FFCP PHASE1:Mm9::chr5:77780274..77780292,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:77780274..77780292,-
|short_description=p@chr5:77780274..77780292,-
|description=CAGE_peak_at_chr5:77780274..77780292,-
|association_with_transcript=NA
|E...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=850 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:77780274..77780292,- | |||
|description=CAGE_peak_at_chr5:77780274..77780292,- | |||
|id=chr5:77780274..77780292,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.18e-10,7;CL:0002494,3.40e-10,3;CL:0000737,3.40e-10,3;CL:0000746,3.40e-10,3;CL:0000513,3.40e-10,3;CL:0000068,1.10e-08,3;CL:0002202,1.10e-08,3;CL:0000069,1.10e-08,3;CL:0002632,1.10e-08,3;CL:0002368,1.10e-08,3;CL:0000307,1.10e-08,3;CL:0000377,1.10e-08,3;CL:0000680,3.42e-08,6;CL:0000187,3.42e-08,6;CL:0000056,3.42e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!9.19e-10!193;UBERON:0004120!9.19e-10!193;UBERON:0006603!9.19e-10!193;UBERON:0009569!8.56e-09!66;UBERON:0002100!1.27e-08!98;UBERON:0003104!2.09e-07!131;UBERON:0009142!2.09e-07!131;UBERON:0005177!6.47e-07!85;UBERON:0004872!8.13e-07!33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,1.87e-11,90;UBERON:0005178,7.57e-09,17;UBERON:0005181,7.57e-09,17;UBERON:0002224,7.57e-09,17;UBERON:0000915,7.57e-09,17;UBERON:0008947,7.57e-09,17;UBERON:0003258,7.57e-09,17;UBERON:0003126,1.10e-08,3;UBERON:0001005,1.10e-08,3;UBERON:0007196,1.10e-08,3;UBERON:0001558,1.10e-08,3;UBERON:0005177,2.56e-07,79 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0.137114433605739,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.755380907853464,0.912392380975631,1.10128051297009,0.782391344348039,0.218025156380447,0,0.388859798148567,0,1.43752564364972,0,0,0,8.2323019531503,10.3152038377952,10.3134418455488,0,0,0,0.677689064138264,0,0.449949858640699,1.97773272513395,2.1314403448383,0.299600110518405,0,0,0.135005938331691,0,0.285650984403804,0.441737081903227,0,0,0,0,0.127687338085188,0.153606533256243,0,0.274462930807229,0,0,0,0.15279824777681,0,0,0,0,0,2.6087803983151,0,0,0,0.649776417447669,0,0.702222100658759,0.170430322578058,0.259786004602869,0.70667914902068,0,0,0,0,1.29894624606728,1.01343946190039,4.04419556011827,0.34255163915718,0,0.742210695324124,0,0.608930956624282,0.922461989024234,0.301445281105245,0.940709657085638,1.0053327306374,0.494389935468748,0.86759614151947,0,0.485300549842228,0.441683036920787,0.969750506270444,0,0,0.83778682725382,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0.712875546952214,0.746441823660558,0.252722758433675,0.210441855886474,0,0,0.180062129805349,0,0.136072998302656,0.640568601424249,0.374806898238915,1.29351685369508,0,0,0,0.219195732427575,0.278047249225598,0.696504333044333,0,0,0,0,0,0,0,0,0,0,0,0.465067889500816,0.268273401399619,0.350296027101508,0,0.32833492815819,0.972825714550269,0.877199924551994,0.219550115291051,0.671032093801859,0,0.102904612379284,0,0,0,0,0,0,0.22237804384487,0.190225626112559,1.89811624617805,0.164698954724011,0,0.397912944082302,0.58489226135736,1.79763881730844,0.648414149624083,0.398282546508734,0.569003702859245,0,0,1.01825663922657,0.193952487167626,0.98190147846446,2.52946148497029,2.21415221969403,2.19798218977925,2.46794327843601,0.296452627087149,0,0,0,0,0,0.50925170356284,0.287696137450811,0.972811360650212,0,0,0.372140947668503,0,0,0.538192240565737,0.482443521363367,1.10851914