FFCP PHASE1:Hg19::chr9:21975146..21975164,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1029 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1787 | |||
|TSSclassifier=strong | |||
|UniProt=P42771,A5X2G7 | |||
|association_with_transcript=-14bp_to_NM_000077,NM_001195132_5end | |||
|cluster_id=chr9:21975146..21975164,- | |||
|coexpression_cluster_id=C1550 | |||
|description=CAGE_peak_5_at_CDKN2A_5end | |||
|id=chr9:21975146..21975164,- | |||
|ontology_enrichment_celltype=CL:0000359!1.24e-17!32;CL:0000192!2.24e-13!42;CL:0000514!2.24e-13!42;CL:0000548!3.54e-13!679;CL:0000004!3.54e-13!679;CL:0000255!3.54e-13!679;CL:0000012!1.20e-12!682;CL:0000066!3.39e-12!254;CL:0000220!6.06e-10!246;CL:0000680!1.23e-09!57;CL:0000056!1.23e-09!57;CL:0000355!1.23e-09!57;CL:0002321!1.46e-09!248;CL:0000003!1.51e-09!722;CL:0000183!1.96e-09!59;CL:0000187!7.50e-09!54;CL:0000055!7.84e-08!180;CL:0002539!4.30e-07!10;CL:0000393!6.00e-07!60;CL:0000211!6.00e-07!60;CL:0002371!7.18e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0000359;9.36e-21;32!CL:0000192;1.60e-12;43!CL:0002539;6.34e-09;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,3.57e-22,32;CL:0000192,8.26e-17,43;CL:0000514,8.26e-17,43;CL:0000066,5.09e-15,253;CL:0000680,3.72e-12,58;CL:0000056,3.72e-12,58;CL:0000355,3.72e-12,58;CL:0000187,1.28e-11,55;CL:0002321,1.42e-10,250;CL:0000393,2.07e-09,61;CL:0000211,2.07e-09,61;CL:0002539,4.36e-09,10;CL:0000222,9.27e-08,121 | |||
|ontology_enrichment_development_v019=CL:0000514;1.60e-12;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!8.62e-18!42;UBERON:0003509!8.62e-18!42;UBERON:0004572!8.62e-18!42;UBERON:0002049!2.28e-15!79;UBERON:0007798!2.28e-15!79;UBERON:0001981!8.09e-15!60;UBERON:0007500!8.09e-15!60;UBERON:0004537!8.09e-15!60;UBERON:0006965!8.09e-15!60;UBERON:0004573!2.13e-14!33;UBERON:0004571!2.13e-14!33;UBERON:0000055!4.13e-14!69;UBERON:0000486!4.06e-12!82;UBERON:0000914!7.73e-12!83;UBERON:0002329!7.73e-12!83;UBERON:0003077!7.73e-12!83;UBERON:0003059!7.73e-12!83;UBERON:0007282!7.73e-12!83;UBERON:0009618!7.73e-12!83;UBERON:0007285!7.73e-12!83;UBERON:0004872!2.19e-11!84;UBERON:0004290!5.00e-10!70;UBERON:0003914!8.24e-10!118;UBERON:0002100!1.38e-09!216;UBERON:0005256!4.92e-09!143;UBERON:0003104!6.35e-09!238;UBERON:0009142!6.35e-09!238;UBERON:0004535!1.02e-08!110;UBERON:0001134!2.30e-08!61;UBERON:0002036!2.30e-08!61;UBERON:0003082!2.30e-08!61;UBERON:0001009!2.77e-08!113;UBERON:0000947!3.21e-08!21;UBERON:0010191!3.21e-08!21;UBERON:0001737!1.22e-07!9;UBERON:0002385!1.23e-07!63;UBERON:0001015!1.23e-07!63;UBERON:0000383!1.23e-07!63;UBERON:0004237!4.30e-07!10;UBERON:0004695!4.30e-07!10;UBERON:0002111!4.30e-07!10;UBERON:0004178!4.30e-07!10;UBERON:0000926!7.51e-07!448;UBERON:0004120!7.51e-07!448;UBERON:0006603!7.51e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.57e-13;33!UBERON:0004571;5.57e-13;33!UBERON:0001637;2.95e-12;42!UBERON:0003509;2.95e-12;42!UBERON:0004572;2.95e-12;42!UBERON:0001737;8.65e-10;9!UBERON:0001557;8.65e-10;9!UBERON:0007500;5.97e-09;56!UBERON:0001981;5.97e-09;56!UBERON:0004537;5.97e-09;56!UBERON:0004237;6.34e-09;10!UBERON:0004695;6.34e-09;10!UBERON:0002111;6.34e-09;10!UBERON:0004178;6.34e-09;10!UBERON:0010371;4.98e-08;31!UBERON:0003914;8.59e-08;74!UBERON:0000947;9.37e-08;21!UBERON:0010191;9.37e-08;21!UBERON:0000072;1.09e-07;37!UBERON:0000065;1.30e-07;44!UBERON:0002049;8.10e-07;75!UBERON:0007798;8.10e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,9.35e-18,42;UBERON:0003509,9.35e-18,42;UBERON:0004572,9.35e-18,42;UBERON:0000486,4.30