FFCP PHASE1:Mm9::chr1:127573733..127573745,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:127573733..127573745,+
|short_description=p7@Gpr39
|description=CAGE_peak_7_at_Gpr39_5end
|association_with_transcript=160bp_to_NM_027677,uc007ckh.2_5end
...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=71111 | |EntrezGene=71111 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=98 | |||
|TSSclassifier=NA | |||
|UniProt=Q5U431 | |UniProt=Q5U431 | ||
|association_with_transcript=160bp_to_NM_027677,uc007ckh.2_5end | |||
|cluster_id=chr1:127573733..127573745,+ | |||
|description=CAGE_peak_7_at_Gpr39_5end | |||
|id=chr1:127573733..127573745,+ | |||
|ontology_enrichment_celltype=CL:0000680!2.34e-14!6;CL:0000183!2.34e-14!6;CL:0000187!2.34e-14!6;CL:0000056!2.34e-14!6;CL:0000222!3.62e-12!7;CL:0000355!3.00e-09!9;CL:0000192!3.95e-08!3;CL:0000359!3.95e-08!3;CL:0002539!3.95e-08!3;CL:0000514!3.95e-08!3;CL:0002494!7.66e-08!3;CL:0000737!7.66e-08!3;CL:0000746!7.66e-08!3;CL:0000513!7.66e-08!3;CL:0000068!1.39e-07!3;CL:0002202!1.39e-07!3;CL:0000069!1.39e-07!3;CL:0002632!1.39e-07!3;CL:0002368!1.39e-07!3;CL:0000307!1.39e-07!3;CL:0000377!1.39e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,3.23e-52,6;CL:0000187,3.23e-52,6;CL:0000056,3.23e-52,6;CL:0000222,7.50e-45,7;CL:0000192,1.17e-38,3;CL:0000359,1.17e-38,3;CL:0002539,1.17e-38,3;CL:0000514,1.17e-38,3;CL:0000355,5.09e-35,9;CL:0002494,2.33e-17,3;CL:0000737,2.33e-17,3;CL:0000746,2.33e-17,3;CL:0000513,2.33e-17,3;CL:0002321,6.38e-09,70;CL:0000393,2.28e-08,39;CL:0000211,2.28e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!3.00e-09!9;UBERON:0002036!3.00e-09!9;UBERON:0002385!3.00e-09!9;UBERON:0000486!3.00e-09!9;UBERON:0001015!3.00e-09!9;UBERON:0004290!3.00e-09!9;UBERON:0003082!3.00e-09!9;UBERON:0000383!3.15e-08!10;UBERON:0001135!3.95e-08!3;UBERON:0004237!3.95e-08!3;UBERON:0004695!3.95e-08!3;UBERON:0002111!3.95e-08!3;UBERON:0004178!3.95e-08!3;UBERON:0003126!1.39e-07!3;UBERON:0001005!1.39e-07!3;UBERON:0007196!1.39e-07!3;UBERON:0001558!1.39e-07!3;UBERON:0002329!2.15e-07!11;UBERON:0003077!2.15e-07!11;UBERON:0003059!2.15e-07!11;UBERON:0007282!2.15e-07!11;UBERON:0009618!2.15e-07!11;UBERON:0007285!2.15e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,1.17e-38,3;UBERON:0004237,1.17e-38,3;UBERON:0004695,1.17e-38,3;UBERON:0002111,1.17e-38,3;UBERON:0004178,1.17e-38,3;UBERON:0001134,5.09e-35,9;UBERON:0002036,5.09e-35,9;UBERON:0002385,5.09e-35,9;UBERON:0000486,5.09e-35,9;UBERON:0007503,5.09e-35,9;UBERON:0001015,5.09e-35,9;UBERON:0002329,5.09e-35,9;UBERON:0003082,5.09e-35,9;UBERON:0003059,5.09e-35,9;UBERON:0007282,5.09e-35,9;UBERON:0004290,5.09e-35,9;UBERON:0009618,5.09e-35,9;UBERON:0000383,1.42e-31,10;UBERON:0000947,3.12e-29,4;UBERON:0001637,3.12e-29,4;UBERON:0004573,3.12e-29,4;UBERON:0003509,3.12e-29,4;UBERON:0004571,3.12e-29,4;UBERON:0010191,3.12e-29,4;UBERON:0004572,3.12e-29,4;UBERON:0007524,9.39e-29,11;UBERON:0003077,9.39e-29,11;UBERON:0007285,9.39e-29,11;UBERON:0000055,1.45e-23,5;UBERON:0007500,1.45e-23,5;UBERON:0001981,1.45e-23,5;UBERON:0002049,1.45e-23,5;UBERON:0007798,1.45e-23,5;UBERON:0004537,1.45e-23,5;UBERON:0006965,1.45e-23,5;UBERON:0004535,5.55e-14,23;UBERON:0001009,5.55e-14,23;UBERON:0002204,3.85e-10,32;UBERON:0004872,7.66e-10,33;UBERON:0005256,2.79e-07,45;UBERON:0000490,5.28e-07,66;UBERON:0003914,5.58e-07,47 | |||
|phase1_expression=0,0,0,0,0.500895729946347,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0.22940928106717,0,0,0.430942465371778,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.28049181116963,4.8660926985367,2.9367480345869,0,0,0,0,0,0,0,0,0,1.54355661621568,1.71920063963254,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170430322578058,0,0,0,1.28326477414318,0,0,1.73192832808971,0.253359865475099,0.505524445014783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414251545071004,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0.179397413521912,0,0,0,0.162964976442026,0,0,0,0,0,0.157635144106191,0,0,0,0,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0.134864346384821,0,0,0.129614973291793,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0.500895729946347,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0.22940928106717,0,0,0.430942465371778,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.28049181116963,4.8660926985367,2.9367480345869,0,0,0,0,0,0,0,0,0,1.54355661621568,1.71920063963254,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170430322578058,0,0,0,1.28326477414318,0,0,1.73192832808971,0.253359865475099,0.505524445014783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414251545071004,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0.179397413521912,0,0,0,0.162964976442026,0,0,0,0,0,0.157635144106191,0,0,0,0,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0.134864346384821,0,0,0.129614973291793,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p7@Gpr39 | |||
}} | }} |
Latest revision as of 07:05, 26 September 2015
Short description: | p7@Gpr39 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Gpr39_5end |
Coexpression cluster: | MCL_coexpression_mm9:98 |
Association with transcript: | 160bp_to_NM_027677, uc007ckh.2_5end |
EntrezGene: | Gpr39 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 3.23e-52 | 6 |
muscle cell | 3.23e-52 | 6 |
myoblast | 3.23e-52 | 6 |
mesodermal cell | 7.50e-45 | 7 |
smooth muscle cell | 1.17e-38 | 3 |
vascular associated smooth muscle cell | 1.17e-38 | 3 |
aortic smooth muscle cell | 1.17e-38 | 3 |
smooth muscle myoblast | 1.17e-38 | 3 |
multi-potent skeletal muscle stem cell | 5.09e-35 | 9 |
cardiocyte | 2.33e-17 | 3 |
striated muscle cell | 2.33e-17 | 3 |
cardiac muscle cell | 2.33e-17 | 3 |
cardiac muscle myoblast | 2.33e-17 | 3 |
embryonic cell | 6.38e-09 | 70 |
electrically responsive cell | 2.28e-08 | 39 |
electrically active cell | 2.28e-08 | 39 |