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FFCP PHASE1:Mm9::chr18:21159973..21159992,+: Difference between revisions

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(Created page with "{{FFCP |id=chr18:21159973..21159992,+ |short_description=p3@Rnf138 |description=CAGE_peak_3_at_Rnf138_5end |association_with_transcript=131bp_to_ENSMUST00000052396,ENSMUST...")
 
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{{FFCP
{{FFCP
|id=chr18:21159973..21159992,+
|DHSsupport=NA
|short_description=p3@Rnf138
|DPIdataset=NA
|description=CAGE_peak_3_at_Rnf138_5end
|association_with_transcript=131bp_to_ENSMUST00000052396,ENSMUST00000072847,ENSMUST00000167653,NM_019706,NM_207623,uc008efb.1,uc008efc.1,uc012bae.1_5end
|EntrezGene=56515
|EntrezGene=56515
|HGNC=
|HGNC=
|MCL_coexpression_id=0
|TSSclassifier=NA
|UniProt=Q9CQE0,G3UWD0
|UniProt=Q9CQE0,G3UWD0
|association_with_transcript=131bp_to_ENSMUST00000052396,ENSMUST00000072847,ENSMUST00000167653,NM_019706,NM_207623,uc008efb.1,uc008efc.1,uc012bae.1_5end
|cluster_id=chr18:21159973..21159992,+
|description=CAGE_peak_3_at_Rnf138_5end
|id=chr18:21159973..21159992,+
|ontology_enrichment_celltype=CL:0000838!2.14e-09!12;CL:0000084!1.15e-08!11;CL:0000827!1.15e-08!11;CL:0000542!3.85e-08!13;CL:0000051!3.85e-08!13;CL:0000791!8.85e-08!9;CL:0000789!8.85e-08!9;CL:0002420!8.85e-08!9;CL:0002419!8.85e-08!9;CL:0000790!8.85e-08!9;CL:0000624!4.90e-07!8
|ontology_enrichment_celltype_v019_2=CL:0000838,3.84e-21,12;CL:0000791,9.97e-20,9;CL:0000789,9.97e-20,9;CL:0002420,9.97e-20,9;CL:0002419,9.97e-20,9;CL:0000790,9.97e-20,9;CL:0000542,2.59e-19,13;CL:0000051,2.59e-19,13;CL:0000084,4.89e-19,11;CL:0000827,4.89e-19,11;CL:0000624,1.46e-17,8;CL:0000738,3.75e-14,17;CL:0002087,3.75e-14,17;CL:0000893,1.15e-13,6;CL:0002489,1.15e-13,6;CL:0000898,1.15e-13,6;CL:0000809,1.15e-13,6;CL:0000810,1.15e-13,6;CL:0000895,1.15e-13,6;CL:0000808,1.15e-13,6;CL:0000894,1.15e-13,6;CL:0000806,1.15e-13,6;CL:0000807,1.15e-13,6;CL:0000805,1.15e-13,6;CL:0002425,1.15e-13,6;CL:0002436,1.15e-13,6;CL:0002427,1.15e-13,6;CL:0002428,1.15e-13,6;CL:0002429,1.15e-13,6;CL:0002433,1.15e-13,6;CL:0002431,1.15e-13,6;CL:0002432,1.15e-13,6;CL:0000988,1.42e-13,32;CL:0002032,1.42e-13,32;CL:0000037,1.42e-13,32;CL:0000837,1.42e-13,32;CL:0002031,2.48e-12,25;CL:0002320,2.81e-08,46;CL:0000134,2.81e-08,46;CL:0000034,6.26e-07,97
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000153!2.17e-08!94;UBERON:0002370!1.43e-07!23;UBERON:0000974!1.43e-07!23;UBERON:0004807!1.43e-07!23;UBERON:0005058!1.43e-07!23;UBERON:0003351!1.43e-07!23;UBERON:0009113!1.43e-07!23;UBERON:0003295!1.43e-07!23;UBERON:0009722!1.43e-07!23;UBERON:0005562!1.43e-07!23;UBERON:0007690!1.43e-07!23;UBERON:0007811!2.63e-07!86;UBERON:0006562!7.01e-07!24;UBERON:0003408!7.01e-07!24;UBERON:0001557!7.01e-07!24;UBERON:0001042!7.01e-07!24;UBERON:0008814!7.01e-07!24;UBERON:0009145!7.01e-07!24
|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.75e-09,23;UBERON:0000974,5.75e-09,23;UBERON:0004807,5.75e-09,23;UBERON:0005058,5.75e-09,23;UBERON:0003351,5.75e-09,23;UBERON:0009113,5.75e-09,23;UBERON:0003295,5.75e-09,23;UBERON:0009722,5.75e-09,23;UBERON:0005562,5.75e-09,23;UBERON:0007690,5.75e-09,23;UBERON:0006562,1.70e-08,24;UBERON:0003408,1.70e-08,24;UBERON:0001557,1.70e-08,24;UBERON:0001042,1.70e-08,24;UBERON:0008814,1.70e-08,24;UBERON:0009145,1.70e-08,24;UBERON:0002384,2.81e-08,46;UBERON:0000072,2.69e-07,27
