FFCP PHASE1:Hg19::chr10:111836795..111836820,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:111836795..111836820,+ to FFCP PHASE1:Hg19::chr10:111836795..111836820,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=120 | |EntrezGene=120 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=245 | |HGNC=245 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=32bp_to_ENST00000468345,ENST00000473669_5end | |||
|cluster_id=chr10:111836795..111836820,+ | |||
|coexpression_cluster_id=C272 | |||
|description=CAGE_peak_5_at_ADD3_5end | |||
|id=chr10:111836795..111836820,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.01e-28!172;CL:0000566!1.01e-28!172;CL:0000988!1.94e-27!182;CL:0002032!2.75e-26!165;CL:0000837!2.75e-26!165;CL:0000738!6.22e-24!140;CL:0000542!4.49e-22!53;CL:0000051!4.49e-22!53;CL:0000838!1.47e-21!52;CL:0002087!2.11e-19!119;CL:0002031!2.85e-17!124;CL:0000791!2.69e-12!18;CL:0000789!2.69e-12!18;CL:0002420!2.69e-12!18;CL:0002419!2.69e-12!18;CL:0000790!2.69e-12!18;CL:0000084!5.13e-11!25;CL:0000827!5.13e-11!25;CL:0000945!5.37e-10!24;CL:0000826!5.37e-10!24;CL:0000763!1.71e-08!112;CL:0000049!1.71e-08!112;CL:0000625!4.16e-08!11;CL:0000236!4.34e-08!14;CL:0000134!1.22e-07!358;CL:0002320!3.39e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000791;7.69e-16;18!CL:0000789;7.69e-16;18!CL:0002419;7.69e-16;18!CL:0000542;6.69e-15;53!CL:0000084;1.98e-14;25!CL:0000945;6.15e-11;24!CL:0000625;2.81e-10;11!CL:0000236;2.54e-09;13!CL:0002087;4.20e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,9.38e-30,168;CL:0000988,1.14e-29,177;CL:0000542,2.05e-27,53;CL:0000051,2.05e-27,53;CL:0002032,3.98e-27,161;CL:0000837,3.98e-27,161;CL:0000838,9.78e-27,52;CL:0000738,6.29e-25,136;CL:0002087,1.91e-20,115;CL:0002031,3.99e-17,120;CL:0000791,8.21e-16,18;CL:0000789,8.21e-16,18;CL:0002420,8.21e-16,18;CL:0002419,8.21e-16,18;CL:0000790,8.21e-16,18;CL:0000084,1.71e-14,25;CL:0000827,1.71e-14,25;CL:0000945,4.01e-11,24;CL:0000826,4.01e-11,24;CL:0000625,2.96e-10,11;CL:0000236,1.78e-09,14;CL:0000763,6.66e-07,108;CL:0000049,6.66e-07,108 | |||
|ontology_enrichment_development_v019=CL:0000790;7.69e-16;18!CL:0000051;6.69e-15;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.61e-10!115;UBERON:0000178!2.92e-10!15;UBERON:0000179!2.92e-10!15;UBERON:0000463!2.92e-10!15;UBERON:0002193!3.44e-09!112;UBERON:0002390!3.33e-08!102;UBERON:0003061!3.33e-08!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.93e-13;15!UBERON:0000179;3.93e-13;15!UBERON:0000463;3.93e-13;15!UBERON:0002390;3.83e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.14e-13,15;UBERON:0000179,4.14e-13,15;UBERON:0000463,4.14e-13,15;UBERON:0002193,1.52e-08,108;UBERON:0002390,1.70e-07,98;UBERON:0003061,1.70e-07,98 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0.261185628199839,0.491467873003018,0,0,0,0.247532705920093,0,0.672325146451775,0.602694528023977,1.46062018077475,0,0,0,0,0,0,0,11.9204912966804,9.85207073399349,15.6634454814222,5.50709987588466,30.3225224496798,5.41856431606266,0,0,0,0.542270404062111,0.710846162437108,2.05520307534393,9.41792194504192,5.41470008169383,7.16135873362311,2.01523926815932,4.85840499028469,2.57575567634187,1.16318591023652,0.755751887377619,0.485168122375632,1.85943229524548,1.6446715520873,0.309706370895104,2.01384674625505,0.768482119587302,0.236482229888585,2.06847408441971,1.93645405075148,1.35426486594342,1.12945403725563,0.818718450173537,1.57306439111559,2.14258724659632,2.88836124368484,0.639337125799041,0.329851300186716,0.598390972864896,0.852449501065388,0,1.13477044938228,0,1.00499466102697,0.521482918420201,1.52032191293582,3.02