099963,0,0,0,0,0.167506257441816,0.238043640886014,0.780534591431195,0.157635144106191,1.32878813789265,0.956728611944923,1.14704320301017,1.89953480052485,1.3018415272336,0,0.54390568381871,0,0.551873492609465,0.160550589987792,0.117211686592203,0,0.757412781613119,0,0,0,0,0,0,0.809621403349789,0,0,0,0.709700426041343,0.35613120733451,0.488660878060728,1.48473110675282,1.32745138339963,0,0,0,0,0,0,1.09060118843252,0.356497378384721,1.58018378967908,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0.164549020602121,0.304464949114599,0,1.0591603543191,0.441056796109924,0.16488625294148,0,0.241251699712623,0.477489376012546,0,0.582961673259701,0,0.854354403989263,0.412773735926445,0.740778109478847,0.941842285023455,0.683471138605126,0.915112692826091,0,0,0,1.90934123603023,0,0,0.324016022465404,0.209088296014469,0.218362563746178,0.539457385539283,0.661227645802687,0.785267825952089,0.259229946583586,0,0.56369293868419,0,0,0.194451188344048,0.516639293910924,0,0.352071715937262,0.13020438484395,0.314578033277133,0.241584120826006,0,0,0,0.102710957164827,0.129920822977795,0,0.39736270956253,0.240390899039938,0.147689527174577,0,0.15241361331,0,0.0974578807397524,0.0962118416403295,0,0.226730383615211,0,0,0,0.386379188064381,0.563047426353546,2.19781949120718,1.50057865355346,0.501572104035363,0,0,0.572895513439397,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0.25347929989024,0.188626341386076,0.0936415074698824,0,0.229741875822453,0,0.115884325944855,0,0.412085900803307,0.147198920134397,0.342869252385415,0.177475806159338,0,0.436039249896986,0,0.169229215783353,0.182927972872773,0.263069711437843,0.135804113845862,0,0,0,0.409231043169689,0,0,0,0,0.429742108096597,0.382576664137687,0.661774257358546,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0.137114433605739,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.755380907853464,0.912392380975631,1.10128051297009,0.782391344348039,0.218025156380447,0,0.388859798148567,0,1.43752564364972,0,0,0,8.2323019531503,10.3152038377952,10.3134418455488,0,0,0,0.677689064138264,0,0.449949858640699,1.97773272513395,2.1314403448383,0.299600110518405,0,0,0.135005938331691,0,0.285650984403804,0.441737081903227,0,0,0,0,0.127687338085188,0.153606533256243,0,0.274462930807229,0,0,0,0.15279824777681,0,0,0,0,0,2.6087803983151,0,0,0,0.649776417447669,0,0.702222100658759,0.170430322578058,0.259786004602869,0.70667914902068,0,0,0,0,1.29894624606728,1.01343946190039,4.04419556011827,0.34255163915718,0,0.742210695324124,0,0.608930956624282,0.922461989024234,0.301445281105245,0.940709657085638,1.0053327306374,0.494389935468748,0.86759614151947,0,0.485300549842228,0.441683036920787,0.969750506270444,0,0,0.83778682725382,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0.712875546952214,0.746441823660558,0.252722758433675,0.210441855886474,0,0,0.180062129805349,0,0.136072998302656,0.640568601424249,0.374806898238915,1.29351685369508,0,0,0,0.219195732427575,0.278047249225598,0.696504333044333,0,0,0,0,0,0,0,0,0,0,0,0.465067889500816,0.268273401399619,0.350296027101508,0,0.32833492815819,0.972825714550269,0.877199924551994,0.219550115291051,0.671032093801859,0,0.102904612379284,0,0,0,0,0,0,0.22237804384487,0.190225626112559,1.89811624617805,0.164698954724011,0,0.397912944082302,0.58489226135736,1.79763881730844,0.648414149624083,0.398282546508734,0.569003702859245,0,0,1.01825663922657,0.193