|phase1_expression=0.960893082628764,0,0,0,0,0,0.233612640595526,1.80772652818207,3.23814060948833,6.31974221069382,2.22583358693156,2.07407613387875,4.10881751834894,2.53519167015092,0,0.202475267389826,0,1.41957974411207,0.959801035240171,1.27316895539409,16.4983982893075,1.09220046320974,0.783599367416806,0.159992422793407,0,0,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0.782391344348039,0.436050312760893,0,0.194429899074283,0.419959264876088,0,4.36234775750115,2.90144856804538,7.39406358113421,0,0.286533439938757,0,1.41621522601718,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.311068836925433,0.405017814995072,0.420649922702764,0.856952953211411,1.10434270475807,0.122490799214954,0.287536413054709,2.75765635983006,0,0,0,0.659431438650969,0.914876436024097,0.52091337055676,0,0.56276261003168,0,0.589257170947335,1.42371680799103,1.4911955666024,0,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0.704217098883403,0,0,0,0,0,0,2.8545969929765,1.29468941823586,0,0,0,0,0.150722640552623,0.23517741427141,0.125666591329675,0,0.433798070759735,0.884610551949874,0,0.220841518460394,0,0,0,0.41889341362691,0.255457055208591,1.07833612055328,1.19980546198682,1.01656181658452,0.449371918214468,0,2.01046963380583,0,0.255715457330331,0,0.162241263067758,0.305518091550949,0.248813941220186,0.252722758433675,0,0.520481771850815,0.459804208866946,0.900310649026746,0.60281927134286,0.476255494059295,0.12811372028485,0.0937017245597288,0,0.215567992932842,0.189106080167819,0.527853372491847,0.876782929710299,0.556094498451196,0.348252166522167,0,0.199034266818493,0,0.51469581422943,0.284163499395593,0.414251545071004,0,0,0,0.393528463494808,0,0,0,0.350296027101508,0,0.32833492815819,0.162137619091711,0,0,0,0.210289948564127,0.102904612379284,0.660837565967596,0,0,0.464473343720877,0,0,0.22237804384487,0.190225626112559,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0.569003702859245,0.114248512609729,0,0.407302655690628,0.581857461502877,0.280543279561274,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0.241177159752417,0,0,0.324270453550071,0,0,0,0,0,0,0,0.369506380333209,0.37898282354097,0,0,0,0.335012514883631,0,0,0,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0,0.35163505977661,0.163934945376675,0,0,1.17131623288992,0,0.238968797952552,0,0,0.404810701674894,0,0,0.321321316421807,0.141940085208269,0.178065603667255,1.46598263418218,0.329940245945071,0,0.485561272309963,0,0,0,0,0,0,0,0,0,1.03135543248187,0,0.540183282093931,0.388076051348264,0.214337035031592,0.177340233642274,0.535106452806212,0.329098041204242,0.304464949114599,0.23467170806371,0.21183207086382,0.220528398054962,0,0.322928853391811,0.180938774784468,0,0,0,0,0.341741761595705,0,0,0,0.410082683163076,0,2.03974115992626,0.839708713941948,1.52019971184866,0,0.158167996790568,0.609958401380546,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0.26175594198403,0,0,131.340454713416,0.598066184175915,0.165458490457098,0.777804753376191,0.387479470433193,0.506868376472335,0.234714477291508,0.39061315453185,2.72634295506848,37.2039546072049,58.7581212766046,0.632022241256357,0.608175645870493,0.410843828659309,0.389762468933385,0.716106782669926,0.198681354781265,0.480781798079875,0.590758108698309,0.807731599585181,1.06689529317,1.31074040677893,1.46186821109629,1.05833025804362,1.16876902181569,0,0,0.179427713218951,0,0.19318959403219,0,0,0,0,1.12950368523413,0.460325236507177,0.572895513439397,1.3748254587495,0,1.5107877947794,0,0.45032120322422,0,0,0.31136204275253,1.19707462020309,0.512200817262403,0.243106717068294,0.209613162627982,0,0,0,0.320919209591815,0.252697211763798,0.760437899670719,0.565879024158229,0.280924522409647,0.448176066834085,0.516919220600519,0,0.347652977834566,0.38581844092741,0.412085900803307,0.294397840268795,0,0.354951612318675,0.238436189947321,0.290692833264657,0.0941093804153306,0.0846146078916765,0.182927972872773,0.263069711437843,0,0,0.237270036248348,0.0985044823755635,0.409231043169689,0,0.192906610981141,0.249810577937946,0,0.644613162144895,0.191288332068843,0,0
