FFCP PHASE1:Mm9::chr8:113253955..113253976,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:113253955..113253976,+
|short_description=p@chr8:113253955..113253976,+
|description=CAGE_peak_at_chr8:113253955..113253976,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=791 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr8:113253955..113253976,+ | |||
|description=CAGE_peak_at_chr8:113253955..113253976,+ | |||
|id=chr8:113253955..113253976,+ | |||
|ontology_enrichment_celltype=CL:0002319!3.45e-10!43;CL:0000221!6.57e-10!44;CL:0000133!6.57e-10!44;CL:0000117!7.73e-09!23;CL:0000337!7.73e-09!23;CL:0000055!2.98e-08!50;CL:0000540!3.79e-08!33;CL:0000047!3.79e-08!33;CL:0000031!3.79e-08!33;CL:0000404!3.79e-08!33;CL:0000393!9.24e-07!39;CL:0000211!9.24e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.66e-14,43;CL:0000221,4.70e-14,44;CL:0000133,4.70e-14,44;CL:0002453,1.75e-12,8;CL:0000333,1.01e-09,10;CL:0000095,1.01e-09,10;CL:0000243,1.01e-09,10;CL:0000123,1.01e-09,10;CL:0000125,1.01e-09,10;CL:0000030,1.01e-09,10;CL:0000339,1.01e-09,10;CL:0002321,7.09e-09,70;CL:0000128,1.30e-08,6;CL:0000126,1.30e-08,6;CL:0000127,1.30e-08,6;CL:0000540,1.45e-07,33;CL:0000047,1.45e-07,33;CL:0000031,1.45e-07,33;CL:0000404,1.45e-07,33;CL:0000117,2.29e-07,23;CL:0000337,2.29e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.14e-16!73;UBERON:0005743!1.14e-16!73;UBERON:0000073!2.15e-15!75;UBERON:0001016!2.15e-15!75;UBERON:0004121!3.60e-15!102;UBERON:0000924!3.60e-15!102;UBERON:0006601!3.60e-15!102;UBERON:0001049!7.57e-11!52;UBERON:0005068!7.57e-11!52;UBERON:0006241!7.57e-11!52;UBERON:0007135!7.57e-11!52;UBERON:0000955!3.95e-10!50;UBERON:0006238!3.95e-10!50;UBERON:0002616!1.24e-09!49;UBERON:0002346!3.11e-09!71;UBERON:0003075!3.11e-09!71;UBERON:0007284!3.11e-09!71;UBERON:0000033!7.68e-09!63;UBERON:0002020!1.40e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.29e-18,73;UBERON:0001016,6.63e-18,75;UBERON:0004121,1.26e-13,95;UBERON:0000924,1.26e-13,95;UBERON:0006601,1.26e-13,95;UBERON:0000073,1.80e-08,54;UBERON:0001049,5.87e-08,52;UBERON:0005068,5.87e-08,52;UBERON:0006241,5.87e-08,52;UBERON:0007135,5.87e-08,52;UBERON:0003076,2.95e-07,12;UBERON:0003057,2.95e-07,12;UBERON:0000955,4.11e-07,47;UBERON:0006238,4.11e-07,47;UBERON:0011216,4.70e-07,194 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.304130793658544,0,0,3.05235218932625,2.41654801007919,1.36100929351998,1.81982348112971,1.43752564364972,0,0,0,0.257259436035947,0.286533439938757,0,1.21389876515759,2.11596391708813,1.90149421051854,0,0,0,0,0,3.29560121570245,4.61061966385865,0.518448061542388,1.08004750665353,0.630974884054146,0.571301968807607,1.10434270475807,0.489963196859816,0.670918297127655,0,2.20231761998777,1.0214987046815,0.46081959976873,1.05509030184155,1.28082701043374,0.52091337055676,0.837548997004143,0.56276261003168,1.22238598221448,1.17851434189467,0.569486723196412,0.931997229126503,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,1.53387290320252,0.779358013808606,0.35333957451034,0.14084341977668,1.28326477414318,2.54805239706646,0,0,0,0,0.11418387971906,1.03575153458869,0.148442139064825,0,0.608930956624282,0,0.150722640552623,0.587943535678524,0.125666591329675,0.494389935468748,1.01219549843938,0,0.808834249737046,0.441683036920787,0.484875253135222,0,1.46390398505774,13.4045892360611,0,0,0,0,0.748953197024114,0.457500602818626,0.628271760564322,0.521472960576829,0.255715457330331,2.49345653471472,0.324482526135515,0.305518091550949,0.373220911830279,0,0,0.520481771850815,0,0.540186389416048,0.150704817835715,0.408218994907967,0.12811372028485,0.562210347358373,0.776110112217047,1.07783996466421,0.378212160335639,0.175951124163949,0.43839146485515,0.556094498451196,0,0.823128545631774,0.59710280045548,0,0,0,0,0.469052119962192,0.36012412292203,0.23674473558521,0.590292695242212,0,0,0,0.934122738937356,0,0,0.243206428637567,0.146199987425332,0.439100230582101,0.805238512562231,0.210289948564127,1.44066457330998,0,0,0.213288250535234,0.464473343720877,0.38660238396628,0,0.22237804384487,0.380451252225118,0,0.164698954724011,0,0,0.19496408711912,0.898819408654221,0.648414149624083,0,0.379335801906163,0.114248512609729,0,0.407302655690628,0.193952