e-16,83;UBERON:0004573,6.03e-15,33;UBERON:0004571,6.03e-15,33;UBERON:0007500,2.11e-14,59;UBERON:0001981,2.11e-14,59;UBERON:0004537,2.11e-14,59;UBERON:0006965,2.11e-14,59;UBERON:0007503,7.09e-14,78;UBERON:0002049,7.56e-14,78;UBERON:0007798,7.56e-14,78;UBERON:0000055,5.67e-13,68;UBERON:0007524,7.52e-13,73;UBERON:0002329,9.02e-13,71;UBERON:0003059,9.02e-13,71;UBERON:0007282,9.02e-13,71;UBERON:0004290,9.02e-13,71;UBERON:0009618,9.02e-13,71;UBERON:0003077,2.10e-12,72;UBERON:0007285,2.10e-12,72;UBERON:0001134,1.27e-10,62;UBERON:0002036,1.27e-10,62;UBERON:0003082,1.27e-10,62;UBERON:0002385,6.13e-10,64;UBERON:0001015,6.13e-10,64;UBERON:0000383,6.13e-10,64;UBERON:0001737,7.95e-10,9;UBERON:0003104,2.84e-09,160;UBERON:0009142,2.84e-09,160;UBERON:0002100,3.96e-09,199;UBERON:0004237,4.36e-09,10;UBERON:0004695,4.36e-09,10;UBERON:0002111,4.36e-09,10;UBERON:0004178,4.36e-09,10;UBERON:0005256,8.77e-09,122;UBERON:0004872,9.19e-09,83;UBERON:0003914,2.23e-08,117;UBERON:0000490,2.30e-08,148;UBERON:0000947,6.18e-08,21;UBERON:0010191,6.18e-08,21;UBERON:0000483,2.25e-07,306;UBERON:0004535,2.81e-07,109;UBERON:0000119,4.60e-07,309;UBERON:0001009,9.49e-07,112 | |||
|phase1_expression=1.81678379270557,0.214100523890983,0.845726424575827,2.00146596706261,4.91657203870017,0.872338524100369,0,6.31719873426831,0.783556884599516,0,0,1.31064823278103,5.27533956456907,0.866364470720326,2.65117900582333,5.3786011716142,6.02694528023977,8.03341099426111,3.90346239032406,0.123121058076788,0.612002073732759,0.626909442956176,0,0.273748850145768,0,0,0,0,0,0,0,0,2.71085326900425,4.06729411183466,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0.128091319725675,0.260118695119756,0.328875809207352,0.276350017785848,0.289803085735052,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,1.5905718941022,0.486634870302636,0.850813354476611,3.32594096193846,1.40535657109002,0,1.09288586487763,0.370784442784429,0,0.348259474598534,0,0,0,0,0.198762407366705,2.58070378531837,1.04142150482278,1.69592382577203,2.09749718104953,1.10047216776027,0.835979866147242,1.03366703667732,0.35576626268671,0.33472061276467,4.02829317109147,1.52054421143703,2.4406205754817,0.367663080345869,4.86085168729056,0,0,0,0,0.949265659568129,0.732806975721629,0,0,3.48875241714027,2.48485975847659,1.51956613997496,4.63432132846266,0.860509862246441,0.354668382198357,0.560677600142307,0,11.5933747756065,0,0.67355336034844,0.163461903113459,0.605429710579726,0,0,9.67696238173994,3.4228309292667,8.51857479145266,0.23486899728753,0,0,1.42907919878425,0,1.13658359293342,0,0.247266929278557,0,3.59309070908119,0,0,0.831192346452549,0.877955241761676,1.22595118319608,0.150238058906597,0.453728732640084,0.179389635688862,0.640672166455702,1.05965950579781,0.300091096084402,0.618315175430633,1.28820270022815,0.558350568994769,0.337552664482532,0,0,0.644349290496095,0.484938170456436,0,0.503760491138201,0,3.47869535693934,1.90922284413584,7.4569194801141,0,0,0,0,0,0,1.56449532329816,4.5026865673502,4.14404764057442,5.57241513638375,6.49691533502627,7.45332840251016,7.41772636343647,5.78426471720357,8.60292987312673,7.1900216550494,3.79632990577755,5.12358971008625,8.04508007013919,6.92544882503503,0,1.40241773803446,0,0,0,0,0,0,0,5.49016992955282,5.70701484124853,0,0,1.20364978706088,0,2.07986957055916,4.3299402607582,0.34779121492523,6.80970426567766,0.144366447761074,1.38895653772983,0,0,0,0,0.702012795417713,0.297262324577456,4.68669169933885,3.02367830757947,3.26082723657489,0,0,0.383382679165211,0,1.84901711427775,0.207