|phase1_expression=0.960893082628764,0,0,0,0,0,0.233612640595526,1.80772652818207,3.23814060948833,6.31974221069382,2.22583358693156,2.07407613387875,4.10881751834894,2.53519167015092,0,0.202475267389826,0,1.41957974411207,0.959801035240171,1.27316895539409,16.4983982893075,1.09220046320974,0.783599367416806,0.159992422793407,0,0,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0.782391344348039,0.436050312760893,0,0.194429899074283,0.419959264876088,0,4.36234775750115,2.90144856804538,7.39406358113421,0,0.286533439938757,0,1.41621522601718,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.311068836925433,0.405017814995072,0.420649922702764,0.856952953211411,1.10434270475807,0.122490799214954,0.287536413054709,2.75765635983006,0,0,0,0.659431438650969,0.914876436024097,0.52091337055676,0,0.56276261003168,0,0.589257170947335,1.42371680799103,1.4911955666024,0,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0.704217098883403,0,0,0,0,0,0,2.8545969929765,1.29468941823586,0,0,0,0,0.150722640552623,0.23517741427141,0.125666591329675,0,0.433798070759735,0.884610551949874,0,0.220841518460394,0,0,0,0.41889341362691,0.255457055208591,1.07833612055328,1.19980546198682,1.01656181658452,0.449371918214468,0,2.01046963380583,0,0.255715457330331,0,0.162241263067758,0.305518091550949,0.248813941220186,0.252722758433675,0,0.520481771850815,0.459804208866946,0.900310649026746,0.60281927134286,0.476255494059295,0.12811372028485,0.0937017245597288,0,0.215567992932842,0.189106080167819,0.527853372491847,0.876782929710299,0.556094498451196,0.348252166522167,0,0.199034266818493,0,0.51469581422943,0.284163499395593,0.414251545071004,0,0,0,0.393528463494808,0,0,0,0.350296027101508,0,0.32833492815819,0.162137619091711,0,0,0,0.210289948564127,0.102904612379284,0.660837565967596,0,0,0.464473343720877,0,0,0.22237804384487,0.190225626112559,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0.569003702859245,0.114248512609729,0,0.407302655690628,0.581857461502877,0.280543279561274,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0.241177159752417,0,0,0.324270453550071,0,0,0,0,0,0,0,0.369506380333209,0.37898282354097,0,0,0,0.335012514883631,0,0,0,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0,0.35163505977661,0.163934945376675,0,0,1.17131623288992,0,0.238968797952552,0,0,0.404810701674894,0,0,0.321321316421807,0.141940085208269,0.178065603667255,1.46598263418218,0.329940245945071,0,0.485561272309963,0,0,0,0,0,0,0,0,0,1.03135543248187,0,0.540183282093931,0.388076051348264,0.214337035031592,0.177340233642274,0.535106452806212,0.329098041204242,0.304464949114599,0.23467170806371,0.21183207086382,0.220528398054962,0,0.322928853391811,0.180938774784468,0,0,0,0,0.341741761595705,0,0,0,0.410082683163076,0,2.03974115992626,0.839708713941948,1.52019971184866,0,0.158167996790568,0.609958401380546,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0.26175594198403,0,0,131.340454713416,0.598066184175915,0.165458490457098,0.777804753376191,0.387479470433193,0.506868376472335,0.234714477291508,0.39061315453185,2.72634295506848,37.2039546072049,58.7581212766046,0.632022241256357,0.608175645870493,0.410843828659309,0.389762468933385,0.716106782669926,0.198681354781265,0.480781798079875,0.590758108698309,0.807731599585181,1.06689529317,1.31074040677893,1.46186821109629,1.05833025804362,1.16876902181569,0,0,0.179427713218951,0,0.19318959403219,0,0,0,0,1.12950368523413,0.460325236507177,0.572895513439397,1.3748254587495,0,1.5107877947794,0,0.45032120322422,0,0,0.31136204275253,1.19707462020309,0.512200817262403,0.243106717068294,0.209613162627982,0,0,0,0.320919209591815,0.252697211763798,0.760437899670719,0.565879024158229,0.280924522409647,0.448176066834085,0.516919220600519,0,0.347652977834566,0.38581844092741,0.412085900803307,0.294397840268795,0,0.354951612318675,0.238436189947321,0.290692833264657,0.0941093804153306,0.0846146078916765,0.182927972872773,0.263069711437843,0,0,0.237270036248348,0.0985044823755635,0.409231043169689,0,0.192906610981141,0.249810577937946,0,0.644613162144895,0.191288332068843,0,0