487167626,0.350679099451593,0.126473074248515,0.147610147979602,0.31399745568275,0,0,0,0.196558995113203,0,0,0,0.25462585178142,0,0.324270453550071,0,0,0,0.312037673114561,0,0,0.482443521363367,0.184753190166605,0.568474235311454,0.325929952884052,0.169745085775188,0.469380496577004,0.335012514883631,1.19021820443007,1.75620283072019,1.26108115284953,1.32878813789265,1.11618338060241,0.655453258862952,0.345369963731791,0.723245292907558,0,0,0.491764273019036,0.551873492609465,1.44495530989013,0.703270119553219,0.327869890753351,1.00988370881749,0.315508219416257,0,0.646270193198397,1.19484398976276,0.222798674082394,1.13230612315533,0.404810701674894,1.16902343164525,0,1.28528526568723,0.567760340833074,0.712262414669021,0.325773918707152,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.388076051348264,0.428674070063185,0.354680467284547,0.535106452806212,0.329098041204242,0.304464949114599,0.23467170806371,0.42366414172764,0.220528398054962,0.49465875882444,1.61464426695906,0.301564624640779,0.238744688006273,0.328281799490123,0.582961673259701,1.66882771809459,0.170870880797853,1.03193433981611,0.555583582109135,0,0.136694227721025,0,0,0,0,1.90934123603023,0.949007980743406,0.813277868507395,0.216010681643603,0.836353184057875,0.218362563746178,0.269728692769641,0.578574190077352,0,0,0,0,0.747582730219894,0.165458490457098,0.388902376688095,0,0,0.821500670520278,0,0,0,0.288030006257865,0,0.202725215290164,0.102710957164827,0.25984164595559,0.179026695667481,0.198681354781265,0,0.147689527174577,0.201932899896295,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0.680191150845634,0,0,0,0.772758376128762,0.375364950902364,0.36630324853453,0.643105137237198,0,2.82375921308533,0,1.71868654031819,0.343706364687375,0.685082519770642,0,0.675022500231806,2.2516060161211,0,0,0.207574695168353,1.19707462020309,0.682934423016537,0.972426868273176,0.419226325255965,0.367687016900028,0,0,0.64183841918363,0.758091635291392,0.25347929989024,0.188626341386076,0.280924522409647,0.384150914429216,0.459483751644906,0,0.231768651889711,0.578727661391115,0,0.147198920134397,0.342869252385415,0.177475806159338,0.238436189947321,0.290692833264657,0.188218760830661,0.169229215783353,0.182927972872773,0,0.679020569229309,0,0.355905054372522,0.197008964751127,0.409231043169689,0.464810523557898,0.192906610981141,0.499621155875892,0.233931608445408,1.07435527024149,1.14772999241306,0.220591419119515,0.231867835620421 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| ||
|short_description=p@chr8:113253955..113253976,+ | |||
}} | }} |
Latest revision as of 22:11, 5 August 2015
Short description: | p@chr8:113253955..113253976, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:113253955..113253976, + |
Coexpression cluster: | MCL_coexpression_mm9:791 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.66e-14 | 43 |
ectodermal cell | 4.70e-14 | 44 |
neurectodermal cell | 4.70e-14 | 44 |
oligodendrocyte precursor cell | 1.75e-12 | 8 |
migratory neural crest cell | 1.01e-09 | 10 |
neuron associated cell | 1.01e-09 | 10 |
glial cell (sensu Vertebrata) | 1.01e-09 | 10 |
neuron associated cell (sensu Vertebrata) | 1.01e-09 | 10 |
glial cell | 1.01e-09 | 10 |
glioblast | 1.01e-09 | 10 |
glioblast (sensu Vertebrata) | 1.01e-09 | 10 |
embryonic cell | 7.09e-09 | 70 |
oligodendrocyte | 1.30e-08 | 6 |
macroglial cell | 1.30e-08 | 6 |
astrocyte | 1.30e-08 | 6 |
neuron | 1.45e-07 | 33 |
neuronal stem cell | 1.45e-07 | 33 |
neuroblast | 1.45e-07 | 33 |
electrically signaling cell | 1.45e-07 | 33 |
CNS neuron (sensu Vertebrata) | 2.29e-07 | 23 |
neuroblast (sensu Vertebrata) | 2.29e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.29e-18 | 73 |
nervous system | 6.63e-18 | 75 |
ectoderm-derived structure | 1.26e-13 | 95 |
ectoderm | 1.26e-13 | 95 |
presumptive ectoderm | 1.26e-13 | 95 |
regional part of nervous system | 1.80e-08 | 54 |
neural tube | 5.87e-08 | 52 |
neural rod | 5.87e-08 | 52 |
future spinal cord | 5.87e-08 | 52 |
neural keel | 5.87e-08 | 52 |
posterior neural tube | 2.95e-07 | 12 |
chordal neural plate | 2.95e-07 | 12 |
brain | 4.11e-07 | 47 |
future brain | 4.11e-07 | 47 |
organ system subdivision | 4.70e-07 | 194 |