FFCP PHASE1:Mm9::chr4:122563148..122563162,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:122563148..122563162,-
|short_description=p3@Cap1
|description=CAGE_peak_3_at_Cap1_5end
|association_with_transcript=0bp_to_ENSMUST00000069533_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=12331 | |EntrezGene=12331 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt=P40124 | |UniProt=P40124 | ||
|association_with_transcript=0bp_to_ENSMUST00000069533_5end | |||
|cluster_id=chr4:122563148..122563162,- | |||
|description=CAGE_peak_3_at_Cap1_5end | |||
|id=chr4:122563148..122563162,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!4.00e-08!63;UBERON:0004121!6.46e-08!102;UBERON:0000924!6.46e-08!102;UBERON:0006601!6.46e-08!102;UBERON:0002791!1.12e-07!29;UBERON:0003528!1.12e-07!29;UBERON:0001893!1.12e-07!29;UBERON:0002020!1.29e-07!34;UBERON:0001049!1.38e-07!52;UBERON:0005068!1.38e-07!52;UBERON:0006241!1.38e-07!52;UBERON:0007135!1.38e-07!52;UBERON:0000073!2.02e-07!75;UBERON:0001016!2.02e-07!75;UBERON:0000955!2.12e-07!50;UBERON:0006238!2.12e-07!50;UBERON:0002616!4.74e-07!49;UBERON:0007023!5.15e-07!51;UBERON:0001017!8.85e-07!73;UBERON:0005743!8.85e-07!73 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.70e-09,95;UBERON:0000924,1.70e-09,95;UBERON:0006601,1.70e-09,95;UBERON:0010371,9.38e-09,73;UBERON:0003528,1.11e-07,29;UBERON:0002791,1.11e-07,29;UBERON:0001893,1.11e-07,29;UBERON:0001049,1.27e-07,52;UBERON:0005068,1.27e-07,52;UBERON:0006241,1.27e-07,52;UBERON:0007135,1.27e-07,52;UBERON:0002020,1.28e-07,34;UBERON:0001016,1.99e-07,75;UBERON:0000955,2.09e-07,47;UBERON:0006238,2.09e-07,47;UBERON:0000073,2.95e-07,54;UBERON:0002346,3.60e-07,64;UBERON:0003075,3.60e-07,64;UBERON:0007284,3.60e-07,64;UBERON:0007023,4.51e-07,51;UBERON:0002616,4.74e-07,46;UBERON:0001017,8.73e-07,73 | |||
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| ||
|short_description=p3@Cap1 | |||
}} | }} |
Latest revision as of 07:14, 26 September 2015
Short description: | p3@Cap1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Cap1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 0bp_to_ENSMUST00000069533_5end |
EntrezGene: | Cap1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 1.70e-09 | 95 |
ectoderm | 1.70e-09 | 95 |
presumptive ectoderm | 1.70e-09 | 95 |
ecto-epithelium | 9.38e-09 | 73 |
brain grey matter | 1.11e-07 | 29 |
regional part of telencephalon | 1.11e-07 | 29 |
telencephalon | 1.11e-07 | 29 |
neural tube | 1.27e-07 | 52 |
neural rod | 1.27e-07 | 52 |
future spinal cord | 1.27e-07 | 52 |
neural keel | 1.27e-07 | 52 |
gray matter | 1.28e-07 | 34 |
nervous system | 1.99e-07 | 75 |
brain | 2.09e-07 | 47 |
future brain | 2.09e-07 | 47 |
regional part of nervous system | 2.95e-07 | 54 |
neurectoderm | 3.60e-07 | 64 |
neural plate | 3.60e-07 | 64 |
presumptive neural plate | 3.60e-07 | 64 |
adult organism | 4.51e-07 | 51 |
regional part of brain | 4.74e-07 | 46 |
central nervous system | 8.73e-07 | 73 |