FFCP PHASE1:Hg19::chr17:75446824..75446838,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=10801 | |EntrezGene=10801 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=7323 | |HGNC=7323 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=Q9UHD8 | |UniProt=Q9UHD8 | ||
|association_with_transcript=211bp_to_ENST00000431235,NM_001113496,uc002jty.3_5end | |association_with_transcript=211bp_to_ENST00000431235,NM_001113496,uc002jty.3_5end | ||
|cluster_id=chr17:75446824..75446838,+ | |||
|coexpression_cluster_id=C368 | |coexpression_cluster_id=C368 | ||
|description=CAGE_peak_9_at_SEPT9_5end | |description=CAGE_peak_9_at_SEPT9_5end |
Latest revision as of 18:46, 17 September 2015
Short description: | p9@SEPT9 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SEPT9_5end |
Coexpression cluster: | C368_Pericytes_Fibroblast_Nucleus_Anulus_Meningeal_Mesenchymal_Smooth |
Association with transcript: | 211bp_to_ENST00000431235, NM_001113496, uc002jty.3_5end |
EntrezGene: | SEPT9 |
HGNC: | 7323 |
UniProt: | Q9UHD8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p9@SEPT9 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 2.21e-11 | 55 |
electrically responsive cell | 2.92e-11 | 61 |
electrically active cell | 2.92e-11 | 61 |
muscle precursor cell | 2.13e-10 | 58 |
myoblast | 2.13e-10 | 58 |
multi-potent skeletal muscle stem cell | 2.13e-10 | 58 |
fibroblast | 1.41e-09 | 76 |
smooth muscle cell | 7.32e-07 | 43 |
smooth muscle myoblast | 7.32e-07 | 43 |
cardiocyte | 9.80e-07 | 16 |
Showing 1 to 10 of 10 entries
Ontology term | p-value | n |
---|---|---|
cell layer | 1.83e-20 | 309 |
epithelium | 5.44e-19 | 306 |
structure with developmental contribution from neural crest | 3.09e-18 | 132 |
epithelial vesicle | 7.06e-16 | 78 |
mesenchyme | 1.46e-14 | 160 |
entire embryonic mesenchyme | 1.46e-14 | 160 |
dense mesenchyme tissue | 2.04e-14 | 73 |
paraxial mesoderm | 3.12e-14 | 72 |
presumptive paraxial mesoderm | 3.12e-14 | 72 |
neural plate | 3.55e-14 | 82 |
Showing 1 to 10 of 70 entries