699751316684,0.736555271975129,0.949387162322653,2.32380814943136,1.06302149982522,2.30624510059213,2.69588714751588,3.45406853535464,6.91120022797445,0,0.19891667719909,0.91332076882317,70.3984977845291,96.1203955821351,112.967675240671,86.626235181001,97.296224849751,89.6613806328994,89.9021026987412,95.4053754535364,81.3974545826511,73.9918858607383,71.1028204312926,2.64342657158052,4.48406850385229,1.58030450865046,24.9821408044568,20.0435489002074,29.6066158559293,48.4840836632967,19.5553359980154,16.0972253949809,31.1722765452658,45.4554664091508,26.8091375802102,20.3811183016931,28.9760134228567,26.3868118634891,25.2315134266164,22.6924308353073,14.0938509070783,46.9480998890785,33.8093364009498,33.1750626831244,39.7234990458912,92.6870423266091,47.1361207130363,40.891666012433,79.9542226781629,36.316457232947,31.9030892389645,17.1081368000707,29.9644486964768,39.163903013252,38.7285252312272,39.5418010913508,27.9183518953156,29.2329777675862,19.2556940964125,13.9031427727487,0,2.01210257911091,2.04580098949649,0.361439152384566,0.50133791063589,0.434539556882471,0,0,0.189069634328136,0,0,0.589405839739707,0,0,0.324547393654683,0.522389211897802,0,0.476981248610684,2.85997455390064,1.85728750664782,2.58391129576717,1.72046919021225,1.38856200643038,0.56530794192401,1.25849830862972,0,0,0.258416759169329,0,8.36801531911676,12.4877088303836,11.4040815857777,8.05404789908959,4.04429388380456,0,4.19708722935175,2.2452937262617,3.82879033643296,0,0,1.64881569537367,2.63560834872127,7.75560528296651,0,0,0.506522046658319,0.529636723252875,2.0078563452417,1.06400514659507,0.560677600142307,0,0.24666754841716,0.622422070799533,1.34710672069688,1.47115712802113,1.05950199351452,2.30470369792,1.40592859100278,0.624320153660641,0,0,0.23486899728753,0.485618833104395,0.280901613404497,0.408308342509787,0.122834317311768,1.75653827998801,3.56400857184616,0,0,0.718618141816238,0.505008341862199,0.250237039743928,0.277064115484183,0,0.30648779579902,0,1.36118619792025,1.07633781413317,0.427114777637135,0,0,0.206105058476878,0.772921620136887,0.37223371266318,0.337552664482532,0.292311015483596,0.252433774244115,0.552299391853796,0.969876340912871,0.355009592516614,0.201504196455281,0,0,0,0.286804595389004,0,0,0,0.10366105501537,0,0,1.56449532329816,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0.441463099414651,0,0.514703430895577,0,0,0,0,0.651616610620649,0,0,0,0.469634776943287,4.76409277611544,2.31492756288305,5.32711626256875,0,0,0.246217006087397,0,0,0,0,0,0,0,0,3.94130590316755,5.10680917276711,2.28060927094849,0.576479813667846,0.50496973370552,0.571481048629521,0.381988425558278,1.17217447210047,0,1.02827492703324,1.20137223137567,2.85826432630578,1.23344192779897,3.92364061949952,3.5202377194056,0.129271715757778,0,0.845302752556,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0,2.43247561282381,0,0,0,1.14861935834114,0,1.15825045334063,1.2328579353023,1.07436577943937,49.5416336451391,48.0755054892702,29.3253501808944,27.2087236913067,0.508189248444927,0,0.773288812777695,0,0,8.23907726341901,11.966458368161,5.8018171881045,0.613457458595699,0.500170521059677,0.542530047399471,0,0.178428988797162,0.157702415033935,0.468565659970853,1.20378439891088,0,2.0694614258501,0,0,0.173767228936166,0,0,42.180677329069,24.1599904916851,17.7167745953718,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0.355123450626254,0.492762936082855,0.519254429183621,0,0,0,0.184161977871793,0.229628896329213,0.728364672026868,0.393373244878272,0,0,0,0,0.105551628892876,0,0.340187410553031,2.59099099322567,0,0,0,0,0,0,0.219259876645