FFCP PHASE1:Mm9::chr3:154718305..154718334,-: Difference between revisions
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{{FFCP|EntrezGene=435766|HGNC=|MCL_coexpression_id=19|UniProt=|association_with_transcript=0bp_to_ENSMUST00000146952_5end|description=CAGE_peak_1_at_Tnni3k_5end|id=chr3:154718305..154718334,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!2.18e-22!18;UBERON:0000948!2.18e-22!18;UBERON:0005498!2.18e-22!18;UBERON:0004140!2.18e-22!18;UBERON:0009881!2.18e-22!18;UBERON:0004141!2.18e-22!18;UBERON:0003084!2.18e-22!18;UBERON:0007005!2.18e-22!18;UBERON:0004139!2.18e-22!18;UBERON:0004291!2.18e-22!18;UBERON:0004535!5.45e-18!23;UBERON:0001009!5.45e-18!23;UBERON:0002048!4.24e-12!14;UBERON:0000117!4.24e-12!14;UBERON:0000171!4.24e-12!14;UBERON:0000170!4.24e-12!14;UBERON:0005597!4.24e-12!14;UBERON:0000118!4.24e-12!14;UBERON:0004872!1.65e-10!33;UBERON:0005153!2.79e-09!17;UBERON:0005178!2.79e-09!17;UBERON:0005181!2.79e-09!17;UBERON:0002224!2.79e-09!17;UBERON:0000915!2.79e-09!17;UBERON:0008947!2.79e-09!17;UBERON:0003258!2.79e-09!17;UBERON:0003914!4.52e-07!47|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.43e-44,18;UBERON:0000948,1.43e-44,18;UBERON:0005498,1.43e-44,18;UBERON:0004140,1.43e-44,18;UBERON:0009881,1.43e-44,18;UBERON:0004141,1.43e-44,18;UBERON:0003084,1.43e-44,18;UBERON:0007005,1.43e-44,18;UBERON:0004139,1.43e-44,18;UBERON:0004291,1.43e-44,18;UBERON:0004535,5.01e-34,23;UBERON:0001009,5.01e-34,23;UBERON:0004872,1.60e-22,33;UBERON:0003103,2.28e-16,43;UBERON:0003914,1.21e-14,47;UBERON:0000025,1.57e-09,114;UBERON:0004111,1.46e-08,122;UBERON:0002048,1.79e-08,14;UBERON:0000117,1.79e-08,14;UBERON:0000171,1.79e-08,14;UBERON:0000170,1.79e-08,14;UBERON:0005597,1.79e-08,14;UBERON:0000118,1.79e-08,14;UBERON:0001048,2.50e-07,134;UBERON:0005153,8.13e-07,17;UBERON:0005178,8.13e-07,17;UBERON:0005181,8.13e-07,17;UBERON:0002224,8.13e-07,17;UBERON:0000915,8.13e-07,17;UBERON:0008947,8.13e-07,17;UBERON:0003258,8.13e-07,17|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54355661621568,0.286533439938757,4.12537673821954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0.86759614151947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.9619792922928,33.5372265772968,36.012412292203,45.2182444967752,57.6519199019893,64.3293860740367,68.3649797566199,68.9462641597021,77.2986566470662,88.5331992534525,105.888014331016,94.9315759781971,116.667589965415,100.773502918592,90.7235390820113,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0.407302655690628,0,0,0,0,0,0,0,0.83422552858047,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.554259570499814,1.70542270593436,0.651859905768103,0.678980343100753,0,1.34005005953453,0.952174563544055,0.585400943573396,1.57635144106191,0.664394068946325,1.43509291791738,1.47476983244164,1.38147985492716,1.59113964439663,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0.790575555893047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0.168956125490778,0.117357238645754,0,0,0,0,0,0,0,0.51968329191118,0.179026695667481,0.39736270956253,0.120195449519969,0.147689527174577,0.201932899896295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0,0,0.209613162627982,0,0.666740183404846,0.412070114477788,0.320919209591815,1.01078884705519,0,1.50901073108861,0.468207537349412,0.384150914429216,0.804096565378586,0.476293691283074,0.579421629724277,1.35036454324594,0.412085900803307,0.735994600671987,1.02860775715625,0.532427418478012,0.715308569841963,1.16277133305863,0.658765662907314,0.592302255241736,1.09756783723664,0.526139422875686,0.814824683075171,1.12228454331548,0.474540072496697,0.788035859004508,0.409231043169689,0.929621047115796,0.771626443924566,0,0.935726433781634,1.07435527024149,0,0,0.231867835620421|short_description=p1@Tnni3k}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=435766 | |||
|HGNC= | |||
|MCL_coexpression_id=19 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000146952_5end | |||
|cluster_id=chr3:154718305..154718334,- | |||
|description=CAGE_peak_1_at_Tnni3k_5end | |||
