FFCP PHASE1:Hg19::chr3:55515400..55515437,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7474 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12784 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000497027,uc010hmw.2_5end | |||
|cluster_id=chr3:55515400..55515437,- | |||
|coexpression_cluster_id=C1516 | |||
|description=CAGE_peak_3_at_WNT5A_5end | |||
|id=chr3:55515400..55515437,- | |||
|ontology_enrichment_celltype=CL:0000055!6.81e-26!180;CL:0000057!3.53e-19!75;CL:0002620!3.68e-11!23;CL:0000680!1.88e-08!57;CL:0000056!1.88e-08!57;CL:0000355!1.88e-08!57;CL:0000187!1.84e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0002620;9.51e-14;23!CL:0000134;1.28e-13;55!CL:0000349;3.40e-13;19!CL:0000723;1.17e-12;61!CL:0000048;3.19e-12;58!CL:0000057;4.30e-10;73!CL:0000034;4.22e-09;69!CL:0002320;1.16e-08;188!CL:0000499;2.12e-07;28!CL:0000327;8.67e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.38e-22,76;CL:0002620,9.43e-14,23;CL:0000349,3.58e-13,19;CL:0000048,7.02e-11,427;CL:0000723,4.21e-10,433;CL:0000034,4.03e-09,441;CL:0000499,1.63e-07,28;CL:0002320,5.48e-07,361;CL:0000327,6.29e-07,15;CL:0000680,6.62e-07,58;CL:0000056,6.62e-07,58;CL:0000355,6.62e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;4.02e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.66e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000475!5.70e-14!365;UBERON:0000914!1.57e-13!83;UBERON:0002329!1.57e-13!83;UBERON:0003077!1.57e-13!83;UBERON:0003059!1.57e-13!83;UBERON:0007282!1.57e-13!83;UBERON:0009618!1.57e-13!83;UBERON:0007285!1.57e-13!83;UBERON:0003102!6.90e-12!95;UBERON:0000481!6.17e-11!347;UBERON:0005631!8.84e-11!14;UBERON:0000158!8.84e-11!14;UBERON:0004290!2.95e-10!70;UBERON:0005256!5.15e-09!143;UBERON:0002199!6.40e-09!45;UBERON:0002416!6.40e-09!45;UBERON:0000478!1.55e-08!24;UBERON:0000486!2.72e-08!82;UBERON:0002097!9.35e-08!40;UBERON:0000064!1.13e-07!219;UBERON:0001134!2.16e-07!61;UBERON:0002036!2.16e-07!61;UBERON:0003082!2.16e-07!61;UBERON:0002385!2.23e-07!63;UBERON:0001015!2.23e-07!63;UBERON:0000383!2.23e-07!63;UBERON:0004871!2.56e-07!8;UBERON:0004923!3.44e-07!57;UBERON:0001444!5.30e-07!48;UBERON:0000305!7.65e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;4.49e-11;24!UBERON:0005631;7.75e-10;10!UBERON:0000158;7.75e-10;10!UBERON:0002097;3.71e-08;41!UBERON:0000305;3.81e-08;7!UBERON:0002384;5.03e-08;198!UBERON:0001737;3.01e-07;9!UBERON:0001557;3.01e-07;9!UBERON:0003102;3.50e-07;50!UBERON:0002199;4.96e-07;46!UBERON:0002416;4.96e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.90e-13,14;UBERON:0000158,4.90e-13,14;UBERON:0003102,1.41e-12,99;UBERON:0002199,1.09e-11,46;UBERON:0002416,1.09e-11,46;UBERON:0000478,4.56e-11,24;UBERON:0002097,1.28e-10,41;UBERON:0007524,1.59e-09,73;UBERON:0002329,2.35e-09,71;UBERON:0003059,2.35e-09,71;UBERON:0007282,2.35e-09,71;UBERON:0004290,2.35e-09,71;UBERON:0009618,2.35e-09,71;UBERON:0003077,4.86e-09,72;UBERON:0007285,4.86e-09,72;UBERON:0004871,9.84e-09,8;UBERON:0004923,1.38e-08,66;UBERON:0007503,2.12e-08,78;UBERON:0000305,3.84e-08,7;UBERON:0000486,6.69e-08,83;UBERON:0001444,2.19e-07,49;UBERON:0001737,2.90e-07,9 | |||
