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FFCP PHASE1:Mm9::chr3:97101729..97101756,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr3:97101729..97101756,-
|DHSsupport=NA
|short_description=p3@ENSMUST00000110986,p3@uc008qou.1
|DPIdataset=NA
|description=CAGE_peak_3_at_ENSMUST00000110986_5end,CAGE_peak_3_at_uc008qou.1_5end
|association_with_transcript=-28bp_to_ENSMUST00000110986,uc008qou.1_5end
|EntrezGene=
|EntrezGene=
|HGNC=
|HGNC=
|MCL_coexpression_id=108
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=-28bp_to_ENSMUST00000110986,uc008qou.1_5end
|cluster_id=chr3:97101729..97101756,-
|description=CAGE_peak_3_at_ENSMUST00000110986_5end,CAGE_peak_3_at_uc008qou.1_5end
|id=chr3:97101729..97101756,-
|ontology_enrichment_celltype=CL:0000117!6.70e-11!23;CL:0000337!6.70e-11!23;CL:0000540!1.62e-07!33;CL:0000047!1.62e-07!33;CL:0000031!1.62e-07!33;CL:0000404!1.62e-07!33;CL:0000221!8.52e-07!44;CL:0000133!8.52e-07!44
|ontology_enrichment_celltype_v019_2=CL:0000117,9.17e-16,23;CL:0000337,9.17e-16,23;CL:0000540,8.96e-09,33;CL:0000047,8.96e-09,33;CL:0000031,8.96e-09,33;CL:0000404,8.96e-09,33;CL:0002609,4.98e-08,6;CL:0002319,2.59e-07,43;CL:0000221,5.52e-07,44;CL:0000133,5.52e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!4.83e-09!52;UBERON:0005068!4.83e-09!52;UBERON:0006241!4.83e-09!52;UBERON:0007135!4.83e-09!52;UBERON:0000073!4.94e-09!75;UBERON:0001016!4.94e-09!75;UBERON:0002346!6.30e-09!71;UBERON:0003075!6.30e-09!71;UBERON:0007284!6.30e-09!71;UBERON:0003056!6.55e-09!49;UBERON:0000033!9.11e-09!63;UBERON:0001017!2.34e-08!73;UBERON:0005743!2.34e-08!73;UBERON:0002616!9.38e-08!49;UBERON:0000955!1.16e-07!50;UBERON:0006238!1.16e-07!50;UBERON:0004121!1.63e-07!102;UBERON:0000924!1.63e-07!102;UBERON:0006601!1.63e-07!102;UBERON:0002780!2.04e-07!39;UBERON:0001890!2.04e-07!39;UBERON:0006240!2.04e-07!39;UBERON:0003080!2.18e-07!40;UBERON:0002020!6.13e-07!34
|ontology_enrichment_uberon_v019_2=UBERON:0003056,5.63e-10,49;UBERON:0002346,6.94e-09,64;UBERON:0003075,6.94e-09,64;UBERON:0007284,6.94e-09,64;UBERON:0000073,4.01e-08,54;UBERON:0002780,4.99e-08,39;UBERON:0001890,4.99e-08,39;UBERON:0006240,4.99e-08,39;UBERON:0003080,1.19e-07,40;UBERON:0001049,1.48e-07,52;UBERON:0005068,1.48e-07,52;UBERON:0006241,1.48e-07,52;UBERON:0007135,1.48e-07,52;UBERON:0002020,1.60e-07,34;UBERON:0001016,4.78e-07,75;UBERON:0004121,9.40e-07,95;UBERON:0000924,9.40e-07,95;UBERON:0006601,9.40e-07,95
|phase1_expression=0.80074423552397,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0.171200729931206,0.0874204024189974,0,0,0,0,0,0,0.595303031057488,0,0,0.319984845586813,0,0,0,0.215471232685889,0,0,0.443461021310609,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0.304130793658544,0.550640256485045,0.782391344348039,0.872100625521786,0.439372365468944,0,0.139986421625363,0,0,0,0.336093799142464,0,0,0,5.86717736492834,6.34789175126439,5.70448263155561,0.338844532069132,0,0,0,0,1.19840044207362,0,7.46565208621039,9.18040380655497,7.57169860864975,1.99955689082663,1.10434270475807,8.08439274818697,13.9934387686625,7.35375029288017,1.10115880999389,0.383062014255563,1.0752457327937,5.14356522147756,7.68496206260241,4.68822033501084,0,1.68828783009504,1.37518422999129,1.76777151284201,1.70846016958924,2.42319279572891,1.28734528666413,2.72057616384428,0,0,0,0,0,0,0,0,0.259786004602869,0,0.704217098883403,0,0,0,0,0,0,0,0,0,2.08182392119363,0.304465478312141,0.461230994512117,0,0.352766121407114,0.125666591329675,0.247194967734374,0,0,0,0.220841518460394,0,0,0.878342391034642,0.41889341362691,0.255457055208591,0,0,0.254140454146129,0.449371918214468,0,3.64397621127307,0.695297280769106,0.255715457330331,1.0389402227978,1.1356888414743,1.93494791315601,0,0,0,3.12289063110489,1.60931473103431,1.80062129805349,1.35634336052144,1.42876648217788,1.0249097622788,1.68663104207512,0.258703370739016,2.58681591519411,2.83659120251729,2.11141348996739,1.53437012699302,1.94633074457919,0,0.411564272815887,2.7864797354589,0,0.257347907114715,0,4.14251545071004,3.04883877975425,1.44049649168812,1.65721314909647,0.590292695242212,0.771335564436891,0.930135779001631,0.536546802799238,0.583826711835847,0.493679549740441,0,0.324275238