935,0.522870902049801,0.256450125116389,0,0,1.33953315142039,1.55668090191184,1.56768049849117,0,0,0,1.7400729292582,1.23238893691716,0.767518373630648,1.51620229732984,0.966782203814463,0.435050081742686,0.596586391912706,4.45160178233687,0.165284915360978,0.192190067365106,0,0.10115778085555,0.464845549297286,0,0,0,0,0,0.18532421910392,0,2.60510858551767,1.2655176988749,0.190630193923825,0,0.42793898803392,0,0,0.179872457583315,0,0.235624804691373,0.202182481573316,0,0.421258456238981,0,0.73114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|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0.261185628199839,0.491467873003018,0,0,0,0.247532705920093,0,0.672325146451775,0.602694528023977,1.46062018077475,0,0,0,0,0,0,0,11.9204912966804,9.85207073399349,15.6634454814222,5.50709987588466,30.3225224496798,5.41856431606266,0,0,0,0.542270404062111,0.710846162437108,2.05520307534393,9.41792194504192,5.41470008169383,7.16135873362311,2.01523926815932,4.85840499028469,2.57575567634187,1.16318591023652,0.755751887377619,0.485168122375632,1.85943229524548,1.6446715520873,0.309706370895104,2.01384674625505,0.768482119587302,0.236482229888585,2.06847408441971,1.93645405075148,1.35426486594342,1.12945403725563,0.818718450173537,1.57306439111559,2.14258724659632,2.88836124368484,0.639337125799041,0.329851300186716,0.598390972864896,0.852449501065388,0,1.13477044938228,0,1.00499466102697,0.521482918420201,1.52032191293582,3.02699751316684,0.736555271975129,0.949387162322653,2.32380814943136,1.06302149982522,2.30624510059213,2.69588714751588,3.45406853535464,6.91120022797445,0,0.19891667719909,0.91332076882317,70.3984977845291,96.1203955821351,112.967675240671,86.626235181001,97.296224849751,89.6613806328994,89.9021026987412,95.4053754535364,81.3974545826511,73.9918858607383,71.1028204312926,2.64342657158052,4.48406850385229,1.58030450865046,24.9821408044568,20.0435489002074,29.6066158559293,48.4840836632967,19.5553359980154,16.0972253949809,31.1722765452658,45.4554664091508,26.8091375802102,20.3811183016931,28.9760134228567,26.3868118634891,25.2315134266164,22.6924308353073,14.0938509070783,46.9480998890785,33.8093364009498,33.1750626831244,39.7234990458912,92.6870423266091,47.1361207130363,40.891666012433,79.9542226781629,36.316457232947,31.9030892389645,17.1081368000707,29.9644486964768,39.163903013252,38.7285252312272,39.5418010913508,27.9183518953156,29.2329777675862,19.2556940964125,13.9031427727487,0,2.01210257911091,2.04580098949649,0.361439152384566,0.50133791063589,0.434539556882471,0,0,0.189069634328136,0,0,0.589405839739707,0,0,0.324547393654683,0.522389211897802,0,0.476981248610684,2.85997455390064,1.85728750664782,2.58391129576717,1.72046919021225,1.38856200643038,0.56530794192401,1.25849830862972,0,0,0.258416759169329,0,8.36801531911676,12.4877088303836,11.4040815857777,8.05404789908959,4.04429388380456,0,4.19708722935175,2.2452937262617,3.82879033643296,0,0,1.64881569537367,2.63560834872127,7.75560528296651,0,0,0.506522046658319,0.529636723252875,2.0078563452417,1.06400514659507,0.560677600142307,0,0.24666754841716,0.622422070799533,1.34710672069688,1.47115712802113,1.05950199351452,2.30470369792,1.40592859100278,0.624320153660641,0,0,0.23486899728753,0.485618833104395,0.280901613404497,0.408308342509787,0.122834317311768,1.75653827998801,3.56400857184616,0,0,0.718618141816238,0.505008341862199,0.250237039743928,0.277064115484183,0,0.30648779579902,0,1.36118619792025,1.07633781413317,0.427114777637135,0,0,0.206105058476878,0.772921620136887,0.37223371266318,0.337552664482532,0.292311015483596,0.252433774244115,0.552299