FFCP PHASE1:Mm9::chr1:99558527..99558590,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:99558527..99558590,-
|short_description=p1@D1Ertd622e
|description=CAGE_peak_1_at_D1Ertd622e_5end
|association_with_transcript=4bp_to_NM_133825,uc007cfh.2,...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=52392 | |EntrezGene=52392 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt=Q8VEB3 | |UniProt=Q8VEB3 | ||
|association_with_transcript=4bp_to_NM_133825,uc007cfh.2,uc011wpw.1_5end | |||
|cluster_id=chr1:99558527..99558590,- | |||
|description=CAGE_peak_1_at_D1Ertd622e_5end | |||
|id=chr1:99558527..99558590,- | |||
|ontology_enrichment_celltype=CL:0000117!6.32e-12!23;CL:0000337!6.32e-12!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.32e-12,23;CL:0000337,6.32e-12,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!5.85e-09!34;UBERON:0001049!2.49e-08!52;UBERON:0005068!2.49e-08!52;UBERON:0006241!2.49e-08!52;UBERON:0007135!2.49e-08!52;UBERON:0002371!1.84e-07!16;UBERON:0002405!2.92e-07!70;UBERON:0001474!3.61e-07!22;UBERON:0004765!3.61e-07!22;UBERON:0001434!3.61e-07!22;UBERON:0000955!4.16e-07!50;UBERON:0006238!4.16e-07!50;UBERON:0001017!5.39e-07!73;UBERON:0005743!5.39e-07!73;UBERON:0002616!6.49e-07!49;UBERON:0000073!6.83e-07!75;UBERON:0001016!6.83e-07!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,2.17e-10,194;UBERON:0000073,5.42e-09,54;UBERON:0002020,5.85e-09,34;UBERON:0001049,2.49e-08,52;UBERON:0005068,2.49e-08,52;UBERON:0006241,2.49e-08,52;UBERON:0007135,2.49e-08,52;UBERON:0002371,1.84e-07,16;UBERON:0001474,3.61e-07,22;UBERON:0004765,3.61e-07,22;UBERON:0001434,3.61e-07,22;UBERON:0001017,5.39e-07,73;UBERON:0001016,6.83e-07,75;UBERON:0002346,8.53e-07,64;UBERON:0003075,8.53e-07,64;UBERON:0007284,8.53e-07,64 | |||
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|phase1_expression=7.8472935081349,26.1731555729521,33.6699437148257,27.2217790176147,25.5456822272637,8.89760141133016,8.64366770203445,12.2667157269497,19.1472662126267,17.5548394741495,2.91070545983358,4.3874687447435,10.6144452557348,7.69299541287177,36.9751835615386,32.8009933171518,51.0680171033547,23.1864691538305,23.4465681465813,25.8877687596798,10.5453679787327,2.38298282882125,4.4403964153619,17.9191513528615,20.188016733911,29.285830169866,18.0920038386811,23.0554218973901,27.7434192406306,28.7314347926321,20.399206980288,15.2407361630311,13.5314253268605,0,5.77703239502549,10.9714865936605,6.73758875665818,175.783284909501,150.01638614857,135.592649689214,222.351502475723,198.766236122908,194.204141212461,5.28766635497425,6.18399280439039,7.70896359079063,18.7773922643529,12.209408757305,8.34807494390993,13.6100929351998,14.1386285841616,20.125359011096,48.4891731506858,14.5072428402269,14.7881271622684,6.17422646486273,7.44986943840768,6.18806510732931,30.1451526680801,29.0945038599618,33.5930643858275,9.82649143000483,8.89294796111139,42.2952867122258,22.7439263390404,38.3659262070894,15.579205746957,16.5213871288268,24.1596796678753,23.6260392080459,28.604194743788,30.8503063156108,28.2711732418065,28.6628470162992,20.7984672109573,40.4456266108409,25.3266526298594,28.2189017168265,21.6585211891303,35.3455251116919,37.1439833025783,35.4221091978597,29.5933978941464,24.1987922313622,21.5445529365302,30.3467443037878,28.7590795214188,33.1791013569035,13.4035362199736,10.202160614416,7.53647670624362,12.0459342777394,25.8389106808945,4.31762553310254,9.09686984426737,7.16843019355737,12.9208866521212,10.0553890321054,6.49465011507172,11.3068663843309,11.9716906810178,1.28326477414318,5.09610479413291,7.11066703153331,16.4533191168523,14.9482320630308,12.6381111253696,15.0722721229159,15.7952109024775,4.15637989381509,7.11289839741157,6.69824052286711,8.99400439298628,6.0289056221049,6.23220147819235,6.28332956648377,6.67426412882809,6.36237170447611,32.7305904221453,11.8089800461609,21.6424688091186,17.455509112868,16.775258509631,17.5668478206928,14.4518227701284,28.3557331281536,20.2487