183423,0.438599962275997,0.658650345873152,0.671032093801859,1.89260953707715,6.5858951922742,0,0.264450566663544,2.13288250535234,2.09013004674395,1.03093969057675,0.605050573870028,0.667134131534611,0.380451252225118,0,0.329397909448022,0.251335208800269,0.397912944082302,0.38992817423824,0,0.216138049874694,0.199141273254367,2.65535061334314,2.28497025219458,2.25415471346161,1.62921062276251,2.52138233317913,2.10407459670956,0.316182685621286,0,0,0,0,0.500535317148282,0.589676985339609,0,0,0.241177159752417,0,0,0,0.274561413188081,0,0.372140947668503,0,0,0,0,0,1.89491411770485,1.95557971730431,2.8856664581782,1.64283173801951,0.837531287209079,0.238043640886014,0.195133647857799,0.630540576424764,0.8858587585951,0.159454768657487,0.163863314715738,0,0.289298117163023,0,0,0,0.275936746304732,0.160550589987792,0.35163505977661,0,0.252470927204373,0,0.390438744296638,0.215423397732799,0,0.668396022247182,0.566153061577665,0.404810701674894,0.292255857911312,0,0.321321316421807,0.425820255624806,3.5613120733451,1.95464351224291,0.494910368917606,1.32745138339963,1.69946445308487,0.604647113929502,0.188605079755898,0,0.307435147943927,0,0,0.712994756769443,0,0,0,1.36175842301515,4.14140516272013,2.32845630808958,1.92903331528433,1.95074257006501,1.42695054081656,0.822745103010605,0,0,0.21183207086382,0,0,0.484393280087717,0,0,0,0,0.370850604021019,0,1.23832120777933,1.29636169158798,0,0.136694227721025,0,0.339956859987711,0.419854356970974,0.276399947608848,0,3.95419991976419,1.82987520414164,1.08005340821801,0.627264888043406,0.87345025498471,0.269728692769641,0.0826534557253359,0.26175594198403,0.259229946583586,0,0,3.28936401296753,2.31641886639937,3.11121901350476,2.19571699912143,1.01373675294467,2.46450201156083,0.911430693907651,1.04859344425711,0,0,0,1.01362607645082,0.924398614483445,0.389762468933385,0.179026695667481,0,0.120195449519969,0.147689527174577,0.100966449948148,0.15241361331,0.100826185136841,0.0974578807397524,0,0.116876902181569,0.226730383615211,0,0,0,0,0.375364950902364,1.28206136987086,0,0,1.6942555278512,0.920650473014354,0.572895513439397,0.859265911718438,0,0.755393897389701,0.675022500231806,0,0,0.51776031175182,3.1136204275253,0.798049746802062,2.39027048055788,3.16038732188782,1.67690530102386,1.2869045591501,1.33348036680969,0.618105171716683,0.64183841918363,0.252697211763798,1.01391719956096,0.943131706930381,1.21733959710847,1.40855335290712,1.26358031702349,0.952587382566147,1.85414921511769,0.578727661391115,2.06042950401653,1.32479028120958,1.71434626192708,0.70990322463735,1.1921809497366,1.16277133305863,1.12931256498397,1.01537529470012,0.914639864363863,1.57841826862706,0.679020569229309,1.12228454331548,0.949080144993393,0.886540341380071,0,0.77468420592983,0.771626443924566,1.99848462350357,0.935726433781634,0.859484216193193,0.956441660344217,0.661774257358546,0
|phase1_expression=0.80074423552397,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0.171200729931206,0.0874204024189974,0,0,0,0,0,0,0.595303031057488,0,0,0.319984845586813,0,0,0,0.215471232685889,0,0,0.443461021310609,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0.304130793658544,0.550640256485045,0.782391344348039,0.872100625521786,0.439372365468944,0,0.139986421625363,0,0,0,0.336093799142464,0,0,0,5.86717736492834,6.34789175126439,5.70448263155561,0.338844532069132,0,0,0,0,1.19840044207362,0,7.46565208621039,9.18040380655497,7.57169860864975,1.99955689082663,1.10434270475807,8.08439274818697,13.9934387686625,7.35375029288017,1.10115880999389,0.383062014255563,1.0752457327937,5.14356522147756,7.68496206260241,4.68822033501084,0,1.68828783009504,1.37518422999129,1.76777151284201,1.70846016958924,2.42319279572891,1.28734528666413,2.72057616384428,0,0,0,0,0,0,0,0,0.259786004602869,0,0.704217098883403,0,0,0,0,0,0,0,0,0,2.08182392119363,0.304465478312141,0.461230994512117,0,0.352766121407114,0.125666591329675,0.247194967734374,0,0,0,0.220841518460394,0,0,0.878342391034642,0.41889341362691,0.255457055208591,0,0,0.254140454146129,0.449371918214468,0,3.64397621127307,0.695297280769106,0.255715457330331,1.0389402227978,1.1356888414743,1.93494791315601,0,0,0,3.12289063110489,1.