FFCP PHASE1:Hg19::chr4:123748435..123748456,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2247 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=3676 | |||
|TSSclassifier=strong | |||
|UniProt=P09038 | |||
|association_with_transcript=0bp_to_S47380_5end | |||
|cluster_id=chr4:123748435..123748456,+ | |||
|description=CAGE_peak_2_at_FGF2_5end | |||
|id=chr4:123748435..123748456,+ | |||
|ontology_enrichment_celltype=CL:0000055!6.58e-27!180;CL:0000057!1.55e-17!75;CL:0000359!1.87e-10!32;CL:0000393!7.50e-10!60;CL:0000211!7.50e-10!60;CL:0000680!1.17e-09!57;CL:0000056!1.17e-09!57;CL:0000355!1.17e-09!57;CL:0000192!9.45e-09!42;CL:0000514!9.45e-09!42;CL:0000187!1.27e-08!54;CL:0002334!8.44e-08!12;CL:0002620!5.42e-07!23;CL:0000183!6.81e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.52e-13;32!CL:0002539;7.25e-09;10!CL:0002595;3.34e-08;5!CL:0002334;7.28e-08;12!CL:0000192;2.73e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,9.17e-14,32;CL:0000057,1.56e-11,76;CL:0000048,2.33e-10,427;CL:0000723,5.57e-10,433;CL:0000034,1.71e-09,441;CL:0000393,2.17e-09,61;CL:0000211,2.17e-09,61;CL:0000192,3.10e-09,43;CL:0000514,3.10e-09,43;CL:0002539,7.02e-09,10;CL:0002595,4.19e-08,5;CL:0002334,7.60e-08,12;CL:0000680,7.49e-07,58;CL:0000056,7.49e-07,58;CL:0000355,7.49e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000514;2.73e-07;43 | |||
|ontology_enrichment_disease=DOID:2394!6.04e-09!14;DOID:193!3.87e-07!29 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.47e-17;14!DOID:193;6.98e-12;29!DOID:120;3.77e-11;27 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.38e-17,14;DOID:193,6.47e-12,29;DOID:120,4.05e-11,27 | |||
|ontology_enrichment_uberon=UBERON:0004573!1.57e-09!33;UBERON:0004571!1.57e-09!33;UBERON:0004290!2.34e-09!70;UBERON:0000914!2.70e-09!83;UBERON:0002329!2.70e-09!83;UBERON:0003077!2.70e-09!83;UBERON:0003059!2.70e-09!83;UBERON:0007282!2.70e-09!83;UBERON:0009618!2.70e-09!83;UBERON:0007285!2.70e-09!83;UBERON:0001134!1.43e-08!61;UBERON:0002036!1.43e-08!61;UBERON:0003082!1.43e-08!61;UBERON:0001637!3.84e-08!42;UBERON:0003509!3.84e-08!42;UBERON:0004572!3.84e-08!42;UBERON:0002385!6.92e-08!63;UBERON:0001015!6.92e-08!63;UBERON:0000383!6.92e-08!63;UBERON:0000486!9.45e-08!82;UBERON:0000992!4.30e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;7.49e-14;33!UBERON:0004571;7.49e-14;33!UBERON:0000992;6.71e-13;13!UBERON:0002118;1.62e-11;5!UBERON:0002119;1.14e-09;4!UBERON:0004237;7.25e-09;10!UBERON:0004695;7.25e-09;10!UBERON:0002111;7.25e-09;10!UBERON:0004178;7.25e-09;10!UBERON:0001637;1.37e-08;42!UBERON:0003509;1.37e-08;42!UBERON:0004572;1.37e-08;42!UBERON:0003834;3.34e-08;5!UBERON:0001533;3.34e-08;5!UBERON:0003134;6.50e-08;33!UBERON:0000991;2.74e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,4.55e-15,33;UBERON:0004571,4.55e-15,33;UBERON:0000992,6.33e-13,13;UBERON:0001637,2.43e-12,42;UBERON:0003509,2.43e-12,42;UBERON:0004572,2.43e-12,42;UBERON:0002118,1.55e-11,5;UBERON:0002119,1.10e-09,4;UBERON:0004237,7.02e-09,10;UBERON:0004695,7.02e-09,10;UBERON:0002111,7.02e-09,10;UBERON:0004178,7.02e-09,10;UBERON:0004872,4.00e-08,83;UBERON:0003834,4.19e-08,5;UBERON:0001533,4.19e-08,5;UBERON:0003134,1.24e-07,37;UBERON:0000474,1.24e-07,37;UBERON:0007500,1.55e-07,59;UBERON:0001981,1.55e-07,59;UBERON:0004537,1.55e-07,59;UBERON:0006965,1.55e-07,59;UBERON:0000991,2.65e-07,21;UBERON:0009196,2.65e-07,21;UBERON:0009117,2.65e-07,21;UBERON:0005564,2.65e-07,21;UBERON:0007524,4.20e-07,73;UBERON:0004176,6.83e-07,22 