|phase1_expression=2.54349730978779,2.35510576280081,0.422863212287913,2.00146596706261,2.23480547213644,4.36169262050184,5.06599756336621,1.89515962028049,0.261185628199839,0.737201809504527,0,109.220686065086,93.3735102928726,3.46545788288131,5.30235801164665,0.672325146451775,0.602694528023977,0.730310090387373,0.975865597581014,17.1138270726735,21.8280739631351,8.14982275843028,2.0036519099174,2.87436292653057,1.12988375635323,0,0,0,0,0,3.2511385896376,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,40.842624219456,55.1471701699478,30.9971550576163,31.811437882044,16.058950719987,4.25406677238305,13.3037638477538,11.9455308542651,0.196468613246569,0,0,0.97364218096405,2.08955684759121,1.06366368415092,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,3.47880366186723,0,0.529636723252875,0.286836620748814,2.83734705758686,2.80338800071154,1.06748995729705,1.2333377420858,0,1.34710672069688,0.653847612453835,2.11900398702904,1.72852777344,6.32667865951251,3.1216007683032,1.1409436430889,1.49448680551801,4.46251094846307,8.57926605151097,6.60118791500568,18.1697212416855,8.59840221182376,17.7720343622317,95.0402285825643,74.6746126421242,4.55080680969013,2.15585442544872,7.91179735584111,7.38199267244589,23.2733857006714,14.9252391099485,30.955267375701,43.1183229061933,0.680593098960126,31.7519655169286,69.619708754853,32.2136489762534,29.7090185123558,34.8317548825923,28.3404594050192,29.034229587728,6.07594796068558,2.82567314967476,21.7093045849938,53.2968913138913,6.62748832957129,50.0563525448426,16.3218399128777,13.564847384839,0,0.272746120590835,0,0.121973706129595,0,0,0,0,0,81.3537568115043,55.3187206845881,38.6777779786946,25.0758681137269,10.8281922250438,10.4109984035063,11.632343615389,11.3275184045237,12.7941008369577,13.5085255337292,10.9144484791104,9.842685495692,14.1279454890249,11.5424147083917,0,14.0241773803446,3.2925920906512,1.47008711385542,0,0,0,0,0.122988438543114,16.8136454092555,0,0,0.100528972411631,0.370353780634118,6.84197441151682,10.3993478527958,7.21656710126366,4.86907700895323,19.4898432431464,0.288732895522148,0,0,0,0,0,0,0,0,1.34385702559088,0.283550194484773,0,0,0,0,0,0.207328115540772,0.144119953416961,0,0.952468414382536,0,0,0,4.52440967894623,0,0,1.12131084345361,2.61576041299968,3.59357600522655,1.16344544182,0,27.894990834348,59.570138115011,33.2823798116371,4.62973273671856,4.25547396069835,4.52917704327369,11.7241954799681,11.3950537132203,7.40916303102692,27.6875756649675,11.0171504110189,21.3827005692026,7.53598442648965,2.61460037580088,6.09835246210548,0,0,0,1.19812427745791,0,14.2636905040718,9.12122232005749,5.13690806375959,7.87868238255541,0,0,0,0,2.03275699377971,0,0,0.335032530668698,0.637938751653163,0,0,0,2.4538298343828,1.00034104211935,6.51036056879365,31.4036000911519,48.7111139416252,73.0162181607118,57.165010516444,7.52365249319297,4.5481500811197,4.1389228517002,10.627609576567,10.1403042697937,31.451868437446,0.391602314925481,0,0,0,0,47.5910287170627,104.854326891613,89.8099171189151,2.23297027036899,1.53461973288062,1.40330047216537,0.384417447767103,3.07024349440022,2.2519548960105,2.96836132889982,14.9583402988576,4.6166048581413,9.69100440962948,14.0198695879578,8.59956800603698,0,0.200506470303285,0.184161977871793,9.64441364582697,11.1075612484097,5.37610101333639,0,0.231046011313244,0,0,0.422206515571503,0,0,5.82972973475776,0,1.89662506280697,0,0,0,2.23874754722178,0,0,1.02580050046556,0.328014645699706,1.30151357865721,0.824328093181778,0,0,10.9110452219273,0,11.2478750890