|id=chr3:154718305..154718334,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!2.18e-22!18;UBERON:0000948!2.18e-22!18;UBERON:0005498!2.18e-22!18;UBERON:0004140!2.18e-22!18;UBERON:0009881!2.18e-22!18;UBERON:0004141!2.18e-22!18;UBERON:0003084!2.18e-22!18;UBERON:0007005!2.18e-22!18;UBERON:0004139!2.18e-22!18;UBERON:0004291!2.18e-22!18;UBERON:0004535!5.45e-18!23;UBERON:0001009!5.45e-18!23;UBERON:0002048!4.24e-12!14;UBERON:0000117!4.24e-12!14;UBERON:0000171!4.24e-12!14;UBERON:0000170!4.24e-12!14;UBERON:0005597!4.24e-12!14;UBERON:0000118!4.24e-12!14;UBERON:0004872!1.65e-10!33;UBERON:0005153!2.79e-09!17;UBERON:0005178!2.79e-09!17;UBERON:0005181!2.79e-09!17;UBERON:0002224!2.79e-09!17;UBERON:0000915!2.79e-09!17;UBERON:0008947!2.79e-09!17;UBERON:0003258!2.79e-09!17;UBERON:0003914!4.52e-07!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.43e-44,18;UBERON:0000948,1.43e-44,18;UBERON:0005498,1.43e-44,18;UBERON:0004140,1.43e-44,18;UBERON:0009881,1.43e-44,18;UBERON:0004141,1.43e-44,18;UBERON:0003084,1.43e-44,18;UBERON:0007005,1.43e-44,18;UBERON:0004139,1.43e-44,18;UBERON:0004291,1.43e-44,18;UBERON:0004535,5.01e-34,23;UBERON:0001009,5.01e-34,23;UBERON:0004872,1.60e-22,33;UBERON:0003103,2.28e-16,43;UBERON:0003914,1.21e-14,47;UBERON:0000025,1.57e-09,114;UBERON:0004111,1.46e-08,122;UBERON:0002048,1.79e-08,14;UBERON:0000117,1.79e-08,14;UBERON:0000171,1.79e-08,14;UBERON:0000170,1.79e-08,14;UBERON:0005597,1.79e-08,14;UBERON:0000118,1.79e-08,14;UBERON:0001048,2.50e-07,134;UBERON:0005153,8.13e-07,17;UBERON:0005178,8.13e-07,17;UBERON:0005181,8.13e-07,17;UBERON:0002224,8.13e-07,17;UBERON:0000915,8.13e-07,17;UBERON:0008947,8.13e-07,17;UBERON:0003258,8.13e-07,17 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54355661621568,0.286533439938757,4.12537673821954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0.86759614151947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.9619792922928,33.5372265772968,36.012412292203,45.2182444967752,57.6519199019893,64.3293860740367,68.3649797566199,68.9462641597021,77.2986566470662,88.5331992534525,105.888014331016,94.9315759781971,116.667589965415,100.773502918592,90.7235390820113,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0.407302655690628,0,0,0,0,0,0,0,0.83422552858047,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.554259570499814,1.70542270593436,0.651859905768103,0.678980343100753,0,1.34005005953453,0.952174563544055,0.585400943573396,1.57635144106191,0.664394068946325,1.43509291791738,1.47476983244164,1.38147985492716,1.59113964439663,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0.790575555893047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0.168956125490778,0.117357238645754,0,0,0,0,0,0,0,0.51968329191118,0.179026695667481,0.39736270956253,0.120195449519969,0.147689527174577,0.201932899896295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0,0,0.209613162627982,0,0.666740183404846,0.412070114477788,0.320919209591815,1.01078884705519,0,1.50901073108861,0.468207537349412,0.384150914429216,0.804096565378586,0.476293691283074,0.579421629724277,1.35036454324594,0.412085900803307,0.735994600671987,1.02860775715625,0.532427418478012,0.715308569841963,1.16277133305863,0.658765662907314,0.592302255241736,1.09756783723664,0.526139422875686,0.814824683075171,1.12228454331548,0.474540072496697,0.788035859004508,0.409231043169689,0.929621047115796,0.771626443924566,0,0.935726433781634,1.07435527024149,0,0,0.231867835620421 | |||
|short_description=p1@Tnni3k | |||
}} |
Latest revision as of 20:20, 1 October 2015
Short description: | p1@Tnni3k |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tnni3k_5end |
Coexpression cluster: | MCL_coexpression_mm9:19 |
Association with transcript: | 0bp_to_ENSMUST00000146952_5end |
EntrezGene: | Tnni3k |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.43e-44 | 18 |
heart | 1.43e-44 | 18 |
primitive heart tube | 1.43e-44 | 18 |
primary heart field | 1.43e-44 | 18 |
anterior lateral plate mesoderm | 1.43e-44 | 18 |
heart tube | 1.43e-44 | 18 |
heart primordium | 1.43e-44 | 18 |
cardiac mesoderm | 1.43e-44 | 18 |
cardiogenic plate | 1.43e-44 | 18 |
heart rudiment | 1.43e-44 | 18 |
cardiovascular system | 5.01e-34 | 23 |
circulatory system | 5.01e-34 | 23 |
splanchnic layer of lateral plate mesoderm | 1.60e-22 | 33 |
compound organ | 2.28e-16 | 43 |
epithelial tube | 1.21e-14 | 47 |
tube | 1.57e-09 | 114 |
anatomical conduit | 1.46e-08 | 122 |
lung | 1.79e-08 | 14 |
respiratory tube | 1.79e-08 | 14 |
respiration organ | 1.79e-08 | 14 |
pair of lungs | 1.79e-08 | 14 |
lung primordium | 1.79e-08 | 14 |
lung bud | 1.79e-08 | 14 |
primordium | 2.50e-07 | 134 |
epithelial bud | 8.13e-07 | 17 |
thoracic cavity element | 8.13e-07 | 17 |
thoracic segment organ | 8.13e-07 | 17 |
thoracic cavity | 8.13e-07 | 17 |
thoracic segment of trunk | 8.13e-07 | 17 |
respiratory primordium | 8.13e-07 | 17 |
endoderm of foregut | 8.13e-07 | 17 |