952487167626,0.98190147846446,2.52946148497029,2.21415221969403,2.19798218977925,2.46794327843601,0.296452627087149,0,0,0,0,0,0.50925170356284,0.287696137450811,0.972811360650212,0,0,0.372140947668503,0,0,0.538192240565737,0.482443521363367,1.10851914099963,0,0,0,0,0.167506257441816,0.238043640886014,0.780534591431195,0.157635144106191,1.32878813789265,0.956728611944923,1.14704320301017,1.89953480052485,1.3018415272336,0,0.54390568381871,0,0.551873492609465,0.160550589987792,0.117211686592203,0,0.757412781613119,0,0,0,0,0,0,0.809621403349789,0,0,0,0.709700426041343,0.35613120733451,0.488660878060728,1.48473110675282,1.32745138339963,0,0,0,0,0,0,1.09060118843252,0.356497378384721,1.58018378967908,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0.164549020602121,0.304464949114599,0,1.0591603543191,0.441056796109924,0.16488625294148,0,0.241251699712623,0.477489376012546,0,0.582961673259701,0,0.854354403989263,0.412773735926445,0.740778109478847,0.941842285023455,0.683471138605126,0.915112692826091,0,0,0,1.90934123603023,0,0,0.324016022465404,0.209088296014469,0.218362563746178,0.539457385539283,0.661227645802687,0.785267825952089,0.259229946583586,0,0.56369293868419,0,0,0.194451188344048,0.516639293910924,0,0.352071715937262,0.13020438484395,0.314578033277133,0.241584120826006,0,0,0,0.102710957164827,0.129920822977795,0,0.39736270956253,0.240390899039938,0.147689527174577,0,0.15241361331,0,0.0974578807397524,0.0962118416403295,0,0.226730383615211,0,0,0,0.386379188064381,0.563047426353546,2.19781949120718,1.50057865355346,0.501572104035363,0,0,0.572895513439397,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0.25347929989024,0.188626341386076,0.0936415074698824,0,0.229741875822453,0,0.115884325944855,0,0.412085900803307,0.147198920134397,0.342869252385415,0.177475806159338,0,0.436039249896986,0,0.169229215783353,0.182927972872773,0.263069711437843,0.135804113845862,0,0,0,0.409231043169689,0,0,0,0,0.429742108096597,0.382576664137687,0.661774257358546,0 | ||
|short_description=p@chr5:77780274..77780292,- | |||
}} | }} |
Latest revision as of 15:22, 4 August 2015
Short description: | p@chr5:77780274..77780292, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:77780274..77780292, - |
Coexpression cluster: | MCL_coexpression_mm9:850 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.18e-10 | 7 |
cardiocyte | 3.40e-10 | 3 |
striated muscle cell | 3.40e-10 | 3 |
cardiac muscle cell | 3.40e-10 | 3 |
cardiac muscle myoblast | 3.40e-10 | 3 |
duct epithelial cell | 1.10e-08 | 3 |
epithelial cell of tracheobronchial tree | 1.10e-08 | 3 |
branched duct epithelial cell | 1.10e-08 | 3 |
epithelial cell of lower respiratory tract | 1.10e-08 | 3 |
respiratory epithelial cell | 1.10e-08 | 3 |
tracheal epithelial cell | 1.10e-08 | 3 |
tracheoblast | 1.10e-08 | 3 |
muscle precursor cell | 3.42e-08 | 6 |
muscle cell | 3.42e-08 | 6 |
myoblast | 3.42e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
trunk | 1.87e-11 | 90 |
thoracic cavity element | 7.57e-09 | 17 |
thoracic segment organ | 7.57e-09 | 17 |
thoracic cavity | 7.57e-09 | 17 |
thoracic segment of trunk | 7.57e-09 | 17 |
respiratory primordium | 7.57e-09 | 17 |
endoderm of foregut | 7.57e-09 | 17 |
trachea | 1.10e-08 | 3 |
respiratory airway | 1.10e-08 | 3 |
tracheobronchial tree | 1.10e-08 | 3 |
lower respiratory tract | 1.10e-08 | 3 |
trunk region element | 2.56e-07 | 79 |