FFCP PHASE1:Mm9::chr2:30567865..30567869,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=280|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:30567865..30567869,+|id=chr2:30567865..30567869,+|ontology_enrichment_celltype=CL:0000791!1.54e-14!9;CL:0000789!1.54e-14!9;CL:0002420!1.54e-14!9;CL:0002419!1.54e-14!9;CL:0000790!1.54e-14!9;CL:0000838!4.56e-13!12;CL:0000624!7.76e-13!8;CL:0000542!7.28e-12!13;CL:0000051!7.28e-12!13;CL:0000084!1.69e-11!11;CL:0000827!1.69e-11!11;CL:0000893!1.57e-09!6;CL:0002489!1.57e-09!6;CL:0000898!1.57e-09!6;CL:0000809!1.57e-09!6;CL:0000810!1.57e-09!6;CL:0000895!1.57e-09!6;CL:0000808!1.57e-09!6;CL:0000894!1.57e-09!6;CL:0000806!1.57e-09!6;CL:0000807!1.57e-09!6;CL:0000805!1.57e-09!6;CL:0002425!1.57e-09!6;CL:0002436!1.57e-09!6;CL:0002427!1.57e-09!6;CL:0002428!1.57e-09!6;CL:0002429!1.57e-09!6;CL:0002433!1.57e-09!6;CL:0002431!1.57e-09!6;CL:0002432!1.57e-09!6;CL:0000738!1.74e-08!17;CL:0002087!1.74e-08!17;CL:0000988!2.84e-07!32;CL:0002032!2.84e-07!32;CL:0000037!2.84e-07!32;CL:0000566!2.84e-07!32;CL:0000837!2.84e-07!32|ontology_enrichment_celltype_v019_2=CL:0000838,2.94e-12,12;CL:0000542,2.42e-11,13;CL:0000051,2.42e-11,13;CL:0000625,2.01e-10,1;CL:0000945,3.74e-10,1;CL:0000236,3.74e-10,1;CL:0000826,3.74e-10,1;CL:0000213,4.59e-10,1;CL:0002078,4.59e-10,1;CL:0000115,4.59e-10,1;CL:0002262,4.59e-10,1;CL:1000398,4.59e-10,1;CL:0000815,6.88e-10,1;CL:0000792,6.88e-10,1;CL:0000791,1.37e-09,9;CL:0000789,1.37e-09,9;CL:0002420,1.37e-09,9;CL:0002419,1.37e-09,9;CL:0000790,1.37e-09,9;CL:0000738,9.54e-09,17;CL:0002087,9.54e-09,17;CL:0000084,5.99e-08,11;CL:0000827,5.99e-08,11|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002394,4.59e-10,1;UBERON:0001281,4.59e-10,1;UBERON:0000353,4.59e-10,1;UBERON:0003497,4.59e-10,1;UBERON:0003909,4.59e-10,1;UBERON:0003928,4.59e-10,1;UBERON:0003835,4.59e-10,1;UBERON:0003513,4.59e-10,1;UBERON:0001280,4.59e-10,1;UBERON:0004647,4.59e-10,1;UBERON:0002294,4.59e-10,1;UBERON:0001173,4.59e-10,1;UBERON:0004912,4.59e-10,1;UBERON:0005171,4.59e-10,1|phase1_expression=0,0,0,0,0,0,0,1.16210991097419,0.281577444303333,0.468129052643987,0.68487187290202,0.0797721589953364,0.856003649656029,0.34968160967599,0,0,0,0,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0.218025156380447,0,0.194429899074283,0.139986421625363,0,1.8456086666351,4.35217285206807,3.6970317905671,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,1.44932244350839,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.11418387971906,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0.209446706813455,0,0.359445373517761,0.599902730993408,0.381210681219194,0.149790639404823,0,0,0.173824320192276,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0.315508219416257,0,0,0.238968797952552,0,0,0,0.584511715822624,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0.307435147943927,0,0,0,0,0,0,1.02131881726136,0,0,0,0,0.178368817602071,0.329098041204242,1.2178597964584,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,3.56954702987096,3.21888340344413,1.10559979043539,0,0,0,0,0.209088296014469,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0.116876902181569,0.226730383615211,0,0,0,0.19318959403219,0,0.183151624267265,0,0.501572104035363,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr2:30567865..30567869,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=280 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:30567865..30567869,+ | |||
|description=CAGE_peak_at_chr2:30567865..30567869,+ | |||
|id=chr2:30567865..30567869,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.54e-14!9;CL:0000789!1.54e-14!9;CL:0002420!1.54e-14!9;CL:0002419!1.54e-14!9;CL:0000790!1.54e-14!9;CL:0000838!4.56e-13!12;CL:0000624!7.76e-13!8;CL:0000542!7.28e-12!13;CL:0000051!7.28e-12!13;CL:0000084!1.69e-11!11;CL:0000827!1.69e-11!11;CL:0000893!1.57e-09!6;CL:0002489!1.57e-09!6;CL:0000898!1.57e-09!6;CL:0000809!1.57e-09!6;CL:0000810!1.57e-09!6;CL:0000895!1.57e-09!6;CL:0000808!1.57e-09!6;CL:0000894!1.57e-09!6;CL:0000806!1.57e-09!6;CL:0000807!1.57e-09!6;CL:0000805!1.57e-09!6;CL:0002425!1.57e-09!6;CL:0002436!1.57e-09!6;CL:0002427!1.57e-09!6;CL:0002