FFCP PHASE1:Hg19::chr6:117852527..117852528,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:117852527..117852528,+ | |||
|description=CAGE_peak_at_chr6:117852527..117852528,+ | |||
|id=chr6:117852527..117852528,+ | |||
|ontology_enrichment_celltype=CL:0000666!1.11e-07!4;CL:0002188!1.11e-07!4;CL:0002195!8.07e-07!2;CL:0002571!8.07e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002188;2.14e-15;5!CL:1000449;1.55e-13;15!CL:1000497;6.35e-12;17!CL:0002518;6.35e-12;17!CL:0002681;3.71e-11;12!CL:0002584;3.71e-11;12!CL:1000746;3.76e-11;7!CL:1000612;3.76e-11;7!CL:0000244;5.97e-09;4!CL:0000731;5.97e-09;4!CL:0002537;2.01e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002188,2.48e-15,5;CL:1000449,1.68e-13,15;CL:1000497,6.81e-12,17;CL:0002518,6.81e-12,17;CL:0002681,4.13e-11,12;CL:0002584,4.13e-11,12;CL:1000746,4.18e-11,7;CL:1000612,4.18e-11,7;CL:0000244,4.69e-09,4;CL:0000731,4.69e-09,4;CL:0002537,1.66e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000483!1.11e-09!309;UBERON:0000119!1.78e-09!312;UBERON:0000025!2.24e-09!194;UBERON:0001049!2.50e-07!57;UBERON:0005068!2.50e-07!57;UBERON:0006241!2.50e-07!57;UBERON:0007135!2.50e-07!57;UBERON:0002616!5.69e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0000353;1.29e-13;15!UBERON:0006555;1.55e-13;15!UBERON:0004819;1.55e-13;15!UBERON:0001285;1.55e-13;15!UBERON:0007684;1.55e-13;15!UBERON:0006554;1.63e-12;30!UBERON:0001008;1.63e-12;30!UBERON:0001225;3.71e-11;12!UBERON:0008987;3.71e-11;12!UBERON:0000074;3.76e-11;7!UBERON:0001229;3.76e-11;7!UBERON:0001851;5.94e-09;15!UBERON:0002113;2.17e-08;24!UBERON:0011143;2.17e-08;24!UBERON:0000365;2.51e-07;5!UBERON:0000489;6.63e-07;29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000353,1.40e-13,15;UBERON:0004211,1.68e-13,15;UBERON:0009773,1.68e-13,15;UBERON:0001231,1.68e-13,15;UBERON:0001285,1.68e-13,15;UBERON:0007684,1.68e-13,15;UBERON:0004208,1.68e-13,15;UBERON:0006555,1.20e-12,16;UBERON:0004819,1.20e-12,16;UBERON:0001225,4.13e-11,12;UBERON:0008987,4.13e-11,12;UBERON:0010532,4.18e-11,7;UBERON:0000074,4.18e-11,7;UBERON:0001229,4.18e-11,7;UBERON:0001230,4.18e-11,7;UBERON:0003220,4.18e-11,7;UBERON:0005749,4.18e-11,7;UBERON:0004199,4.18e-11,7;UBERON:0004209,4.18e-11,7;UBERON:0004198,4.18e-11,7;UBERON:0005103,8.84e-10,8;UBERON:0000083,8.84e-10,8;UBERON:0009201,8.84e-10,8;UBERON:0006553,8.84e-10,8;UBERON:0003074,8.84e-10,8;UBERON:0003060,8.84e-10,8;UBERON:0001851,6.46e-09,15;UBERON:0000080,9.55e-09,9;UBERON:0002120,9.55e-09,9;UBERON:0004875,9.55e-09,9;UBERON:0005721,9.55e-09,9;UBERON:0005754,9.55e-09,9;UBERON:0007297,9.55e-09,9;UBERON:0006554,1.03e-07,47;UBERON:0002113,1.04e-07,26;UBERON:0003918,1.04e-07,26;UBERON:0011143,1.04e-07,26;UBERON:0005095,1.04e-07,26;UBERON:0007687,1.04e-07,26;UBERON:0001008,1.55e-07,48;UBERON:0000365,2.07e-07,5;UBERON:0004876,3.08e-07,11;UBERON:0000058,4.00e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0.85870796139317,0.410623275218653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.805658634218294,0,0,0,0,0.446498641420399,0.898117490504679,0,0,0,0,0,0,0,0.993943903390637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78060238804945,1.68540968042698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.60967095213783,0,0,0,0,0,0,0,0,0,0,1.3068766413512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86156681609409,5.2003718455683,0,0,0,0.714889968290738,0,0,0,1.42156779497018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,2.22568688486155,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.710246901252508,0,0,0,0,0,0,0,0,0,2.25599806453706,0.0770153371044148,2.35304930753057,0,0,2.27466768141793,0,2.15915916102139,3.08454505380579,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0.366277859273374,0,0,0,0,0,0,0,1.7918754422989,0,0,0.596586391912706,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0.54907405947211,0.942499218765491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0.563391205064483,0,0,0,0,0,0,0,0,0,0,0,0,2.58303223602738,0,1.7737206141467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318852545457645,0,0,0,0,0,0,5.01375666473674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,4.42870692906919,0,1.52581736317083,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551482276150566,0.164831716762333,0.26961417541674,0,0,0.795229689809303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.366078794705889,0.1251909307065,1.72022758707021,0,0,0,0,0,0,0,0,0,0,0,0,0.947015026375446,0,0,0,0,1.5543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,1.13352962756136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48830904013189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56215619722769,0,0,0,0,0,0,0,0.535701835878287,0,1.21393120847326,0,0.0887023701626388,0.230467975111559,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0.392616934229891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:117852527..117852528,+ | |||
}} |
Latest revision as of 18:44, 30 July 2015
Short description: | p@chr6:117852527..117852528, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:117852527..117852528, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular endothelial cell | 2.48e-15 | 5 |
epithelial cell of nephron | 1.68e-13 | 15 |
kidney cell | 6.81e-12 | 17 |
kidney epithelial cell | 6.81e-12 | 17 |
kidney cortical cell | 4.13e-11 | 12 |
renal cortical epithelial cell | 4.13e-11 | 12 |
glomerular cell | 4.18e-11 | 7 |
kidney corpuscule cell | 4.18e-11 | 7 |
transitional epithelial cell | 4.69e-09 | 4 |
urothelial cell | 4.69e-09 | 4 |
amnion mesenchymal stem cell | 1.66e-07 | 5 |