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.140954404095971,2.00146596706261,0.446961094427288,1.74467704820074,0,0.631719873426831,0,0,0,0,0,0,1.98838425436749,10.7572023432284,3.61616716814386,5.11217063271161,2.43966399395253,0.123121058076788,0.408001382488506,0,0,0.410623275218653,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0.50133791063589,0.869079113764942,0,0.973269740605272,0,0.221729397462564,0.175669571386252,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.25326102332916,0.794455084879313,1.14734648299525,1.41867352879343,3.36406560085384,0,0.24666754841716,0,1.34710672069688,0.326923806226917,0,0.576175924479999,0.234321431833797,0,0,0.149448680551801,0.469737994575059,0.647491777472526,0.140450806702248,0,0.368502951935304,0.103325781175765,2.37600571456411,2.22540236350701,0.910161361938026,0.718618141816238,0,0.250237039743928,0,0,4.90380473278431,1.95309476578576,0.226864366320042,2.33206526395521,0.640672166455702,0.635795703478686,0.300091096084402,0.618315175430633,1.28820270022815,1.48893485065272,0.675105328965065,1.85130309806277,1.00973509697646,0.552299391853796,0.484938170456436,0.710019185033229,1.30977727695932,0.169560592310488,0,0,0,0.487894824518382,0.927708378250397,0.580969714347592,0.829288440122964,0.756962552626885,2.18986415445498,6.25798129319264,1.92972281457866,0,0,0,0.828147600278907,0.337169380156203,0.723033089650446,1.54411561825352,0.871517776369625,0.474541238222193,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0.325808305310325,1.03993478527958,0,0,0,0,0.462985512576611,0.380508304469197,0,0,0,0,0,0,0,0,0.0895585227028483,0.290633938513962,0,0,0.088048434013226,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0.517086863031111,0,0.845302752556,0.26593811658487,0,0,0,0.266422179016099,0.428933980974443,0,0,0.325736184293735,0,0,0.301439377059586,0.871533458600294,2.29937879718731,0,0,0,0.239624855491583,0,0,0.868687840005475,1.84928690295345,0.179060963239896,0,0,0,0,0,0,1.54657762555539,0,0,0,0,0,0,0,0.271265023699736,0.623912584592421,9.63516539504674,2.36553622550902,1.17141414992713,0,0,1.03473071292505,0.664225598535437,0.184369168541703,0.60818530127658,0,0,0,0,0,0,0,0,0.992431231275107,0.153461973288062,1.96462066103151,1.92208723883551,1.02341449813341,0.965123526861645,1.48418066444991,0.771048469013278,1.06537035187876,0.328508624055237,1.03850885836724,1.74315567689939,0,0,0.184161977871793,0.574072240823034,1.63882051206045,0.393373244878272,0.451199612907412,0.385076685522074,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0.650756789328606,0.103041011647722,0,0,0,0,0,0.386682873168488,0.616194468458578,0.460511024178389,0.964856007391714,0.322260734604821,0.435050081742686,0.255679882248303,0,0,0,0,0.10115778085555,6.507837690162,2.20368642781448,0.6970372701606,0,0.532306030317022,0,0.18532421910392,2.28999818787186,0,0,0.38126038784765,0,0.855877976067841,0.318203247925937,3.92474320099615,0,0.823611089208164,0.824686816419805,0.404364963146632,1.58510321173008,4.63384301862879,0,3.65570234446927,3.16950440270266,0.272999822815972,0.989838023675989,1.13008116620243,0.551365343546124,1.32687795048244,3.06915619677634,0,0,0.202910376962704,0.6196469961995,0,0.430234056612155,0.196498082026242,0,0,1.26664581178598,1.97576935775941,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0.121360521749513,0,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