428!1.57e-09!6;CL:0002429!1.57e-09!6;CL:0002433!1.57e-09!6;CL:0002431!1.57e-09!6;CL:0002432!1.57e-09!6;CL:0000738!1.74e-08!17;CL:0002087!1.74e-08!17;CL:0000988!2.84e-07!32;CL:0002032!2.84e-07!32;CL:0000037!2.84e-07!32;CL:0000566!2.84e-07!32;CL:0000837!2.84e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.94e-12,12;CL:0000542,2.42e-11,13;CL:0000051,2.42e-11,13;CL:0000625,2.01e-10,1;CL:0000945,3.74e-10,1;CL:0000236,3.74e-10,1;CL:0000826,3.74e-10,1;CL:0000213,4.59e-10,1;CL:0002078,4.59e-10,1;CL:0000115,4.59e-10,1;CL:0002262,4.59e-10,1;CL:1000398,4.59e-10,1;CL:0000815,6.88e-10,1;CL:0000792,6.88e-10,1;CL:0000791,1.37e-09,9;CL:0000789,1.37e-09,9;CL:0002420,1.37e-09,9;CL:0002419,1.37e-09,9;CL:0000790,1.37e-09,9;CL:0000738,9.54e-09,17;CL:0002087,9.54e-09,17;CL:0000084,5.99e-08,11;CL:0000827,5.99e-08,11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,4.59e-10,1;UBERON:0001281,4.59e-10,1;UBERON:0000353,4.59e-10,1;UBERON:0003497,4.59e-10,1;UBERON:0003909,4.59e-10,1;UBERON:0003928,4.59e-10,1;UBERON:0003835,4.59e-10,1;UBERON:0003513,4.59e-10,1;UBERON:0001280,4.59e-10,1;UBERON:0004647,4.59e-10,1;UBERON:0002294,4.59e-10,1;UBERON:0001173,4.59e-10,1;UBERON:0004912,4.59e-10,1;UBERON:0005171,4.59e-10,1 | |||
|phase1_expression=0,0,0,0,0,0,0,1.16210991097419,0.281577444303333,0.468129052643987,0.68487187290202,0.0797721589953364,0.856003649656029,0.34968160967599,0,0,0,0,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0.218025156380447,0,0.194429899074283,0.139986421625363,0,1.8456086666351,4.35217285206807,3.6970317905671,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,1.44932244350839,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.11418387971906,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0.209446706813455,0,0.359445373517761,0.599902730993408,0.381210681219194,0.149790639404823,0,0,0.173824320192276,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0.315508219416257,0,0,0.238968797952552,0,0,0,0.584511715822624,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0.307435147943927,0,0,0,0,0,0,1.02131881726136,0,0,0,0,0.178368817602071,0.329098041204242,1.2178597964584,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,3.56954702987096,3.21888340344413,1.10559979043539,0,0,0,0,0.209088296014469,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0.116876902181569,0.226730383615211,0,0,0,0.19318959403219,0,0.183151624267265,0,0.501572104035363,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:30567865..30567869,+ | |||
}} |
Latest revision as of 00:15, 5 August 2015
Short description: | p@chr2:30567865..30567869, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:30567865..30567869, + |
Coexpression cluster: | MCL_coexpression_mm9:280 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 2.94e-12 | 12 |
lymphocyte | 2.42e-11 | 13 |
common lymphoid progenitor | 2.42e-11 | 13 |
CD8-positive, alpha-beta T cell | 2.01e-10 | 1 |
lymphocyte of B lineage | 3.74e-10 | 1 |
B cell | 3.74e-10 | 1 |
pro-B cell | 3.74e-10 | 1 |
lining cell | 4.59e-10 | 1 |
meso-epithelial cell | 4.59e-10 | 1 |
endothelial cell | 4.59e-10 | 1 |
endothelial cell of sinusoid | 4.59e-10 | 1 |
endothelial cell of hepatic sinusoid | 4.59e-10 | 1 |
regulatory T cell | 6.88e-10 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 6.88e-10 | 1 |
mature alpha-beta T cell | 1.37e-09 | 9 |
alpha-beta T cell | 1.37e-09 | 9 |
immature T cell | 1.37e-09 | 9 |
mature T cell | 1.37e-09 | 9 |
immature alpha-beta T cell | 1.37e-09 | 9 |
leukocyte | 9.54e-09 | 17 |
nongranular leukocyte | 9.54e-09 | 17 |
T cell | 5.99e-08 | 11 |
pro-T cell | 5.99e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
bile duct | 4.59e-10 | 1 |
hepatic sinusoid | 4.59e-10 | 1 |
parenchyma | 4.59e-10 | 1 |
abdomen blood vessel | 4.59e-10 | 1 |
sinusoid | 4.59e-10 | 1 |
digestive system duct | 4.59e-10 | 1 |
abdominal segment blood vessel | 4.59e-10 | 1 |
trunk blood vessel | 4.59e-10 | 1 |
liver parenchyma | 4.59e-10 | 1 |
liver lobule | 4.59e-10 | 1 |
biliary system | 4.59e-10 | 1 |
biliary tree | 4.59e-10 | 1 |
biliary bud | 4.59e-10 | 1 |
hepatic duct | 4.59e-10 | 1 |