e-09,72;UBERON:0007285,2.84e-09,72;UBERON:0000915,3.22e-09,52;UBERON:0007524,4.05e-09,73;UBERON:0002100,2.00e-08,199;UBERON:0007503,2.07e-08,78;UBERON:0000989,4.40e-08,1;UBERON:0008811,4.40e-08,1;UBERON:0006258,4.40e-08,1;UBERON:0005876,4.40e-08,1;UBERON:0004874,4.40e-08,1;UBERON:0000486,8.66e-08,83;UBERON:0002067,3.50e-07,9;UBERON:0004016,3.50e-07,9;UBERON:0010083,3.50e-07,9;UBERON:0001637,4.57e-07,42;UBERON:0003509,4.57e-07,42;UBERON:0004572,4.57e-07,42;UBERON:0004573,6.21e-07,33;UBERON:0004571,6.21e-07,33 | |||
|phase1_expression=0.181678379270557,2.14100523890983,0.422863212287913,1.0007329835313,0.893922188854576,0,0,0,0.522371256399677,0,0.697801167972428,0.218441372130172,0,0,0.331397375727916,0,0,0,0.975865597581014,0,0.204000691244253,0,0,0.273748850145768,0.251085279189606,0.229240217243854,0.0821005894499457,0.157421562627358,0,0,0,0,0.90361775633475,0.369754010166788,0,0.142169232487422,0,0,0,0,0.223915474239924,0,0.515151135268373,0,0,0,0.232429036905685,0.411167888021826,0,0,0.512321413058201,0,0.344745680736619,0,0,0.752969358170419,0.272906150057846,0,0.306083892370903,0,0,0,0.199463657621632,0,0,0.56738522469114,0,0.251248665256743,0,0,0,0,0.316462387440884,0.422510572623884,0.850417199860174,0,0.22465726229299,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0.25618263945135,0.260118695119756,0,0.276350017785848,0,0.14828656316206,0,1.04535523804977,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0.144824403882799,0,0,0.383587685530591,0,1.00267582127178,0.434539556882471,0,0.486634870302636,0.0945348171640679,0.443458794925128,0.087834785693126,0.130979075497713,0.364295288292542,0.370784442784429,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0.550236083880135,0.208994966536811,0.516833518338658,0,0,0,0,0.976248230192678,0,1.62028389576352,0,0,0,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0.560677600142307,0,0.98667019366864,0,0,0.163461903113459,0.151357427644931,0,0.234321431833797,0,0,0.597794722207204,0.352303495931295,0.161872944368132,0.561803226808994,0.204154171254893,0.245668634623536,0.206651562351531,0,0.989067717114227,0,0,0,0.125118519871964,0,0,0.30648779579902,0,0.226864366320042,0,0,0,0,0.103052529238439,0,0,0,0.194874010322397,0,0,0,0,0,0.169560592310488,0.386521706326594,0.272746120590835,0,0.609868530647977,0.132529768321485,0.232387885739037,0.10366105501537,0.252320850875628,0,1.56449532329816,1.28648187638577,1.38134921352481,0.464367928031979,0,0.236613600079688,0.505754070234305,0,0.441175890929576,0.435758888184812,0,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0.171567810298526,0.329250856225877,0,0,0.0925884451585296,0,0,0,0,0,0.144366447761074,0,0.380508304469197,2.37061319387782,1.71697232418975,0,0.234004265139238,0.148631162288728,0.93733833986777,0,0.141775097242386,0,0,0.383382679165211,0,0.088048434013226,0,0,0,0.126995788584338,0.381988425558278,1.17217447210047,0,0.102827492703324,0,0,0,0,0.07333828582095,0.129271715757778,0,0.845302752556,0.26593811658487,0,0,0,0.266422179016099,0.142977993658148,0.542621605391443,0.823240336780769,0,0.355391948742546,0,0.602878754119172,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0,0,0,0.215627574859517,0.128343036279748,0,0,0,0,0,0.749007023947182,2.99161459204025,0,0,0,0.271265023699736,0.207970861530807,0.535286966391485,0,0.35142424497814,0.601892199455438,0,1.03473071292505,0,0.553107505625109,0.173767228936166,0,0,0,0.215714200818617,0.106727557803444,0,0,0.604780586659361,0,0,1.12264037773229,0.384417447767103,0,0,0,0,0.710246901252508,0.164254312027618,0,0.348631135379878,0,0.802025881213139,0.184161977871793,0.229628896329213,0.182091168006717,0.131124414959424,0,0.231046011313244,0,0,0,0,0.170093705276516,0,0,0,0,0,1.66215201785745,0.223874754722178,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0.096670