60931473103431,1.80062129805349,1.35634336052144,1.42876648217788,1.0249097622788,1.68663104207512,0.258703370739016,2.58681591519411,2.83659120251729,2.11141348996739,1.53437012699302,1.94633074457919,0,0.411564272815887,2.7864797354589,0,0.257347907114715,0,4.14251545071004,3.04883877975425,1.44049649168812,1.65721314909647,0.590292695242212,0.771335564436891,0.930135779001631,0.536546802799238,0.583826711835847,0.493679549740441,0,0.324275238183423,0.438599962275997,0.658650345873152,0.671032093801859,1.89260953707715,6.5858951922742,0,0.264450566663544,2.13288250535234,2.09013004674395,1.03093969057675,0.605050573870028,0.667134131534611,0.380451252225118,0,0.329397909448022,0.251335208800269,0.397912944082302,0.38992817423824,0,0.216138049874694,0.199141273254367,2.65535061334314,2.28497025219458,2.25415471346161,1.62921062276251,2.52138233317913,2.10407459670956,0.316182685621286,0,0,0,0,0.500535317148282,0.589676985339609,0,0,0.241177159752417,0,0,0,0.274561413188081,0,0.372140947668503,0,0,0,0,0,1.89491411770485,1.95557971730431,2.8856664581782,1.64283173801951,0.837531287209079,0.238043640886014,0.195133647857799,0.630540576424764,0.8858587585951,0.159454768657487,0.163863314715738,0,0.289298117163023,0,0,0,0.275936746304732,0.160550589987792,0.35163505977661,0,0.252470927204373,0,0.390438744296638,0.215423397732799,0,0.668396022247182,0.566153061577665,0.404810701674894,0.292255857911312,0,0.321321316421807,0.425820255624806,3.5613120733451,1.95464351224291,0.494910368917606,1.32745138339963,1.69946445308487,0.604647113929502,0.188605079755898,0,0.307435147943927,0,0,0.712994756769443,0,0,0,1.36175842301515,4.14140516272013,2.32845630808958,1.92903331528433,1.95074257006501,1.42695054081656,0.822745103010605,0,0,0.21183207086382,0,0,0.484393280087717,0,0,0,0,0.370850604021019,0,1.23832120777933,1.29636169158798,0,0.136694227721025,0,0.339956859987711,0.419854356970974,0.276399947608848,0,3.95419991976419,1.82987520414164,1.08005340821801,0.627264888043406,0.87345025498471,0.269728692769641,0.0826534557253359,0.26175594198403,0.259229946583586,0,0,3.28936401296753,2.31641886639937,3.11121901350476,2.19571699912143,1.01373675294467,2.46450201156083,0.911430693907651,1.04859344425711,0,0,0,1.01362607645082,0.924398614483445,0.389762468933385,0.179026695667481,0,0.120195449519969,0.147689527174577,0.100966449948148,0.15241361331,0.100826185136841,0.0974578807397524,0,0.116876902181569,0.226730383615211,0,0,0,0,0.375364950902364,1.28206136987086,0,0,1.6942555278512,0.920650473014354,0.572895513439397,0.859265911718438,0,0.755393897389701,0.675022500231806,0,0,0.51776031175182,3.1136204275253,0.798049746802062,2.39027048055788,3.16038732188782,1.67690530102386,1.2869045591501,1.33348036680969,0.618105171716683,0.64183841918363,0.252697211763798,1.01391719956096,0.943131706930381,1.21733959710847,1.40855335290712,1.26358031702349,0.952587382566147,1.85414921511769,0.578727661391115,2.06042950401653,1.32479028120958,1.71434626192708,0.70990322463735,1.1921809497366,1.16277133305863,1.12931256498397,1.01537529470012,0.914639864363863,1.57841826862706,0.679020569229309,1.12228454331548,0.949080144993393,0.886540341380071,0,0.77468420592983,0.771626443924566,1.99848462350357,0.935726433781634,0.859484216193193,0.956441660344217,0.661774257358546,0
|short_description=p3@ENSMUST00000110986,p3@uc008qou.1
}}
}}

Latest revision as of 09:47, 4 August 2015

Short description:p3@ENSMUST00000110986, p3@uc008qou.1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_ENSMUST00000110986_5end, CAGE_peak_3_at_uc008qou.1_5end
Coexpression cluster:MCL_coexpression_mm9:108
Association with transcript: -28bp_to_ENSMUST00000110986, uc008qou.1_5end
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@ENSMUST00000110986p3@uc008qou.1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C35.87
Mouse Granule cells, donor2.CNhs12357.11731-123E36.35
Mouse Granule cells, donor3.CNhs12108.11636-122C75.70
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.47
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F59.18
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D97.57
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D28.08