328115540772,0.144119953416961,0.25248486685276,0,1.52795370223311,1.17217447210047,1.71072446022705,0,1.50171528921959,0.285826432630578,0,0,0,8.27338980849778,3.57656445851882,0.845302752556,1.59562869950922,1.04007436911366,0,1.41849132023278,2.39779961114489,0,0,1.64648067356154,0,0,0,8.13886318060882,16.5591357134056,4.39881161201051,0,0,0,4.79249710983165,2.29723871668228,4.27910715122155,2.17171960001369,3.6985738059069,0.358121926479791,0,0,0,0,1.01637849688985,0,0,0,0,0,0,0,0,1.50051156317903,3.52644530809656,0.207970861530807,1.24900292158013,0.473107245101804,0,8.42649079237613,22.7407504055985,3.10419213877515,0,0.553107505625109,0.347534457872331,0,0.343143423810856,0,0,0,0,1.66435439510497,0.30239029332968,1.24053903909388,0,0.561320188866147,1.40953064181271,0.511707249066704,3.05622450172854,2.96836132889982,0,0.355123450626254,0.657017248110473,2.59627214591811,0.232420756919918,0,14.4364658618365,0.828728900423067,0,0.364182336013434,2.88473712910733,0.451199612907412,0.385076685522074,1.56869953835371,4.38417673959782,5.59423633132241,1.13733384070897,1.36074964221213,1.29549549661284,0,2.43851793789468,3.51182841698397,0.254876273045038,0,2.91037181138832,0,0,0,2.95213181129735,1.62689197332152,0.103041011647722,5.4941678891006,5.19809849499704,4.01985876597321,4.55042172225565,0,0.193341436584244,0,0,0,0,0,0,0,5.78497203763423,3.84380134730212,1.02090169995667,2.023155617111,8.83206543664843,3.1481234683064,1.3940745403212,5.85263802334569,7.98459045475533,1.73986598415015,7.78361720236464,5.58187058293766,1.116475108079,1.58189712359363,1.33441135746677,2.04718233049067,1.28381696410176,0.95460974377781,3.92474320099615,0,0,0,4.44801459461295,17.4361353290309,2.10629228119491,0,5.11798328225697,4.22600587027022,0.545999645631943,3.11091950298168,1.13008116620243,1.65409603063837,4.64407282668854,8.76901770507525,0.578775534266688,0,6.69604243976923,6.196469961995,4.7888252430481,1.86434757865267,4.51945588660357,6.4200789266625,0,0,0,0,0,1.05844323998063,4.02181365321472,4.3556393944529,0.282431402330337,4.3050537267123,0,2.21715076768338,3.21612760289743,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,2.75175657541048,0.324621940274555,0.280797178113459,0,0.47003968731907,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,11.278960407028,0,0.146508179271894,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0.276283915531148,4.28285671352269,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262379999988587,0,1.706901724282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| |||
|short_description=p5@CDKN2A | |||
}} |
Latest revision as of 23:16, 16 September 2015
Short description: | p5@CDKN2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CDKN2A_5end |
Coexpression cluster: | C1550_Osteoblast_Mesothelial_acute_leukemia_Prostate_Fibroblast_Lens |
Association with transcript: | -14bp_to_NM_000077, NM_001195132_5end |
EntrezGene: | CDKN2A |
HGNC: | 1787 |
UniProt: | P42771A5X2G7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 3.57e-22 | 32 |
smooth muscle cell | 8.26e-17 | 43 |
smooth muscle myoblast | 8.26e-17 | 43 |
epithelial cell | 5.09e-15 | 253 |
muscle precursor cell | 3.72e-12 | 58 |
myoblast | 3.72e-12 | 58 |
multi-potent skeletal muscle stem cell | 3.72e-12 | 58 |
muscle cell | 1.28e-11 | 55 |
embryonic cell | 1.42e-10 | 250 |
electrically responsive cell | 2.07e-09 | 61 |
electrically active cell | 2.07e-09 | 61 |
aortic smooth muscle cell | 4.36e-09 | 10 |
mesodermal cell | 9.27e-08 | 121 |