0.211125408127993,0.398495976502139,0.276283915531148,0,0.306806047506464,0,0.933118762985422,0.269605053441981,0.179021174675609,0,0.197286811273867,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0.694499979733169,0,0.241192877250816,0,0.221158519862449,0.591095237907095,0.219385397153973,0.10893846351899,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0.588187602953219,0,0,0,1.47698645169619,0.163232808159148,0,0,0,0.353830258013357,0,0,0,0,0,0,0.937057782901357,0,0,0,0,0,0.30607276163049,0,0.300646838828985,0,0,0.661983911750998,0.627865836814451,0,0,0.554698692052555,0.173559738335131,0,0,0,0.51595809741485,0.0967563312890851,0.0730893170861856,0.0821154570532092,0,0,0,0.137041924646751,0,0,0,0,0.213452994739353,0,0,0,0,0.288109595976299,0,0,0.135904206073614,0.104602846312333,0,0,0,0,0,1.71906176567983,0,0.558564802544508,0.229160424011684,0.717873024576814,0,0,0,0,3.24269895188163,0,0,0,0,0.295282444544246,0,0,0.681017030557878,1.12527203925513,1.78801267576404,5.40072439437941,0,0,0.121499113316049,0,0,0.104909176269996,0,0.35857467866569,0,0,0,0.25426853765475,1.62899880526114,6.04955043840887,0.326587360109409,0,0,1.02232813071253,0.226624183040251,0,0,0.646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| |||
|short_description=p2@FGF2 | |||
}} |
Latest revision as of 01:03, 25 September 2015
Short description: | p2@FGF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FGF2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_S47380_5end |
EntrezGene: | FGF2 |
HGNC: | 3676 |
UniProt: | P09038 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 9.17e-14 | 32 |
fibroblast | 1.56e-11 | 76 |
multi fate stem cell | 2.33e-10 | 427 |
somatic stem cell | 5.57e-10 | 433 |
stem cell | 1.71e-09 | 441 |
electrically responsive cell | 2.17e-09 | 61 |
electrically active cell | 2.17e-09 | 61 |
smooth muscle cell | 3.10e-09 | 43 |
smooth muscle myoblast | 3.10e-09 | 43 |
aortic smooth muscle cell | 7.02e-09 | 10 |
smooth muscle cell of the subclavian artery | 4.19e-08 | 5 |
preadipocyte | 7.60e-08 | 12 |
muscle precursor cell | 7.49e-07 | 58 |
myoblast | 7.49e-07 | 58 |
multi-potent skeletal muscle stem cell | 7.49e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
systemic artery | 4.55e-15 | 33 |
systemic arterial system | 4.55e-15 | 33 |
female gonad | 6.33e-13 | 13 |
artery | 2.43e-12 | 42 |
arterial blood vessel | 2.43e-12 | 42 |
arterial system | 2.43e-12 | 42 |
right ovary | 1.55e-11 | 5 |
left ovary | 1.10e-09 | 4 |
blood vessel smooth muscle | 7.02e-09 | 10 |
arterial system smooth muscle | 7.02e-09 | 10 |
artery smooth muscle tissue | 7.02e-09 | 10 |
aorta smooth muscle tissue | 7.02e-09 | 10 |
splanchnic layer of lateral plate mesoderm | 4.00e-08 | 83 |
thoracic segment blood vessel | 4.19e-08 | 5 |
subclavian artery | 4.19e-08 | 5 |
female reproductive organ | 1.24e-07 | 37 |
female reproductive system | 1.24e-07 | 37 |
epithelial tube open at both ends | 1.55e-07 | 59 |
blood vessel | 1.55e-07 | 59 |
blood vasculature | 1.55e-07 | 59 |
vascular cord | 1.55e-07 | 59 |
gonad | 2.65e-07 | 21 |
indifferent external genitalia | 2.65e-07 | 21 |
indifferent gonad | 2.65e-07 | 21 |
gonad primordium | 2.65e-07 | 21 |
dense mesenchyme tissue | 4.20e-07 | 73 |
external genitalia | 6.83e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.38e-17 | 14 |
reproductive organ cancer | 6.47e-12 | 29 |
female reproductive organ cancer | 4.05e-11 | 27 |