FFCP PHASE1:Mm9::chr11:69393894..69393921,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:69393894..69393921,+
|short_description=p1@Trp53
|description=CAGE_peak_1_at_Trp53_5end
|association_with_transcript=0bp_to_ENSMUST00000108657,ENSMUST0000...") |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=22059 | |EntrezGene=22059 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000108657,ENSMUST00000147512_5end | |||
|cluster_id=chr11:69393894..69393921,+ | |||
|description=CAGE_peak_1_at_Trp53_5end | |||
|id=chr11:69393894..69393921,+ | |||
|ontology_enrichment_celltype=CL:0000988!2.75e-12!32;CL:0002032!2.75e-12!32;CL:0000037!2.75e-12!32;CL:0000566!2.75e-12!32;CL:0000837!2.75e-12!32;CL:0002320!3.05e-09!46;CL:0000134!3.05e-09!46;CL:0002031!4.49e-09!25;CL:0000542!1.14e-08!13;CL:0000051!1.14e-08!13;CL:0000219!1.92e-08!54;CL:0000838!3.44e-08!12;CL:0000738!1.02e-07!17;CL:0002087!1.02e-07!17;CL:0000084!1.07e-07!11;CL:0000827!1.07e-07!11;CL:0000063!3.59e-07!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.75e-12,32;CL:0002032,2.75e-12,32;CL:0000037,2.75e-12,32;CL:0000837,2.75e-12,32;CL:0002320,3.05e-09,46;CL:0000134,3.05e-09,46;CL:0002031,4.49e-09,25;CL:0000542,1.14e-08,13;CL:0000051,1.14e-08,13;CL:0000219,1.92e-08,54;CL:0000838,3.44e-08,12;CL:0000738,1.02e-07,17;CL:0002087,1.02e-07,17;CL:0000084,1.07e-07,11;CL:0000827,1.07e-07,11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!7.69e-14!48;UBERON:0002390!4.04e-13!45;UBERON:0003061!4.04e-13!45;UBERON:0004177!4.90e-10!29;UBERON:0002384!3.05e-09!46;UBERON:0000072!1.05e-08!27;UBERON:0003081!1.52e-08!88;UBERON:0002405!2.41e-08!70;UBERON:0002370!4.98e-08!23;UBERON:0000974!4.98e-08!23;UBERON:0004807!4.98e-08!23;UBERON:0005058!4.98e-08!23;UBERON:0003351!4.98e-08!23;UBERON:0009113!4.98e-08!23;UBERON:0003295!4.98e-08!23;UBERON:0009722!4.98e-08!23;UBERON:0005562!4.98e-08!23;UBERON:0007690!4.98e-08!23;UBERON:0006562!1.94e-07!24;UBERON:0001557!1.94e-07!24;UBERON:0001042!1.94e-07!24;UBERON:0008814!1.94e-07!24;UBERON:0009145!1.94e-07!24;UBERON:0000065!1.97e-07!41;UBERON:0003408!3.66e-07!24;UBERON:0001004!7.59e-07!42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,7.69e-14,48;UBERON:0002405,7.69e-14,48;UBERON:0002390,4.04e-13,45;UBERON:0003061,4.04e-13,45;UBERON:0004177,4.90e-10,29;UBERON:0005057,4.90e-10,29;UBERON:0002384,3.05e-09,46;UBERON:0000072,1.05e-08,27;UBERON:0003081,4.35e-08,87;UBERON:0002370,4.98e-08,23;UBERON:0000974,4.98e-08,23;UBERON:0004807,4.98e-08,23;UBERON:0005058,4.98e-08,23;UBERON:0003351,4.98e-08,23;UBERON:0009113,4.98e-08,23;UBERON:0003295,4.98e-08,23;UBERON:0009722,4.98e-08,23;UBERON:0005562,4.98e-08,23;UBERON:0007690,4.98e-08,23;UBERON:0006562,1.94e-07,24;UBERON:0001557,1.94e-07,24;UBERON:0001042,1.94e-07,24;UBERON:0008814,1.94e-07,24;UBERON:0009145,1.94e-07,24;UBERON:0000065,1.97e-07,41;UBERON:0000926,3.61e-07,120;UBERON:0004120,3.61e-07,120;UBERON:0006603,3.61e-07,120;UBERON:0003408,3.66e-07,24;UBERON:0000077,3.73e-07,35;UBERON:0001004,7.59e-07,42 | |||
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| ||
|short_description=p1@Trp53 | |||
}} | }} |
Latest revision as of 00:22, 2 October 2015
Short description: | p1@Trp53 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Trp53_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000108657, ENSMUST00000147512_5end |
EntrezGene: | Trp53 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.75e-12 | 32 |
hematopoietic oligopotent progenitor cell | 2.75e-12 | 32 |
hematopoietic stem cell | 2.75e-12 | 32 |
hematopoietic multipotent progenitor cell | 2.75e-12 | 32 |
connective tissue cell | 3.05e-09 | 46 |
mesenchymal cell | 3.05e-09 | 46 |
hematopoietic lineage restricted progenitor cell | 4.49e-09 | 25 |
lymphocyte | 1.14e-08 | 13 |
common lymphoid progenitor | 1.14e-08 | 13 |
motile cell | 1.92e-08 | 54 |
lymphoid lineage restricted progenitor cell | 3.44e-08 | 12 |
leukocyte | 1.02e-07 | 17 |
nongranular leukocyte | 1.02e-07 | 17 |
T cell | 1.07e-07 | 11 |
pro-T cell | 1.07e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 7.69e-14 | 48 |
immune system | 7.69e-14 | 48 |
hematopoietic system | 4.04e-13 | 45 |
blood island | 4.04e-13 | 45 |
hemopoietic organ | 4.90e-10 | 29 |
immune organ | 4.90e-10 | 29 |
connective tissue | 3.05e-09 | 46 |
segment of respiratory tract | 1.05e-08 | 27 |
lateral plate mesoderm | 4.35e-08 | 87 |
thymus | 4.98e-08 | 23 |
neck | 4.98e-08 | 23 |
respiratory system epithelium | 4.98e-08 | 23 |
hemolymphoid system gland | 4.98e-08 | 23 |
pharyngeal epithelium | 4.98e-08 | 23 |
thymic region | 4.98e-08 | 23 |
pharyngeal gland | 4.98e-08 | 23 |
entire pharyngeal arch endoderm | 4.98e-08 | 23 |
thymus primordium | 4.98e-08 | 23 |
early pharyngeal endoderm | 4.98e-08 | 23 |
pharynx | 1.94e-07 | 24 |
upper respiratory tract | 1.94e-07 | 24 |
chordate pharynx | 1.94e-07 | 24 |
pharyngeal arch system | 1.94e-07 | 24 |
pharyngeal region of foregut | 1.94e-07 | 24 |
respiratory tract | 1.97e-07 | 41 |
mesoderm | 3.61e-07 | 120 |
mesoderm-derived structure | 3.61e-07 | 120 |
presumptive mesoderm | 3.61e-07 | 120 |
gland of gut | 3.66e-07 | 24 |
mixed endoderm/mesoderm-derived structure | 3.73e-07 | 35 |
respiratory system | 7.59e-07 | 42 |