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F213.99
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D67.35
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.08
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.14
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.68
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.38
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.42
Mouse Schwann, donor1.CNhs12507.11728-123D91.29
Mouse Schwann, donor2.CNhs12573.11746-123F92.72
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C52.08
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F13.64
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B21.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.93
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C63.12
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C91.80
eyeball, embryo E17.CNhs11023.1261-18D41.36
eyeball, neonate N00.CNhs11207.633-15C61.43
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G81.69
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E22.59
forelimb, embryo E12.CNhs10600.359-14H22.84
forelimb, embryo E13.CNhs10589.384-1E22.11
forelimb, embryo E14.CNhs10577.413-26A81.53
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I62.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E94.14
heart, embryo E12.CNhs11015.353-12F53.05
heart, embryo E13.CNhs11013.376-3I91.44
heart, embryo E14.CNhs10597.403-26D41.66
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.67
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G16.59
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I52.13
intestine, embryo E13.CNhs11010.381-16D52.09
intestine, embryo E15.CNhs10602.976-16D81.03
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I92.66
kidney, embryo E15.CNhs10997.434-16F82.28
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I21.63
kidney, embryo E18.CNhs11001.1288-20C72.52
kidney, neonate N00.CNhs11214.646-21G72.10
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G21.89
lung, embryo E14.CNhs10604.404-26F81.96
lung, embryo E15.CNhs11020.432-17C52.89
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H73.56
ovary, neonate N00.CNhs11217.1299-22I41.95
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F41.70
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E64.14
pituitary gland, embryo E13.CNhs11009.370-44C72.33
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B91.95
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F21.30
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E33.95
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D41.08
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F53.29
testis, embryo E15.CNhs11034.443-27C52.32
testis, embryo E16.CNhs11033.470-26G53.11
testis, embryo E17.CNhs11029.486-18I52.20
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B72.46
testis, neonate N07.CNhs11222.726-26I40.91
testis, neonate N10.CNhs11204.763-44D91.05
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I20.92
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E51.28
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I83.11
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H22.39
whole body, embryo E14.5.CNhs10578.420-27D23.16
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)9.17e-1623
neuroblast (sensu Vertebrata)9.17e-1623
neuron8.96e-0933
neuronal stem cell8.96e-0933
neuroblast8.96e-0933
electrically signaling cell8.96e-0933
neuron of cerebral cortex4.98e-086
neural cell2.59e-0743
ectodermal cell5.52e-0744
neurectodermal cell5.52e-0744

Uber anatomy
Ontology termp-valuen
pre-chordal neural plate5.63e-1049
neurectoderm6.94e-0964
neural plate6.94e-0964
presumptive neural plate6.94e-0964
regional part of nervous system4.01e-0854
regional part of forebrain4.99e-0839
forebrain4.99e-0839
future forebrain4.99e-0839
anterior neural tube1.19e-0740
neural tube1.48e-0752
neural rod1.48e-0752
future spinal cord1.48e-0752
neural keel1.48e-0752
gray matter1.60e-0734
nervous system4.78e-0775
ectoderm-derived structure9.40e-0795
ectoderm9.40e-0795
presumptive ectoderm9.40e-0795
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