FFCP PHASE1:Hg19::chr10:3828347..3828359,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:3828347..3828359,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:3828347..3828359,+ | |||
|id=chr10:3828347..3828359,+ | |||
|ontology_enrichment_celltype=CL:0002057!6.35e-47!42;CL:0000860!5.14e-43!45;CL:0002087!1.19e-35!119;CL:0000738!1.05e-34!140;CL:0002031!1.49e-33!124;CL:0002009!1.17e-27!65;CL:0002194!7.25e-27!63;CL:0000576!7.25e-27!63;CL:0000040!7.25e-27!63;CL:0000559!7.25e-27!63;CL:0000766!1.57e-26!76;CL:0000839!2.91e-26!70;CL:0000037!5.24e-26!172;CL:0000566!5.24e-26!172;CL:0000557!5.67e-26!71;CL:0000988!1.15e-24!182;CL:0002032!2.33e-24!165;CL:0000837!2.33e-24!165;CL:0002393!1.47e-16!9;CL:0002397!1.47e-16!9;CL:0000763!1.64e-16!112;CL:0000049!1.64e-16!112;CL:0000624!1.54e-10!6;CL:0002320!1.72e-10!365;CL:0000134!5.81e-10!358;CL:0000219!1.66e-08!390;CL:0000791!2.04e-08!18;CL:0000789!2.04e-08!18;CL:0002420!2.04e-08!18;CL:0002419!2.04e-08!18;CL:0000790!2.04e-08!18;CL:0000838!6.88e-08!52;CL:0000542!1.19e-07!53;CL:0000051!1.19e-07!53;CL:0000723!4.73e-07!436;CL:0000034!5.15e-07!444;CL:0000048!5.89e-07!430;CL:0000623!7.92e-07!3;CL:0000825!7.92e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.25e-56;33!CL:0002057;1.25e-56;33!CL:0000576;2.41e-41;48!CL:0000473;8.72e-41;39!CL:0000234;8.72e-41;39!CL:0000766;2.82e-24;69!CL:0002393;4.32e-21;6!CL:0002397;4.32e-21;6!CL:0002087;1.31e-12;104!CL:0000763;3.61e-11;100!CL:0000738;5.07e-09;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.12e-77,42;CL:0002057,2.12e-77,42;CL:0000473,2.69e-67,48;CL:0000234,2.69e-67,48;CL:0002009,1.43e-56,61;CL:0002194,3.83e-53,59;CL:0000576,3.83e-53,59;CL:0000040,3.83e-53,59;CL:0000559,3.83e-53,59;CL:0000557,2.90e-51,67;CL:0000766,2.10e-47,72;CL:0000839,3.17e-47,66;CL:0000763,1.18e-33,108;CL:0000049,1.18e-33,108;CL:0002031,6.53e-33,120;CL:0002087,2.03e-31,115;CL:0000738,2.75e-31,136;CL:0002032,7.36e-26,161;CL:0000837,7.36e-26,161;CL:0000037,1.26e-24,168;CL:0000988,3.50e-23,177;CL:0002393,3.96e-14,9;CL:0002397,3.96e-14,9;CL:0000134,1.39e-09,354;CL:0002320,2.57e-09,361;CL:0000219,2.26e-08,386;CL:0000048,3.24e-07,427;CL:0000723,4.68e-07,433;CL:0000034,7.54e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;8.21e-54;42!CL:0000049;2.07e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!8.23e-22!80;UBERON:0001474!1.57e-19!86;UBERON:0002390!2.45e-19!102;UBERON:0003061!2.45e-19!102;UBERON:0002193!1.49e-18!112;UBERON:0004765!4.67e-15!101;UBERON:0001434!4.67e-15!101;UBERON:0002405!1.31e-14!115;UBERON:0002384!3.36e-10!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.50e-45,76;UBERON:0001474,2.39e-41,82;UBERON:0004765,2.16e-37,90;UBERON:0002405,4.41e-36,93;UBERON:0002390,4.49e-34,98;UBERON:0003061,4.49e-34,98;UBERON:0001434,2.51e-33,100;UBERON:0002193,1.31e-30,108;UBERON:0002204,1.54e-18,167;UBERON:0003081,1.38e-14,203;UBERON:0002384,5.96e-09,371;UBERON:0000926,5.08e-08,315;UBERON:0004120,5.08e-08,315;UBERON:0006603,5.08e-08,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0.0764134057479513,0.0821005894499457,0,1.18009283054671,0.383829398097213,0.154816123316076,0,0,0,0,0,0,3.32397245119126,3.20871115952227,2.17010870715852,0,0,0,0,0.377875943688809,0,1.16214518452842,0,1.54853185447552,2.01384674625505,0.512321413058201,2.60130452877444,2.75796544589295,3.87290810150296,2.70852973188684,0,0,0.224723484445085,6.12167784741805,2.56743221660875,7.03270838378945