912,12.3738519413916,3.38906957652218,1.07452572308291,7.58101148664918,6.23037420235987,5.36561767482646,4.68746450788555,2.31483292681517,0,0,0,0,0.464845549297286,18.5739284630078,0.6970372701606,0,0,0.869932992075073,3.7064843820784,1.14499909393593,2.60510858551767,4.11293252134344,15.6316759017536,3.83846686967001,2.99557291623744,0.95460974377781,0,7.91438813366585,6.86342574340137,10.0140541993833,1.2130948894399,0,0.842516912477962,4.38870365180631,2.92456187557541,2.11300293513511,13.6499911407986,13.8577323314639,0,0.551365343546124,0,2.19225442626881,1.15755106853338,4.59126326432643,9.13096696332168,2.78841148289775,1.12678241012897,4.58916327052965,4.81420300964294,7.133421029625,0,2.53329162357197,2.96365403663912,4.9331512589543,6.29882496440969,0.0962221127255121,0.670302275535787,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,1.38871292465715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70481688083848,76.6369796007985,131.555353608859,92.1482106297696,0.994147647766298,0.703347082052564,0.333926115068718,0,0,0.398495976502139,0,0,0,0,3.73247505194169,0,0,0,0,0,0,0,0.463840490809256,0,0,0,0,0.1137934482855,0,0,0,2.04123229368278,0.520874984799877,0,0.361789315876224,0,0.995213339381022,0.591095237907095,0.438770794307945,0.21787692703798,0,0.692552326534174,21.7629326667772,0,0,0,18.8210684241832,54.7753608543137,2.66517388009317,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0.995261931078505,0.176915129006678,0.611030144933625,0,0,0,0.539209063845416,0,0.234264445725339,0,0,0,1.57833761139756,1.20990716048664,0.61214552326098,0,0,0,0.664653872707185,0,0,0,0,0.138674673013139,0,0,0,0.52418000472609,0,3.09620260125072,2.33885814675794,2.6276946257027,0.193978032976839,0,0.90392296312213,0,0,0.253243183823515,0,2.88571752905521,1.06726497369676,4.59562102038899,0,0,15.4435498075768,0,0,0,1.9026588850306,1.77824838730966,17.0337023452657,0.866851769704557,0,0,0,0.859530882839914,0,0,0,0,0,0,0,0.0671834724867263,11.8898961568993,0,0,0,0,0,0,0.795229689809303,0.408610218334727,0,0,0,0,0,0.485996453264197,0,0.0788057072991982,0.472091293214983,0,0,0,0,0,0,0,0,0.653174720218818,3.59190574687462,0,74.2891774984439,0.79318464064088,0,0,0.646414781807753,0.26446520348538,0,0,0.747511887973863,1.41483874589699,0.414239055347196,0,0,0,0.638341257770182,0,0,0,0,0.157054096250234,0,0.610131324509816,0.500763722825999,0,0.110929051536852,0.620964029413834,0.138348634936231,0,0,0,0,0,0.28984205722165,7.61199494723058,3.97312626740282,1.10961172300523,14.3946284009068,6.0376296420618,17.7962244319307,1.37304041038154,1.05861646634267,0.15543720058278,4.28779934969938,7.96483835818512,32.3858240757795,8.07367375756549,5.39118070193112,5.84851772027589,67.3051129737137,6.61133479587761,7.23529903120711,6.91680246447925,31.6416667012453,13.641140744396,0.928067519756987,51.7524655308201,14.0009717632104,2.40376993627955,3.36749488765919,0,0.192619830407303,3.00218227924896,1.04397716786085,15.6427088603468,1.389134845943,4.16052397660995,4.47722102703719,4.01441881309264,10.3063503301992,0.176689145945881,0.964570191354574,0,0,0.690860683462397,0.303859956177382,0.276516872303462,0,0,0,3.27609848846413,0,0,0,0,0,0,30.7456936920574,0.139879507719444,5.59869534029676,0,0,0.786329709279482,0,1.01839517972415,0.212574920101683,1.73510069