391853796,0.969876340912871,0.355009592516614,0.201504196455281,0,0,0,0.286804595389004,0,0,0,0.10366105501537,0,0,1.56449532329816,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0.441463099414651,0,0.514703430895577,0,0,0,0,0.651616610620649,0,0,0,0.469634776943287,4.76409277611544,2.31492756288305,5.32711626256875,0,0,0.246217006087397,0,0,0,0,0,0,0,0,3.94130590316755,5.10680917276711,2.28060927094849,0.576479813667846,0.50496973370552,0.571481048629521,0.381988425558278,1.17217447210047,0,1.02827492703324,1.20137223137567,2.85826432630578,1.23344192779897,3.92364061949952,3.5202377194056,0.129271715757778,0,0.845302752556,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0,2.43247561282381,0,0,0,1.14861935834114,0,1.15825045334063,1.2328579353023,1.07436577943937,49.5416336451391,48.0755054892702,29.3253501808944,27.2087236913067,0.508189248444927,0,0.773288812777695,0,0,8.23907726341901,11.966458368161,5.8018171881045,0.613457458595699,0.500170521059677,0.542530047399471,0,0.178428988797162,0.157702415033935,0.468565659970853,1.20378439891088,0,2.0694614258501,0,0,0.173767228936166,0,0,42.180677329069,24.1599904916851,17.7167745953718,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0.355123450626254,0.492762936082855,0.519254429183621,0,0,0,0.184161977871793,0.229628896329213,0.728364672026868,0.393373244878272,0,0,0,0,0.105551628892876,0,0.340187410553031,2.59099099322567,0,0,0,0,0,0,0.219259876645935,0.522870902049801,0.256450125116389,0,0,1.33953315142039,1.55668090191184,1.56768049849117,0,0,0,1.7400729292582,1.23238893691716,0.767518373630648,1.51620229732984,0.966782203814463,0.435050081742686,0.596586391912706,4.45160178233687,0.165284915360978,0.192190067365106,0,0.10115778085555,0.464845549297286,0,0,0,0,0,0.18532421910392,0,2.60510858551767,1.2655176988749,0.190630193923825,0,0.42793898803392,0,0,0.179872457583315,0,0.235624804691373,0.202182481573316,0,0.421258456238981,0,0.73114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| ||
|short_description=p5@ADD3 | |||
}} | }} |
Latest revision as of 07:56, 16 September 2015
Short description: | p5@ADD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ADD3_5end |
Coexpression cluster: | C272_CD19_CD4_CD8_Whole_Peripheral_lymph_tonsil |
Association with transcript: | 32bp_to_ENST00000468345, ENST00000473669_5end |
EntrezGene: | ADD3 |
HGNC: | 245 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 9.38e-30 | 168 |
hematopoietic cell | 1.14e-29 | 177 |
lymphocyte | 2.05e-27 | 53 |
common lymphoid progenitor | 2.05e-27 | 53 |
hematopoietic oligopotent progenitor cell | 3.98e-27 | 161 |
hematopoietic multipotent progenitor cell | 3.98e-27 | 161 |
lymphoid lineage restricted progenitor cell | 9.78e-27 | 52 |
leukocyte | 6.29e-25 | 136 |
nongranular leukocyte | 1.91e-20 | 115 |
hematopoietic lineage restricted progenitor cell | 3.99e-17 | 120 |
mature alpha-beta T cell | 8.21e-16 | 18 |
alpha-beta T cell | 8.21e-16 | 18 |
immature T cell | 8.21e-16 | 18 |
mature T cell | 8.21e-16 | 18 |
immature alpha-beta T cell | 8.21e-16 | 18 |
T cell | 1.71e-14 | 25 |
pro-T cell | 1.71e-14 | 25 |
lymphocyte of B lineage | 4.01e-11 | 24 |
pro-B cell | 4.01e-11 | 24 |
CD8-positive, alpha-beta T cell | 2.96e-10 | 11 |
B cell | 1.78e-09 | 14 |
myeloid cell | 6.66e-07 | 108 |
common myeloid progenitor | 6.66e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
blood | 4.14e-13 | 15 |
haemolymphatic fluid | 4.14e-13 | 15 |
organism substance | 4.14e-13 | 15 |
hemolymphoid system | 1.52e-08 | 108 |
hematopoietic system | 1.70e-07 | 98 |
blood island | 1.70e-07 | 98 |