|short_description=p3@Rnf138
}}
}}

Latest revision as of 02:28, 27 September 2015

Short description:p3@Rnf138
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Rnf138_5end
Coexpression cluster:MCL_coexpression_mm9:0
Association with transcript: 131bp_to_ENSMUST00000052396, ENSMUST00000072847, ENSMUST00000167653, NM_019706, NM_207623, uc008efb.1, uc008efc.1, uc012bae.1_5end
EntrezGene:Rnf138
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Rnf138

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.81
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.24
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F26.32
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.07
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.11
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.54
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.42
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.96
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A316.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A24.36
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A17.39
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.91
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.49
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.85
accessory axillary lymph node, adult.CNhs10475.1063-29H91.29
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.08
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.02
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F12.01
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.48
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I41.47
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.04
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.52
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G5131.34
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D92.73
testis, neonate N20.CNhs11110.839-18H337.20
testis, neonate N30.CNhs11130.1391-42E258.76
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.81
thymus, neonate N07.CNhs11211.713-19D31.07
thymus, neonate N10.CNhs11194.748-24E41.31
thymus, neonate N20.CNhs11186.820-7A21.46
thymus, neonate N25.CNhs11125.1362-25G71.06
thymus, neonate N30.CNhs11132.1393-42G21.17
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.52
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
lymphoid lineage restricted progenitor cell3.84e-2112
mature alpha-beta T cell9.97e-209
alpha-beta T cell9.97e-209
immature T cell9.97e-209
mature T cell9.97e-209
immature alpha-beta T cell9.97e-209
lymphocyte2.59e-1913
common lymphoid progenitor2.59e-1913
T cell4.89e-1911
pro-T cell4.89e-1911
CD4-positive, alpha-beta T cell1.46e-178
leukocyte3.75e-1417
nongranular leukocyte3.75e-1417
thymocyte1.15e-136
double negative thymocyte1.15e-136
naive T cell1.15e-136
double-positive, alpha-beta thymocyte1.15e-136
CD4-positive, alpha-beta thymocyte1.15e-136
naive thymus-derived CD4-positive, alpha-beta T cell1.15e-136
DN4 thymocyte1.15e-136
DN1 thymic pro-T cell1.15e-136
DN2 thymocyte1.15e-136
DN3 thymocyte1.15e-136
immature single positive thymocyte1.15e-136
early T lineage precursor1.15e-136
mature CD4 single-positive thymocyte1.15e-136
resting double-positive thymocyte1.15e-136
double-positive blast1.15e-136
CD69-positive double-positive thymocyte1.15e-136
CD69-positive, CD4-positive single-positive thymocyte1.15e-136
CD4-positive, CD8-intermediate double-positive thymocyte1.15e-136
CD24-positive, CD4 single-positive thymocyte1.15e-136
hematopoietic cell1.42e-1332
hematopoietic oligopotent progenitor cell1.42e-1332
hematopoietic stem cell1.42e-1332
hematopoietic multipotent progenitor cell1.42e-1332
hematopoietic lineage restricted progenitor cell2.48e-1225
connective tissue cell2.81e-0846
mesenchymal cell2.81e-0846
stem cell6.26e-0797
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