FFCP PHASE1:Hg19::chr7:23245408..23245418,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-213bp_to_ENST00000413042,uc003svz.1_5end | |||
|cluster_id=chr7:23245408..23245418,+ | |||
|description=CAGE_peak_6_at_ENST00000413042_5end,CAGE_peak_6_at_uc003svz.1_5end | |||
|id=chr7:23245408..23245418,+ | |||
|ontology_enrichment_celltype=CL:0000239!2.39e-08!3;CL:1000615!2.39e-08!3;CL:0002306!2.39e-08!3;CL:1000507!1.35e-07!12;CL:1000494!1.35e-07!12;CL:0002681!5.17e-07!13;CL:0002584!5.17e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002535;5.04e-34;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,7.05e-34,2 | |||
|ontology_enrichment_development_v019=UBERON:0007297;5.04e-34;2!UBERON:0003918;6.13e-08;10!UBERON:0007687;6.13e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4362;1.60e-14;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,1.83e-14,5 | |||
|ontology_enrichment_uberon=UBERON:0002113!2.50e-09!27;UBERON:0003918!2.50e-09!27;UBERON:0005095!2.50e-09!27;UBERON:0007687!2.50e-09!27;UBERON:0003887!6.55e-09!21;UBERON:0006853!2.39e-08!3;UBERON:0007685!2.39e-08!3;UBERON:0004134!2.39e-08!3;UBERON:0006555!4.85e-08!17;UBERON:0005103!4.85e-08!17;UBERON:0000083!4.85e-08!17;UBERON:0009201!4.85e-08!17;UBERON:0004819!4.85e-08!17;UBERON:0006553!4.85e-08!17;UBERON:0003074!4.85e-08!17;UBERON:0003060!4.85e-08!17;UBERON:0000489!1.01e-07!32;UBERON:0009773!1.35e-07!12;UBERON:0001231!1.35e-07!12;UBERON:0004810!1.35e-07!12;UBERON:0000080!1.41e-07!18;UBERON:0002120!1.41e-07!18;UBERON:0004875!1.41e-07!18;UBERON:0005721!1.41e-07!18;UBERON:0005754!1.41e-07!18;UBERON:0007297!1.41e-07!18;UBERON:0001301!4.33e-07!1;UBERON:0007023!5.07e-07!115;UBERON:0001225!5.17e-07!13;UBERON:0008987!5.17e-07!13;UBERON:0004876!8.71e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;2.39e-66;1!UBERON:0006955;5.04e-34;2!UBERON:0004801;5.04e-34;2!UBERON:0006947;3.27e-23;3!UBERON:0004054;3.27e-23;3!UBERON:0005904;8.69e-18;4!UBERON:0004175;1.09e-13;21!UBERON:0000002;2.45e-12;6!UBERON:0001560;2.45e-12;6!UBERON:0000058;6.13e-08;10!UBERON:0003135;2.47e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,2.39e-66,1;UBERON:0006955,7.05e-34,2;UBERON:0004801,7.05e-34,2;UBERON:0006947,3.27e-23,3;UBERON:0004054,3.27e-23,3;UBERON:0005904,8.69e-18,4;UBERON:0000002,2.74e-12,6;UBERON:0001560,2.74e-12,6;UBERON:0004175,1.15e-11,25;UBERON:0002113,2.63e-11,26;UBERON:0003918,2.63e-11,26;UBERON:0011143,2.63e-11,26;UBERON:0005095,2.63e-11,26;UBERON:0007687,2.63e-11,26;UBERON:0000489,1.15e-09,31;UBERON:0005103,1.35e-09,8;UBERON:0000083,1.35e-09,8;UBERON:0009201,1.35e-09,8;UBERON:0006553,1.35e-09,8;UBERON:0003074,1.35e-09,8;UBERON:0003060,1.35e-09,8;UBERON:0000080,1.12e-08,9;UBERON:0002120,1.12e-08,9;UBERON:0004875,1.12e-08,9;UBERON:0005721,1.12e-08,9;UBERON:0005754,1.12e-08,9;UBERON:0007297,1.12e-08,9;UBERON:0003135,2.47e-07,11;UBERON:0004876,2.47e-07,11;UBERON:0003887,7.92e-07,12;UBERON:0006554,9.72e-07,47 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0.364295288292542,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0.501689773854853,0.254876273045038,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,1.0077309914171,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,1.22308667769421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.86686278029118,1.67854682031994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.0620747142958579,0,0.12729431655633,0.202117188958219,0,0,0.0673520530145875,0,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p6@ENST00000413042,p6@uc003svz.1 | |||
}} |
Latest revision as of 08:39, 31 July 2015
Short description: | p6@ENST00000413042, p6@uc003svz.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ENST00000413042_5end, CAGE_peak_6_at_uc003svz.1_5end |
Coexpression cluster: | NA |
Association with transcript: | -213bp_to_ENST00000413042, uc003svz.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 7.05e-34 | 2 |
Ontology term | p-value | n |
---|---|---|
epididymis | 2.39e-66 | 1 |
uterine epithelium | 7.05e-34 | 2 |
cervix epithelium | 7.05e-34 | 2 |
male genital duct | 3.27e-23 | 3 |
internal male genitalia | 3.27e-23 | 3 |
duct of male reproductive system | 8.69e-18 | 4 |
uterine cervix | 2.74e-12 | 6 |
neck of organ | 2.74e-12 | 6 |
internal genitalia | 1.15e-11 | 25 |
kidney | 2.63e-11 | 26 |
kidney mesenchyme | 2.63e-11 | 26 |
upper urinary tract | 2.63e-11 | 26 |
kidney rudiment | 2.63e-11 | 26 |
kidney field | 2.63e-11 | 26 |
cavitated compound organ | 1.15e-09 | 31 |
mesonephric epithelium | 1.35e-09 | 8 |
mesonephric tubule | 1.35e-09 | 8 |
nephric duct | 1.35e-09 | 8 |
renal duct | 1.35e-09 | 8 |
mesonephric duct | 1.35e-09 | 8 |
pronephric duct | 1.35e-09 | 8 |
mesonephros | 1.12e-08 | 9 |
pronephros | 1.12e-08 | 9 |
nephrogenic cord | 1.12e-08 | 9 |
pronephric mesoderm | 1.12e-08 | 9 |
rostral part of nephrogenic cord | 1.12e-08 | 9 |
presumptive pronephric mesoderm | 1.12e-08 | 9 |
male reproductive organ | 2.47e-07 | 11 |
urogenital ridge | 2.47e-07 | 11 |
intraembryonic coelom | 7.92e-07 | 12 |
urinary system structure | 9.72e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 1.83e-14 | 5 |