FFCP PHASE1:Hg19::chr6:31830633..31830644,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4758 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7758 | |||
|TSSclassifier=strong | |||
|UniProt=E9PIF4 | |||
|association_with_transcript=-34bp_to_ENST00000491768_5end | |||
|cluster_id=chr6:31830633..31830644,- | |||
|description=CAGE_peak_2_at_NEU1_5end | |||
|id=chr6:31830633..31830644,- | |||
|ontology_enrichment_celltype=CL:0002371!1.63e-18!591;CL:0002057!1.32e-17!42;CL:0000144!4.14e-17!625;CL:0000860!1.14e-15!45;CL:0000766!5.60e-15!76;CL:0000548!1.66e-14!679;CL:0000004!1.66e-14!679;CL:0000255!1.66e-14!679;CL:0002009!2.97e-14!65;CL:0000012!3.20e-14!682;CL:0002194!9.67e-14!63;CL:0000576!9.67e-14!63;CL:0000040!9.67e-14!63;CL:0000559!9.67e-14!63;CL:0000557!1.21e-13!71;CL:0000839!2.97e-13!70;CL:0000003!2.57e-12!722;CL:0000048!1.38e-11!430;CL:0000723!3.41e-11!436;CL:0000063!1.83e-10!578;CL:0000034!5.92e-10!444;CL:0000763!1.25e-08!112;CL:0000049!1.25e-08!112;CL:0000134!1.88e-07!358;CL:0002320!4.82e-07!365;CL:0000222!4.93e-07!119;CL:0000192!8.26e-07!42;CL:0000514!8.26e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.61e-16;33!CL:0002057;1.61e-16;33!CL:0000473;1.15e-12;39!CL:0000234;1.15e-12;39!CL:0000576;1.24e-11;48!CL:0000766;2.07e-08;69!CL:1000497;6.99e-07;17!CL:0002518;6.99e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.85e-19,42;CL:0002057,3.85e-19,42;CL:0000766,1.02e-17,72;CL:0000473,1.04e-17,48;CL:0000234,1.04e-17,48;CL:0002009,4.70e-17,61;CL:0000557,1.76e-16,67;CL:0002194,1.80e-16,59;CL:0000576,1.80e-16,59;CL:0000040,1.80e-16,59;CL:0000559,1.80e-16,59;CL:0000839,1.02e-15,66;CL:0000048,4.06e-13,427;CL:0000723,1.68e-12,433;CL:0000034,2.15e-11,441;CL:0000763,1.94e-10,108;CL:0000049,1.94e-10,108;CL:0000134,1.61e-09,354;CL:0002320,6.73e-09,361;CL:0000219,3.23e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.13e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!8.27e-22!216;UBERON:0000926!1.65e-15!448;UBERON:0004120!1.65e-15!448;UBERON:0006603!1.65e-15!448;UBERON:0002405!3.39e-12!115;UBERON:0002204!4.64e-12!167;UBERON:0002371!5.57e-12!80;UBERON:0001474!1.38e-11!86;UBERON:0003914!1.40e-11!118;UBERON:0004765!8.71e-11!101;UBERON:0001434!8.71e-11!101;UBERON:0000055!1.45e-10!69;UBERON:0002193!5.46e-10!112;UBERON:0002049!1.25e-09!79;UBERON:0007798!1.25e-09!79;UBERON:0001981!2.64e-09!60;UBERON:0007500!2.64e-09!60;UBERON:0004537!2.64e-09!60;UBERON:0006965!2.64e-09!60;UBERON:0001637!3.28e-09!42;UBERON:0003509!3.28e-09!42;UBERON:0004572!3.28e-09!42;UBERON:0002390!7.33e-09!102;UBERON:0003061!7.33e-09!102;UBERON:0004872!3.16e-08!84;UBERON:0000480!3.73e-08!626;UBERON:0000467!4.21e-08!625;UBERON:0004535!7.59e-08!110;UBERON:0001009!1.41e-07!113;UBERON:0004573!2.04e-07!33;UBERON:0004571!2.04e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.73e-07;42!UBERON:0003509;1.73e-07;42!UBERON:0004572;1.73e-07;42!UBERON:0003914;6.07e-07;74!UBERON:0004573;6.18e-07;33!UBERON:0004571;6.18e-07;33!UBERON:0000055;7.74e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,5.58e-22,203;UBERON:0002371,3.02e-15,76;UBERON