FFCP PHASE1:Hg19::chr8:9764421..9764432,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr8:9764421..9764432,+ | |||
|coexpression_cluster_id=C2542 | |||
|description=CAGE_peak_at_chr8:9764421..9764432,+ | |||
|id=chr8:9764421..9764432,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;7.01e-08;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.99e-45;3!UBERON:0003056;2.31e-12;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;8.97e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,8.48e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0001049!4.32e-50!57;UBERON:0005068!4.32e-50!57;UBERON:0006241!4.32e-50!57;UBERON:0007135!4.32e-50!57;UBERON:0005743!1.99e-48!86;UBERON:0002616!3.28e-48!59;UBERON:0001017!1.28e-47!82;UBERON:0000955!1.65e-46!69;UBERON:0006238!1.65e-46!69;UBERON:0000073!2.24e-46!94;UBERON:0001016!2.24e-46!94;UBERON:0002020!2.58e-41!34;UBERON:0003528!2.58e-41!34;UBERON:0003075!8.05e-40!86;UBERON:0007284!8.05e-40!86;UBERON:0001869!2.84e-39!32;UBERON:0002791!5.41e-38!33;UBERON:0002346!9.10e-38!90;UBERON:0002780!1.98e-37!41;UBERON:0001890!1.98e-37!41;UBERON:0006240!1.98e-37!41;UBERON:0001893!8.70e-37!34;UBERON:0003080!1.90e-36!42;UBERON:0002619!3.95e-35!22;UBERON:0001950!2.80e-33!20;UBERON:0000956!1.03e-30!25;UBERON:0000203!1.03e-30!25;UBERON:0003056!1.25e-29!61;UBERON:0000033!1.51e-25!123;UBERON:0000153!4.61e-24!129;UBERON:0007811!4.61e-24!129;UBERON:0004121!6.99e-23!169;UBERON:0000924!3.43e-22!173;UBERON:0006601!3.43e-22!173;UBERON:0007023!5.24e-22!115;UBERON:0001871!7.40e-20!7;UBERON:0004733!3.71e-18!12;UBERON:0002028!3.71e-18!12;UBERON:0007277!3.71e-18!12;UBERON:0002420!5.43e-17!9;UBERON:0007245!5.43e-17!9;UBERON:0010009!5.43e-17!9;UBERON:0010011!5.43e-17!9;UBERON:0000454!5.43e-17!9;UBERON:0004732!1.10e-16!13;UBERON:0000349!1.53e-14!5;UBERON:0003076!2.49e-14!15;UBERON:0003057!2.49e-14!15;UBERON:0002771!5.85e-14!3;UBERON:0002680!6.17e-13!9;UBERON:0001895!6.17e-13!9;UBERON:0010092!6.17e-13!9;UBERON:0000200!5.83e-12!6;UBERON:0002308!6.83e-12!9;UBERON:0000125!6.83e-12!9;UBERON:0000025!1.29e-11!194;UBERON:0001876!3.21e-10!2;UBERON:0000369!3.88e-10!4;UBERON:0002435!3.88e-10!4;UBERON:0000204!3.88e-10!4;UBERON:0010082!3.88e-10!4;UBERON:0009663!5.99e-10!7;UBERON:0000064!1.10e-09!219;UBERON:0002298!2.87e-09!8;UBERON:0002021!8.54e-09!5;UBERON:0001872!1.31e-08!5;UBERON:0004111!3.66e-08!241;UBERON:0002037!8.74e-08!6;UBERON:0006215!8.74e-08!6;UBERON:0000483!4.59e-07!309;UBERON:0000988!5.31e-07!3;UBERON:0001896!5.64e-07!3;UBERON:0005290!5.64e-07!3;UBERON:0010096!5.64e-07!3;UBERON:0000119!6.20e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;3.88e-23;6!UBERON:0002680;8.39e-16;9!UBERON:0001895;8.39e-16;9!UBERON:0004733;4.07e-12;12!UBERON:0002028;4.07e-12;12!UBERON:0004732;2.90e-11;13!UBERON:0000966;6.13e-08;5!UBERON:0005388;6.13e-08;5!UBERON:0001802;6.13e-08;5!UBERON:0001016;6.27e-08;83!UBERON:0001872;7.01e-08;5!UBERON:0000013;7.01e-08;5!UBERON:0002410;7.01e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,3.88e-23,6;UBERON:0006215,3.88e-23,6;UBERON:0002680,8.39e-16,9;UBERON:0001895,8.39e-16,9;UBERON:0010092,8.39e-16,9;UBERON:0004733,4.07e-12,12;UBERON:0002028,4.07e-12,12;UBERON:0007277,4.07e-12,12;UBERON:0004732,2.90e-11,13;UBERON:0003076,6.78e-10,15;UBERON:0003057,6.78e-10,15;UBERON:0001016,1.94e-09,89;UBERON:0000955,4.00e-08,68;UBERON:0006238,4.00e-08,68;UBERON:0000013,6.55e-08,5;UBERON:0002410,6.55e-08,5;UBERON:0001872,7.49e-08,5;UBERON:0001017,6.33e-07,81;UBERON:0003075,6.33e-07,82;UBERON:0007284,6.33e-07,82;UBERON:0000966,8.02e-07,6;UBERON:0005388,8.02e-07,6;UBERON:0001802,8.02e-07,6 | |||
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|short_description=p@chr8:9764421..9764432,+ | |||
}} |
Latest revision as of 20:47, 31 July 2015
Short description: | p@chr8:9764421..9764432, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:9764421..9764432, + |
Coexpression cluster: | C2542_cerebellum_neuroblastoma_retinoblastoma_pineal_parietal_medulloblastoma_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 3.88e-23 | 6 |
rhombic lip | 3.88e-23 | 6 |
regional part of metencephalon | 8.39e-16 | 9 |
metencephalon | 8.39e-16 | 9 |
future metencephalon | 8.39e-16 | 9 |
segmental subdivision of hindbrain | 4.07e-12 | 12 |
hindbrain | 4.07e-12 | 12 |
presumptive hindbrain | 4.07e-12 | 12 |
segmental subdivision of nervous system | 2.90e-11 | 13 |
posterior neural tube | 6.78e-10 | 15 |
chordal neural plate | 6.78e-10 | 15 |
nervous system | 1.94e-09 | 89 |
brain | 4.00e-08 | 68 |
future brain | 4.00e-08 | 68 |
sympathetic nervous system | 6.55e-08 | 5 |
autonomic nervous system | 6.55e-08 | 5 |
parietal lobe | 7.49e-08 | 5 |
central nervous system | 6.33e-07 | 81 |
neural plate | 6.33e-07 | 82 |
presumptive neural plate | 6.33e-07 | 82 |
retina | 8.02e-07 | 6 |
photoreceptor array | 8.02e-07 | 6 |
posterior segment of eyeball | 8.02e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 8.48e-07 | 6 |