962603,0.558644917973244,4.45206090914786,0,0,20.102528790369,51.4492401953376,0.449604575675217,0,0.319267718114302,0.205116364240755,0,0.345786262321089,0.322951291263702,0,0,0,0,0,0,1.3807198521202,0,0.451261970095544,0,0,0,0,0,0.202612753855184,0.781078098613847,0.413373593002368,0.317079050969534,0.546974809018219,7.12735096914337,1.98484471355718,4.39678110899052,0,0,0,0,0,5.85435643073416,0,0,0.203909198930495,0.197318320688547,0.118193840883968,0.667388411352415,0.78493092850514,0.157115589916002,0,0,5.39818978046554,0,0.142953088353313,0,0,0,3.20684545892101,0,0,0.691259661814092,3.8720462293825,1.06498800657509,1.02256085710989,0.846774100381858,1.3746412112643,0,0.955538938977433,0,0,0,0,0,1.1598144313382,0,0,0.397901550322736,0.118920090777569,7.22854925049344,0,1.35866559210006,0.463044948647668,0.437119121007915,9.87666322359198,0.245148321753905,1.64973582971138,0.196308467114945,0.891139200981258,0.8453114551668,5.60759478469796,0.0939839179798536,0,0,0,0,0,0,2.75237570042724,0.430018749454354,1.89325874631822,0.339957450954573,0.436350690340377,0,10.0438654905023,4.62175628631418,3.46101249699031,0,0,0,0,0,0,0,0.303114792872958,0.535928260312357,0.829169439458779,0.20686599172379,1.70587185520785,0.476128862927481,0.129177819672012,0.186224142887574,2.13050538903166,0,0.202117188958219,2.17716747896961,1.71116650542641,0.134704106029175,0.645499848534087,2.32862249582209,1.30245229777559,0,30.8915651659104,0,2.34640942403454,2.32258743947446,4.06896178315738,0.665756774185513,0,0 | |||
|short_description=p3@WNT5A | |||
}} |
Latest revision as of 02:59, 19 September 2015
Short description: | p3@WNT5A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_WNT5A_5end |
Coexpression cluster: | C1516_amniotic_Fibroblast_Hair_Amniotic_Placental_Chondrocyte_liposarcoma |
Association with transcript: | 0bp_to_ENST00000497027, uc010hmw.2_5end |
EntrezGene: | WNT5A |
HGNC: | 12784 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.38e-22 | 76 |
skin fibroblast | 9.43e-14 | 23 |
extraembryonic cell | 3.58e-13 | 19 |
multi fate stem cell | 7.02e-11 | 427 |
somatic stem cell | 4.21e-10 | 433 |
stem cell | 4.03e-09 | 441 |
stromal cell | 1.63e-07 | 28 |
connective tissue cell | 5.48e-07 | 361 |
extracellular matrix secreting cell | 6.29e-07 | 15 |
muscle precursor cell | 6.62e-07 | 58 |
myoblast | 6.62e-07 | 58 |
multi-potent skeletal muscle stem cell | 6.62e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 4.90e-13 | 14 |
membranous layer | 4.90e-13 | 14 |
surface structure | 1.41e-12 | 99 |
integument | 1.09e-11 | 46 |
integumental system | 1.09e-11 | 46 |
extraembryonic structure | 4.56e-11 | 24 |
skin of body | 1.28e-10 | 41 |
dense mesenchyme tissue | 1.59e-09 | 73 |
somite | 2.35e-09 | 71 |
presomitic mesoderm | 2.35e-09 | 71 |
presumptive segmental plate | 2.35e-09 | 71 |
dermomyotome | 2.35e-09 | 71 |
trunk paraxial mesoderm | 2.35e-09 | 71 |
paraxial mesoderm | 4.86e-09 | 72 |
presumptive paraxial mesoderm | 4.86e-09 | 72 |
somatic layer of lateral plate mesoderm | 9.84e-09 | 8 |
organ component layer | 1.38e-08 | 66 |
epithelial vesicle | 2.12e-08 | 78 |
amnion | 3.84e-08 | 7 |
multilaminar epithelium | 6.69e-08 | 83 |
subdivision of head | 2.19e-07 | 49 |
larynx | 2.90e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.66e-07 | 14 |