:0001474,2.56e-14,82;UBERON:0000926,4.69e-14,315;UBERON:0004120,4.69e-14,315;UBERON:0006603,4.69e-14,315;UBERON:0002405,1.98e-13,93;UBERON:0002193,5.14e-12,108;UBERON:0003914,6.34e-12,117;UBERON:0004765,7.02e-12,90;UBERON:0002204,3.39e-11,167;UBERON:0001434,5.36e-11,100;UBERON:0000055,7.89e-11,68;UBERON:0002390,9.38e-11,98;UBERON:0003061,9.38e-11,98;UBERON:0001637,1.15e-09,42;UBERON:0003509,1.15e-09,42;UBERON:0004572,1.15e-09,42;UBERON:0007500,2.02e-09,59;UBERON:0001981,2.02e-09,59;UBERON:0004537,2.02e-09,59;UBERON:0006965,2.02e-09,59;UBERON:0002049,3.04e-09,78;UBERON:0007798,3.04e-09,78;UBERON:0004872,2.46e-08,83;UBERON:0002384,8.54e-08,371;UBERON:0004535,9.89e-08,109;UBERON:0004573,1.17e-07,33;UBERON:0004571,1.17e-07,33;UBERON:0001009,1.93e-07,112 | |||
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| |||
|short_description=p2@NEU1 | |||
}} |
Latest revision as of 00:45, 18 September 2015
Short description: | p2@NEU1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NEU1_5end |
Coexpression cluster: | NA |
Association with transcript: | -34bp_to_ENST00000491768_5end |
EntrezGene: | NEU1 |
HGNC: | 7758 |
UniProt: | E9PIF4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.85e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.85e-19 | 42 |
myeloid leukocyte | 1.02e-17 | 72 |
defensive cell | 1.04e-17 | 48 |
phagocyte | 1.04e-17 | 48 |
macrophage dendritic cell progenitor | 4.70e-17 | 61 |
granulocyte monocyte progenitor cell | 1.76e-16 | 67 |
monopoietic cell | 1.80e-16 | 59 |
monocyte | 1.80e-16 | 59 |
monoblast | 1.80e-16 | 59 |
promonocyte | 1.80e-16 | 59 |
myeloid lineage restricted progenitor cell | 1.02e-15 | 66 |
multi fate stem cell | 4.06e-13 | 427 |
somatic stem cell | 1.68e-12 | 433 |
stem cell | 2.15e-11 | 441 |
myeloid cell | 1.94e-10 | 108 |
common myeloid progenitor | 1.94e-10 | 108 |
mesenchymal cell | 1.61e-09 | 354 |
connective tissue cell | 6.73e-09 | 361 |
motile cell | 3.23e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 5.58e-22 | 203 |
bone marrow | 3.02e-15 | 76 |
bone element | 2.56e-14 | 82 |
mesoderm | 4.69e-14 | 315 |
mesoderm-derived structure | 4.69e-14 | 315 |
presumptive mesoderm | 4.69e-14 | 315 |
immune system | 1.98e-13 | 93 |
hemolymphoid system | 5.14e-12 | 108 |
epithelial tube | 6.34e-12 | 117 |
skeletal element | 7.02e-12 | 90 |
musculoskeletal system | 3.39e-11 | 167 |
skeletal system | 5.36e-11 | 100 |
vessel | 7.89e-11 | 68 |
hematopoietic system | 9.38e-11 | 98 |
blood island | 9.38e-11 | 98 |
artery | 1.15e-09 | 42 |
arterial blood vessel | 1.15e-09 | 42 |
arterial system | 1.15e-09 | 42 |
epithelial tube open at both ends | 2.02e-09 | 59 |
blood vessel | 2.02e-09 | 59 |
blood vasculature | 2.02e-09 | 59 |
vascular cord | 2.02e-09 | 59 |
vasculature | 3.04e-09 | 78 |
vascular system | 3.04e-09 | 78 |
splanchnic layer of lateral plate mesoderm | 2.46e-08 | 83 |
connective tissue | 8.54e-08 | 371 |
cardiovascular system | 9.89e-08 | 109 |
systemic artery | 1.17e-07 | 33 |
systemic arterial system | 1.17e-07 | 33 |
circulatory system | 1.93e-07 | 112 |