FFCP PHASE2:Hg19::chrX:70364667..70364721,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:54413 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:14289 |TSScla...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=54413 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=14289 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q9NZ94,E7EVK0,D3DVV1,F5H3M0,Q4G160,Q86V51,D2X2H6 | ||
|association_with_transcript=0bp_to_ENST00000358741,ENST00000374051,ENST00000395855,ENST00000536169,ENST00000542063,NM_001166660,NM_018977,NM_181303,uc004dzb.2,uc004dzc.2,uc010nlb.1_5end | |association_with_transcript=0bp_to_ENST00000358741,ENST00000374051,ENST00000395855,ENST00000536169,ENST00000542063,NM_001166660,NM_018977,NM_181303,uc004dzb.2,uc004dzc.2,uc010nlb.1_5end | ||
|cluster_id=chrX:70364667..70364721,+ | |cluster_id=chrX:70364667..70364721,+ |
Latest revision as of 06:51, 16 September 2015
Short description: | p1@NLGN3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NLGN3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000358741, ENST00000374051, ENST00000395855, ENST00000536169, ENST00000542063, NM_001166660, NM_018977, NM_181303, uc004dzb.2, uc004dzc.2, uc010nlb.1_5end |
EntrezGene: | NLGN3 |
HGNC: | 14289 |
UniProt: | Q9NZ94E7EVK0D3DVV1F5H3M0Q4G160Q86V51D2X2H6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@NLGN3 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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neuronal stem cell | 7.09e-10 | 8 |
neuron | 2.81e-07 | 6 |
neuroblast | 2.81e-07 | 6 |
electrically signaling cell | 2.81e-07 | 6 |
Showing 1 to 4 of 4 entries
Ontology term | p-value | n |
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neural tube | 1.17e-70 | 56 |
neural rod | 1.17e-70 | 56 |
future spinal cord | 1.17e-70 | 56 |
neural keel | 1.17e-70 | 56 |
central nervous system | 6.13e-69 | 81 |
nervous system | 7.92e-68 | 89 |
regional part of nervous system | 1.12e-66 | 53 |
regional part of brain | 1.12e-66 | 53 |
neural plate | 2.74e-56 | 82 |
presumptive neural plate | 2.74e-56 | 82 |
Showing 1 to 10 of 78 entries