FFCP PHASE1:Mm9::chr10:74779821..74779869,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:74779821..74779869,+
|short_description=p1@Adora2a
|description=CAGE_peak_1_at_Adora2a_5end
|association_with_transcript=133bp_to_ENSMUST00000105420,NM_00...") |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=11540 | |EntrezGene=11540 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q60613,Q8CAU3 | |UniProt=Q60613,Q8CAU3 | ||
|association_with_transcript=133bp_to_ENSMUST00000105420,NM_009630,uc007fqh.1_5end | |||
|cluster_id=chr10:74779821..74779869,+ | |||
|description=CAGE_peak_1_at_Adora2a_5end | |||
|id=chr10:74779821..74779869,+ | |||
|ontology_enrichment_celltype=CL:0000791!5.06e-07!9;CL:0000789!5.06e-07!9;CL:0002420!5.06e-07!9;CL:0002419!5.06e-07!9;CL:0000790!5.06e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.63e-07,9;CL:0000789,2.63e-07,9;CL:0002420,2.63e-07,9;CL:0002419,2.63e-07,9;CL:0000790,2.63e-07,9;CL:0000624,7.86e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.47e-10!29;UBERON:0000065!3.53e-10!41;UBERON:0003081!4.25e-10!88;UBERON:0002370!8.04e-10!23;UBERON:0000974!8.04e-10!23;UBERON:0004807!8.04e-10!23;UBERON:0005058!8.04e-10!23;UBERON:0003351!8.04e-10!23;UBERON:0009113!8.04e-10!23;UBERON:0003295!8.04e-10!23;UBERON:0009722!8.04e-10!23;UBERON:0005562!8.04e-10!23;UBERON:0007690!8.04e-10!23;UBERON:0001004!1.38e-09!42;UBERON:0006562!4.84e-09!24;UBERON:0001557!4.84e-09!24;UBERON:0001042!4.84e-09!24;UBERON:0008814!4.84e-09!24;UBERON:0009145!4.84e-09!24;UBERON:0003408!5.47e-09!24;UBERON:0002390!7.24e-09!45;UBERON:0003061!7.24e-09!45;UBERON:0002193!1.00e-08!48;UBERON:0005057!7.00e-08!51;UBERON:0002405!1.51e-07!70;UBERON:0002368!1.83e-07!60;UBERON:0005911!4.22e-07!69;UBERON:0000926!8.87e-07!193;UBERON:0004120!8.87e-07!193;UBERON:0006603!8.87e-07!193;UBERON:0000477!9.81e-07!154;UBERON:0000949!9.83e-07!72 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000065,1.08e-11,41;UBERON:0004177,1.39e-11,29;UBERON:0005057,1.39e-11,29;UBERON:0001004,5.93e-11,42;UBERON:0002370,7.58e-11,23;UBERON:0000974,7.58e-11,23;UBERON:0004807,7.58e-11,23;UBERON:0005058,7.58e-11,23;UBERON:0003351,7.58e-11,23;UBERON:0009113,7.58e-11,23;UBERON:0003295,7.58e-11,23;UBERON:0009722,7.58e-11,23;UBERON:0005562,7.58e-11,23;UBERON:0007690,7.58e-11,23;UBERON:0006562,7.61e-10,24;UBERON:0003408,7.61e-10,24;UBERON:0001557,7.61e-10,24;UBERON:0001042,7.61e-10,24;UBERON:0008814,7.61e-10,24;UBERON:0009145,7.61e-10,24;UBERON:0003081,1.77e-09,87;UBERON:0000077,4.96e-09,35;UBERON:0002390,6.75e-09,45;UBERON:0003061,6.75e-09,45;UBERON:0002193,1.06e-08,48;UBERON:0002405,1.06e-08,48;UBERON:0002368,2.48e-08,60;UBERON:0005911,3.42e-08,69;UBERON:0001041,1.22e-07,80;UBERON:0000072,2.20e-07,27;UBERON:0000949,2.39e-07,72;UBERON:0002530,4.23e-07,65 | |||
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| ||
|short_description=p1@Adora2a | |||
}} | }} |
Latest revision as of 06:53, 26 September 2015
Short description: | p1@Adora2a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Adora2a_5end |
Coexpression cluster: | NA |
Association with transcript: | 133bp_to_ENSMUST00000105420, NM_009630, uc007fqh.1_5end |
EntrezGene: | Adora2a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.63e-07 | 9 |
alpha-beta T cell | 2.63e-07 | 9 |
immature T cell | 2.63e-07 | 9 |
mature T cell | 2.63e-07 | 9 |
immature alpha-beta T cell | 2.63e-07 | 9 |
CD4-positive, alpha-beta T cell | 7.86e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
respiratory tract | 1.08e-11 | 41 |
hemopoietic organ | 1.39e-11 | 29 |
immune organ | 1.39e-11 | 29 |
respiratory system | 5.93e-11 | 42 |
thymus | 7.58e-11 | 23 |
neck | 7.58e-11 | 23 |
respiratory system epithelium | 7.58e-11 | 23 |
hemolymphoid system gland | 7.58e-11 | 23 |
pharyngeal epithelium | 7.58e-11 | 23 |
thymic region | 7.58e-11 | 23 |
pharyngeal gland | 7.58e-11 | 23 |
entire pharyngeal arch endoderm | 7.58e-11 | 23 |
thymus primordium | 7.58e-11 | 23 |
early pharyngeal endoderm | 7.58e-11 | 23 |
pharynx | 7.61e-10 | 24 |
gland of gut | 7.61e-10 | 24 |
upper respiratory tract | 7.61e-10 | 24 |
chordate pharynx | 7.61e-10 | 24 |
pharyngeal arch system | 7.61e-10 | 24 |
pharyngeal region of foregut | 7.61e-10 | 24 |
lateral plate mesoderm | 1.77e-09 | 87 |
mixed endoderm/mesoderm-derived structure | 4.96e-09 | 35 |
hematopoietic system | 6.75e-09 | 45 |
blood island | 6.75e-09 | 45 |
hemolymphoid system | 1.06e-08 | 48 |
immune system | 1.06e-08 | 48 |
endocrine gland | 2.48e-08 | 60 |
endo-epithelium | 3.42e-08 | 69 |
foregut | 1.22e-07 | 80 |
segment of respiratory tract | 2.20e-07 | 27 |
endocrine system | 2.39e-07 | 72 |
gland | 4.23e-07 | 65 |