560415005,22.7963037777495,25.541115641686,23.9665023047716,15.5550204958333,29.5287727465231,16.5133104182663,17.6443665557928,21.4021685896347,16.8730913590468,8.86002465497752,17.2925689148029,11.1198013710817,12.416069497302,7.54698569183682,10.5754968039398,12.0641626969584,12.0563854268572,18.9141467640691,12.1708034270607,14.4300655821982,20.4375662883822,4.52692785158969,7.56424320671277,7.38994721488585,5.47989331068937,5.83899223373756,7.66154766348766,6.37924622864625,5.57295947091781,23.1730351813367,18.7863972193742,28.9846769383505,5.59239585845855,4.45599513964083,5.22179978236943,5.68187365404505,3.93528463494808,4.16521204795921,3.48800917125612,6.43856163359086,5.25444040652263,4.11399624783701,3.2833492815819,5.10733500138891,4.38599962275997,5.04965265169416,3.89198614405078,14.5100064509248,22.5361101110633,55.8407743242619,23.800550999719,5.33220626338085,5.80591679651096,4.89696353023955,7.26060688644033,11.5636582799333,15.7887269673424,23.2519240156811,21.2461651593974,23.3741744184251,21.2883425084031,21.8359777573415,19.7740269903929,25.5042898852139,30.6677560811725,9.293727146701,8.45438993311993,7.88954149711563,6.10953983535943,7.17624202520215,9.88915060453492,11.5090497566148,15.0562350939194,13.1878931386755,16.5352199655213,16.3048944897932,21.0224833202278,23.3905204184712,32.1552820710341,26.3718157805054,25.5647789337562,24.1894559192349,16.3986798346962,20.2669033468794,17.2973690308491,24.4405951096503,17.4906245404197,10.6092808858951,15.1547326768267,10.4050499842709,18.8152973331713,14.5955020231618,7.20067364727842,4.4000543639347,5.60158783058121,5.39787571063555,7.87279409976534,9.99783291721258,11.7080188714679,12.6108115284953,11.0732344824387,11.9591076493115,13.2729284919748,12.9513736399422,8.67894351489069,25.6345182696763,32.6343410291226,4.42587845717133,4.69092468718045,23.7614873181932,25.0833009307315,10.0000316679772,13.8859009962405,5.67914794949262,5.46614242015294,7.32439552291516,8.84184552424442,5.79276552614225,8.49229592366497,4.85772842009873,6.72188473196017,3.55759000151871,19.6006003017302,14.7617688616599,6.58842733568844,9.44744364250741,16.1670720513085,5.30980553359851,4.85561272309963,8.16273603804828,6.60117779145643,4.13422650033082,6.45613810682248,10.3371317267288,7.27067458955011,7.84294232446387,6.95280867458795,3.16255825724996,5.15677716240934,6.46835250932197,8.10274923140896,10.3486947026204,9.21649250635847,8.15765074754458,11.4156043265325,12.8348236069654,7.30715877875038,3.28540391289194,3.1774810629573,6.83638033970382,7.25499512942512,6.62004149453213,6.75504759195346,5.96861720015682,4.26766339337159,21.569581910609,25.0324157714188,25.2888903580822,17.3364969089107,26.1124283591293,32.9644799758209,28.5690935936943,32.0289442489132,10.0287273696375,13.7152423277185,13.4053974590291,18.1387417422872,7.90839983952838,7.116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| ||
|short_description=p1@D1Ertd622e | |||
}} | }} |
Latest revision as of 20:42, 1 October 2015
Short description: | p1@D1Ertd622e |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_D1Ertd622e_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 4bp_to_NM_133825, uc007cfh.2, uc011wpw.1_5end |
EntrezGene: | D1Ertd622e |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.32e-12 | 23 |
neuroblast (sensu Vertebrata) | 6.32e-12 | 23 |
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 2.17e-10 | 194 |
regional part of nervous system | 5.42e-09 | 54 |
gray matter | 5.85e-09 | 34 |
neural tube | 2.49e-08 | 52 |
neural rod | 2.49e-08 | 52 |
future spinal cord | 2.49e-08 | 52 |
neural keel | 2.49e-08 | 52 |
bone marrow | 1.84e-07 | 16 |
bone element | 3.61e-07 | 22 |
skeletal element | 3.61e-07 | 22 |
skeletal system | 3.61e-07 | 22 |
central nervous system | 5.39e-07 | 73 |
nervous system | 6.83e-07 | 75 |
neurectoderm | 8.53e-07 | 64 |
neural plate | 8.53e-07 | 64 |
presumptive neural plate | 8.53e-07 | 64 |