,0.329851300186716,0.199463657621632,0,1.45104619314292,0.56738522469114,1.86846674698672,1.00499466102697,1.0429658368404,1.3031330682307,0.605399502633369,3.31449872388808,3.48108626184973,0.211255286311942,0.637812899895131,1.67726916406701,0.44931452458598,0,0,0.285012743741249,0.39783335439818,0.547992461293902,0,0.546138611262131,0,0,0,0.574752439954483,0,0,0.569212969109448,0.587237189370939,0,0,0,0.263384084775077,0.196709770113833,0.786021525498329,0.205601498999509,0,0.32592226663359,0.473447805734733,0,0.111410456885174,0.883817722424512,0.221533894583621,0.270803863765016,0,0.260118695119756,0,0.552700035571697,0,0.444859689486181,0.535081656179426,0,0,0.383220493601921,0.68725489096526,0.506039384039006,0,0,0,0,0,0,0.236777252044017,0,0.604820229674197,2.40696176205157,0.724122019413995,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.529636723252875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0.862510299438069,1.28343036279748,0,0,0,0.167516265334349,0,0,0,0,0,0,0.271265023699736,0,0,0.157702415033935,0,0,0,0,0.664225598535437,0,0.173767228936166,0,0.343143423810856,0.206768026122887,0.431428401637234,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638002319463839,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,2.32140586367385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 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| ||
|short_description=p@chr10:3828347..3828359,+ | |||
}} | }} |
Latest revision as of 13:33, 23 July 2015
Short description: | p@chr10:3828347..3828359, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:3828347..3828359, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.12e-77 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.12e-77 | 42 |
defensive cell | 2.69e-67 | 48 |
phagocyte | 2.69e-67 | 48 |
macrophage dendritic cell progenitor | 1.43e-56 | 61 |
monopoietic cell | 3.83e-53 | 59 |
monocyte | 3.83e-53 | 59 |
monoblast | 3.83e-53 | 59 |
promonocyte | 3.83e-53 | 59 |
granulocyte monocyte progenitor cell | 2.90e-51 | 67 |
myeloid leukocyte | 2.10e-47 | 72 |
myeloid lineage restricted progenitor cell | 3.17e-47 | 66 |
myeloid cell | 1.18e-33 | 108 |
common myeloid progenitor | 1.18e-33 | 108 |
hematopoietic lineage restricted progenitor cell | 6.53e-33 | 120 |
nongranular leukocyte | 2.03e-31 | 115 |
leukocyte | 2.75e-31 | 136 |
hematopoietic oligopotent progenitor cell | 7.36e-26 | 161 |
hematopoietic multipotent progenitor cell | 7.36e-26 | 161 |
hematopoietic stem cell | 1.26e-24 | 168 |
hematopoietic cell | 3.50e-23 | 177 |
intermediate monocyte | 3.96e-14 | 9 |
CD14-positive, CD16-positive monocyte | 3.96e-14 | 9 |
mesenchymal cell | 1.39e-09 | 354 |
connective tissue cell | 2.57e-09 | 361 |
motile cell | 2.26e-08 | 386 |
multi fate stem cell | 3.24e-07 | 427 |
somatic stem cell | 4.68e-07 | 433 |
stem cell | 7.54e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.50e-45 | 76 |
bone element | 2.39e-41 | 82 |
skeletal element | 2.16e-37 | 90 |
immune system | 4.41e-36 | 93 |
hematopoietic system | 4.49e-34 | 98 |
blood island | 4.49e-34 | 98 |
skeletal system | 2.51e-33 | 100 |
hemolymphoid system | 1.31e-30 | 108 |
musculoskeletal system | 1.54e-18 | 167 |
lateral plate mesoderm | 1.38e-14 | 203 |
connective tissue | 5.96e-09 | 371 |
mesoderm | 5.08e-08 | 315 |
mesoderm-derived structure | 5.08e-08 | 315 |
presumptive mesoderm | 5.08e-08 | 315 |