FFCP PHASE1:Hg19::chr10:49842649..49842666,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr10:49842649..49842666,+ to FFCP PHASE1:Hg19::chr10:49842649..49842666,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:49842649..49842666,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:49842649..49842666,+ | |||
|id=chr10:49842649..49842666,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.38e-76!42;CL:0002194!5.60e-73!63;CL:0000576!5.60e-73!63;CL:0000040!5.60e-73!63;CL:0000559!5.60e-73!63;CL:0000860!8.14e-71!45;CL:0002009!2.06e-70!65;CL:0000766!4.83e-68!76;CL:0000839!8.01e-68!70;CL:0000557!1.02e-66!71;CL:0000763!4.17e-49!112;CL:0000049!4.17e-49!112;CL:0002087!2.10e-47!119;CL:0000738!3.26e-44!140;CL:0002031!9.57e-43!124;CL:0000988!7.23e-39!182;CL:0000037!1.68e-38!172;CL:0000566!1.68e-38!172;CL:0002032!3.93e-37!165;CL:0000837!3.93e-37!165;CL:0002320!3.31e-20!365;CL:0000134!5.46e-19!358;CL:0000219!6.92e-17!390;CL:0000048!5.82e-15!430;CL:0000723!1.50e-14!436;CL:0000034!5.11e-14!444;CL:0002619!8.32e-09!3;CL:0002371!2.00e-08!591;CL:0000144!4.01e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.80e-132;33!CL:0002057;9.80e-132;33!CL:0000473;2.10e-97;39!CL:0000234;2.10e-97;39!CL:0000576;1.17e-79;48!CL:0000766;9.17e-45;69!CL:0000763;1.73e-21;100!CL:0002087;8.17e-20;104!CL:0000738;2.68e-13;136!CL:0002393;2.34e-08;6!CL:0002397;2.34e-08;6!CL:0000988;4.42e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.64e-136,42;CL:0002057,2.64e-136,42;CL:0000473,8.27e-126,48;CL:0000234,8.27e-126,48;CL:0002194,2.00e-105,59;CL:0000576,2.00e-105,59;CL:0000040,2.00e-105,59;CL:0000559,2.00e-105,59;CL:0002009,7.91e-102,61;CL:0000839,9.01e-94,66;CL:0000557,2.66e-92,67;CL:0000766,1.00e-90,72;CL:0000763,1.05e-58,108;CL:0000049,1.05e-58,108;CL:0002087,9.56e-55,115;CL:0002031,3.81e-49,120;CL:0000738,3.18e-48,136;CL:0000037,6.90e-38,168;CL:0002032,1.99e-37,161;CL:0000837,1.99e-37,161;CL:0000988,1.20e-35,177;CL:0000134,1.33e-14,354;CL:0002320,3.44e-14,361;CL:0000219,9.76e-13,386;CL:0000048,5.87e-11,427;CL:0000723,1.03e-10,433;CL:0000034,2.15e-10,441 | |||
|ontology_enrichment_development_v019=CL:0002057;3.36e-100;42!CL:0000049;6.74e-17;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.46e-58!80;UBERON:0001474!3.55e-53!86;UBERON:0002390!8.40e-48!102;UBERON:0003061!8.40e-48!102;UBERON:0004765!6.84e-46!101;UBERON:0001434!6.84e-46!101;UBERON:0002193!1.04e-44!112;UBERON:0002405!5.50e-39!115;UBERON:0002204!5.15e-26!167;UBERON:0003081!1.06e-20!216;UBERON:0002384!2.85e-19!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.56e-81,76;UBERON:0001474,1.66e-74,82;UBERON:0004765,2.07e-67,90;UBERON:0002390,3.18e-65,98;UBERON:0003061,3.18e-65,98;UBERON:0002405,4.63e-65,93;UBERON:0001434,4.05e-60,100;UBERON:0002193,1.15e-58,108;UBERON:0002204,1.28e-33,167;UBERON:0003081,2.25e-28,203;UBERON:0000926,5.43e-16,315;UBERON:0004120,5.43e-16,315;UBERON:0006603,5.43e-16,315;UBERON:0002384,1.26e-13,371 | |||
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| ||
|short_description=p@chr10:49842649..49842666,+ | |||
}} | }} |
Latest revision as of 13:57, 23 July 2015
Short description: | p@chr10:49842649..49842666, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:49842649..49842666, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.64e-136 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.64e-136 | 42 |
defensive cell | 8.27e-126 | 48 |
phagocyte | 8.27e-126 | 48 |
monopoietic cell | 2.00e-105 | 59 |
monocyte | 2.00e-105 | 59 |
monoblast | 2.00e-105 | 59 |
promonocyte | 2.00e-105 | 59 |
macrophage dendritic cell progenitor | 7.91e-102 | 61 |
myeloid lineage restricted progenitor cell | 9.01e-94 | 66 |
granulocyte monocyte progenitor cell | 2.66e-92 | 67 |
myeloid leukocyte | 1.00e-90 | 72 |
myeloid cell | 1.05e-58 | 108 |
common myeloid progenitor | 1.05e-58 | 108 |
nongranular leukocyte | 9.56e-55 | 115 |
hematopoietic lineage restricted progenitor cell | 3.81e-49 | 120 |
leukocyte | 3.18e-48 | 136 |
hematopoietic stem cell | 6.90e-38 | 168 |
hematopoietic oligopotent progenitor cell | 1.99e-37 | 161 |
hematopoietic multipotent progenitor cell | 1.99e-37 | 161 |
hematopoietic cell | 1.20e-35 | 177 |
mesenchymal cell | 1.33e-14 | 354 |
connective tissue cell | 3.44e-14 | 361 |
motile cell | 9.76e-13 | 386 |
multi fate stem cell | 5.87e-11 | 427 |
somatic stem cell | 1.03e-10 | 433 |
stem cell | 2.15e-10 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.56e-81 | 76 |
bone element | 1.66e-74 | 82 |
skeletal element | 2.07e-67 | 90 |
hematopoietic system | 3.18e-65 | 98 |
blood island | 3.18e-65 | 98 |
immune system | 4.63e-65 | 93 |
skeletal system | 4.05e-60 | 100 |
hemolymphoid system | 1.15e-58 | 108 |
musculoskeletal system | 1.28e-33 | 167 |
lateral plate mesoderm | 2.25e-28 | 203 |
mesoderm | 5.43e-16 | 315 |
mesoderm-derived structure | 5.43e-16 | 315 |
presumptive mesoderm | 5.43e-16 | 315 |
connective tissue | 1.26e-13 | 371 |