718292122,0.462145851343933,0.460511024178389,0,0.214840489736547,0.435050081742686,0.255679882248303,0.178064071293475,0.330569830721956,0,0.127612712494584,0.10115778085555,0.929691098594572,0,0,0.924100740528266,0,0,0.37064843820784,0.429374660225974,0,0.632758849437452,0.571890581771475,0.255897791311334,0,0.95460974377781,1.56989728039846,0.359744915166629,0,0.235624804691373,0.202182481573316,1.58510321173008,0,1.46290121726877,0.731140468893853,0,0,0.707027159768564,0,1.65409603063837,1.99031692572366,1.31535265576129,0.578775534266688,0,0.405820753925408,0.30982349809975,0.845086807596724,0,0.196498082026242,1.07001315444375,0.354761064070598,0.211107635297664,0.329294892959902,0,0,0.192444225451024,0,0,0.0941438007767792,0,0,0.443430153536676,0,0,0,0.569647187174163,0,0,0,0,1.58625035258854,0.213648142254946,0,0,0,0,0,0.159426272728822,0.199579371432817,0,0,0,0.842391534340376,0,0.156679895773023,0,0,0.1605880751037,0.403599414382095,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0.37428108081644,0.146508179271894,0.121360521749513,0.111443384277478,0,0.47748896947538,0.296964680832639,0,0,0,0,0.329607748453519,0,0,0,0,0,0,0.622079175323615,0,0,0.511572370226872,0.690503839458535,0,0,0,0.185536196323703,0,0,0.0874599999961957,0,0.227586896570999,0,0,0,0,0,0,0.361789315876224,0,0,0.591095237907095,0.658156191461918,0,0.139423744278603,0,0,0,0.269272933229316,0,0.638002319463839,0.549585560411174,0,0,0,0,0.451191321234361,0.392125068635479,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0.067401132980677,0.802577647298789,0.234264445725339,0.182454789215666,0,0,0,0,0,0.063186579628488,0,0,0,0.330991955875499,0,0,0,0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| |||
|short_description=p1@ALDOAP1 | |||
}} |
Latest revision as of 22:42, 18 September 2015
Short description: | p1@ALDOAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ALDOAP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 356bp_to_ENST00000491506_5end |
EntrezGene: | NA |
HGNC: | 415 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 1.60e-20 | 3 |
stem cell of epidermis | 1.60e-20 | 3 |
smooth muscle cell of the subclavian artery | 6.54e-13 | 5 |
hair follicle cell | 1.52e-12 | 5 |
smooth muscle cell of the esophagus | 4.71e-08 | 1 |
vascular associated smooth muscle cell | 4.35e-07 | 32 |
smooth muscle cell | 7.40e-07 | 43 |
smooth muscle myoblast | 7.40e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 1.60e-20 | 3 |
papillary layer of dermis | 1.60e-20 | 3 |
thoracic segment blood vessel | 6.54e-13 | 5 |
subclavian artery | 6.54e-13 | 5 |
hair follicle | 1.52e-12 | 5 |
hair follicle placode | 1.52e-12 | 5 |
breast | 3.03e-11 | 10 |
chest | 3.11e-10 | 11 |
tongue | 4.79e-10 | 3 |
gustatory system | 4.79e-10 | 3 |
future tongue | 4.79e-10 | 3 |
somite | 1.98e-09 | 71 |
presomitic mesoderm | 1.98e-09 | 71 |
presumptive segmental plate | 1.98e-09 | 71 |
dermomyotome | 1.98e-09 | 71 |
trunk paraxial mesoderm | 1.98e-09 | 71 |
trunk blood vessel | 2.31e-09 | 7 |
paraxial mesoderm | 2.84e-09 | 72 |
presumptive paraxial mesoderm | 2.84e-09 | 72 |
thoracic segment of trunk | 3.22e-09 | 52 |
dense mesenchyme tissue | 4.05e-09 | 73 |
trunk | 2.00e-08 | 199 |
epithelial vesicle | 2.07e-08 | 78 |
penis | 4.40e-08 | 1 |
intromittent organ | 4.40e-08 | 1 |
lateral plate mesenchyme | 4.40e-08 | 1 |
undifferentiated genital tubercle | 4.40e-08 | 1 |
somatopleure | 4.40e-08 | 1 |
multilaminar epithelium | 8.66e-08 | 83 |
dermis | 3.50e-07 | 9 |
dermatome | 3.50e-07 | 9 |
future dermis | 3.50e-07 | 9 |
artery | 4.57e-07 | 42 |
arterial blood vessel | 4.57e-07 | 42 |
arterial system | 4.57e-07 | 42 |
systemic artery | 6.21e-07 | 33 |
systemic arterial system | 6.21e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 5.60e-08 | 4 |
breast cancer | 5.60e-08 | 4 |