FFCP PHASE1:Hg19::chr5:96271775..96271832,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4012 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=6656 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UIQ6 | |||
|association_with_transcript=429bp_to_NM_005575,uc003kmv.1_5end | |||
|cluster_id=chr5:96271775..96271832,+ | |||
|description=CAGE_peak_1_at_LNPEP_5end | |||
|id=chr5:96271775..96271832,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.77e-28!140;CL:0000037!6.54e-24!172;CL:0000566!6.54e-24!172;CL:0002032!1.79e-21!165;CL:0000837!1.79e-21!165;CL:0002031!4.61e-21!124;CL:0002087!7.16e-21!119;CL:0000988!3.88e-20!182;CL:0000542!9.35e-18!53;CL:0000051!9.35e-18!53;CL:0000838!1.12e-17!52;CL:0000791!1.70e-11!18;CL:0000789!1.70e-11!18;CL:0002420!1.70e-11!18;CL:0002419!1.70e-11!18;CL:0000790!1.70e-11!18;CL:0000084!4.57e-11!25;CL:0000827!4.57e-11!25;CL:0000625!2.52e-08!11;CL:0000766!2.58e-08!76;CL:0000763!2.78e-07!112;CL:0000049!2.78e-07!112;CL:0000557!7.04e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.70e-11;18!CL:0000789;1.70e-11;18!CL:0002419;1.70e-11;18!CL:0000084;4.54e-11;25!CL:0000542;1.14e-10;53!CL:0000625;2.47e-08;11!CL:0002087;5.51e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.29e-30,136;CL:0000037,1.57e-25,168;CL:0002032,5.04e-23,161;CL:0000837,5.04e-23,161;CL:0002031,6.53e-23,120;CL:0002087,9.23e-23,115;CL:0000988,3.95e-22,177;CL:0000542,9.35e-18,53;CL:0000051,9.35e-18,53;CL:0000838,1.12e-17,52;CL:0000791,1.70e-11,18;CL:0000789,1.70e-11,18;CL:0002420,1.70e-11,18;CL:0002419,1.70e-11,18;CL:0000790,1.70e-11,18;CL:0000084,4.57e-11,25;CL:0000827,4.57e-11,25;CL:0000766,1.19e-09,72;CL:0000625,2.52e-08,11;CL:0000763,3.16e-08,108;CL:0000049,3.16e-08,108;CL:0000557,4.30e-08,67;CL:0000839,3.92e-07,66 | |||
|ontology_enrichment_development_v019=CL:0000790;1.70e-11;18!CL:0000051;1.14e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.99e-14!115;UBERON:0002390!9.87e-11!102;UBERON:0003061!9.87e-11!102;UBERON:0002193!1.37e-09!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.81e-14,114;UBERON:0002390,4.74e-12,98;UBERON:0003061,4.74e-12,98;UBERON:0002193,9.77e-11,108;UBERON:0002405,5.11e-07,93 | |||
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| |||
|short_description=p1@LNPEP | |||
}} |
Latest revision as of 09:45, 19 September 2015
Short description: | p1@LNPEP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LNPEP_5end |
Coexpression cluster: | NA |
Association with transcript: | 429bp_to_NM_005575, uc003kmv.1_5end |
EntrezGene: | LNPEP |
HGNC: | 6656 |
UniProt: | Q9UIQ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.29e-30 | 136 |
hematopoietic stem cell | 1.57e-25 | 168 |
hematopoietic oligopotent progenitor cell | 5.04e-23 | 161 |
hematopoietic multipotent progenitor cell | 5.04e-23 | 161 |
hematopoietic lineage restricted progenitor cell | 6.53e-23 | 120 |
nongranular leukocyte | 9.23e-23 | 115 |
hematopoietic cell | 3.95e-22 | 177 |
lymphocyte | 9.35e-18 | 53 |
common lymphoid progenitor | 9.35e-18 | 53 |
lymphoid lineage restricted progenitor cell | 1.12e-17 | 52 |
mature alpha-beta T cell | 1.70e-11 | 18 |
alpha-beta T cell | 1.70e-11 | 18 |
immature T cell | 1.70e-11 | 18 |
mature T cell | 1.70e-11 | 18 |
immature alpha-beta T cell | 1.70e-11 | 18 |
T cell | 4.57e-11 | 25 |
pro-T cell | 4.57e-11 | 25 |
myeloid leukocyte | 1.19e-09 | 72 |
CD8-positive, alpha-beta T cell | 2.52e-08 | 11 |
myeloid cell | 3.16e-08 | 108 |
common myeloid progenitor | 3.16e-08 | 108 |
granulocyte monocyte progenitor cell | 4.30e-08 | 67 |
myeloid lineage restricted progenitor cell | 3.92e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.81e-14 | 114 |
hematopoietic system | 4.74e-12 | 98 |
blood island | 4.74e-12 | 98 |
hemolymphoid system | 9.77e-11 | 108 |
immune system | 5.11e-07 | 93 |