FFCP PHASE1:Hg19::chr10:97050816..97050825,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:97050816..97050825,- to FFCP PHASE1:Hg19::chr10:97050816..97050825,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9124 | |EntrezGene=9124 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2067 | |HGNC=2067 | ||
|TSSclassifier=strong | |||
|UniProt=O00151 | |UniProt=O00151 | ||
|association_with_transcript=-35bp_to_ENST00000329399,NM_020992,uc001kkh.2,uc001kki.2,uc001kkj.1,uc009xuv.2_5end | |||
|cluster_id=chr10:97050816..97050825,- | |||
|coexpression_cluster_id=C2083 | |||
|description=CAGE_peak_4_at_PDLIM1_5end | |||
|id=chr10:97050816..97050825,- | |||
|ontology_enrichment_celltype=CL:0002321!2.86e-22!248;CL:0000220!1.04e-21!246;CL:0000066!1.22e-21!254;CL:0000222!1.49e-15!119;CL:0000548!1.50e-13!679;CL:0000004!1.50e-13!679;CL:0000255!1.50e-13!679;CL:0000012!2.63e-13!682;CL:0000076!4.15e-13!62;CL:0000213!2.12e-11!57;CL:0000215!2.12e-11!57;CL:0002139!3.09e-11!24;CL:0000115!3.37e-11!35;CL:0002078!5.61e-11!44;CL:0000144!2.20e-10!625;CL:0000071!2.49e-09!18;CL:0002546!2.49e-09!18;CL:0002371!8.86e-09!591;CL:0000055!1.28e-08!180;CL:1000497!2.58e-08!18;CL:0002518!2.58e-08!18;CL:1000449!9.37e-08!16;CL:0000057!2.38e-07!75;CL:0000183!3.05e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.08e-11;24!CL:0000115;3.71e-10;36!CL:0000071;2.11e-09;18!CL:1000497;5.42e-08;17!CL:0002518;5.42e-08;17!CL:0002078;1.23e-07;45!CL:0000213;1.46e-07;58!CL:0000215;1.46e-07;58!CL:1000449;2.03e-07;15!CL:0000076;4.50e-07;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,4.34e-23,250;CL:0000066,2.42e-21,253;CL:0000222,3.01e-16,121;CL:0000076,1.69e-13,63;CL:0000115,3.82e-12,36;CL:0000213,4.57e-12,58;CL:0000215,4.57e-12,58;CL:0002078,1.15e-11,45;CL:0002139,2.17e-11,24;CL:0000071,1.88e-09,18;CL:0002546,1.88e-09,18;CL:1000497,5.09e-08,17;CL:0002518,5.09e-08,17;CL:0000057,1.87e-07,76;CL:1000449,1.89e-07,15 | |||
|ontology_enrichment_development_v019=CL:0002546;2.11e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!1.13e-17!118;UBERON:0002049!1.20e-16!79;UBERON:0007798!1.20e-16!79;UBERON:0004872!1.46e-14!84;UBERON:0001009!3.48e-14!113;UBERON:0000055!4.27e-14!69;UBERON:0004535!1.05e-13!110;UBERON:0003104!1.37e-12!238;UBERON:0009142!1.37e-12!238;UBERON:0003102!4.15e-12!95;UBERON:0005256!9.06e-12!143;UBERON:0001981!4.34e-11!60;UBERON:0007500!4.34e-11!60;UBERON:0004537!4.34e-11!60;UBERON:0006965!4.34e-11!60;UBERON:0000490!5.57e-11!138;UBERON:0002100!9.01e-11!216;UBERON:0000477!3.42e-10!286;UBERON:0004119!2.35e-09!169;UBERON:0000925!2.35e-09!169;UBERON:0006595!2.35e-09!169;UBERON:0001986!2.49e-09!18;UBERON:0004638!2.49e-09!18;UBERON:0004852!2.49e-09!18;UBERON:0000487!3.37e-09!22;UBERON:0006914!4.35e-08!25;UBERON:0003103!5.06e-08!69;UBERON:0000481!6.83e-08!347;UBERON:0004211!9.37e-08!16;UBERON:0001285!9.37e-08!16;UBERON:0007684!9.37e-08!16;UBERON:0003220!9.37e-08!16;UBERON:0004208!9.37e-08!16;UBERON:0000119!9.57e-08!312;UBERON:0004111!9.58e-08!241;UBERON:0009569!1.04e-07!113;UBERON:0003064!1.37e-07!37;UBERON:0006555!1.72e-07!17;UBERON:0005103!1.72e-07!17;UBERON:0000083!1.72e-07!17;UBERON:0009201!1.72e-07!17;UBERON:0004819!1.72e-07!17;UBERON:0006553!1.72e-07!17;UBERON:0003074!1.72e-07!17;UBERON:0003060!1.72e-07!17;UBERON:0001008!1.73e-07!45;UBERON:0003887!2.00e-07!21;UBERON:0001007!2.16e-07!155;UBERON:0001555!2.16e-07!155;UBERON:0007026!2.16e-07!155;UBERON:0000353!2.90e-07!17;UBERON:0000483!3.17e-07!309;UBERON:0006554!3.36e-07!44;UBERON:0000080!4.85e-07!18;UBERON:0002120!4.85e-07!18;UBERON:0004875!4.85e-07!18;UBERON:0005721!4.85e-07!18;UBERON:0005754!4.85e-07!18;UBERON:0007297!4.85e-07!18;UBERON:0000475!6.30e-07!365;UBERON:0004876!6.42e-07!20;UBERON:0001637!9.19e-07!42;UBERON:0003509!9.19e-07!42;UBERON:0004572!9.19e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.11e-09;18!UBERON:0001986;2.11e-09;18!UBERON:0004852;2.11e-09;18!UBERON:0000490;2.83e-09;33!UBERON:0000487;3.42e-09;22!UBERON:0003914;4.21e-08;74!UBERON:0006914;4.75e-08;25!UBERON:0002049;7.17e-08;75!UBERON:0007798;7.17e-08;75!UBERON:0006555;2.03e-07;15!UBERON:0004819;2.03e-07;15!UBERON:0001285;2.03e-07;15!UBERON:0007684;2.03e-07;15!UBERON:0000055;3.94e-07;65!UBERON:0007500;5.66e-07;56!UBERON:0001981;5.66e-07;56!UBERON:0004537;5.66e-07;56!UBERON:0000353;6.91e-07;15 | |||
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| ||
|short_description=p4@PDLIM1 | |||
}} | }} |
Latest revision as of 03:02, 20 September 2015
Short description: | p4@PDLIM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PDLIM1_5end |
Coexpression cluster: | C2083_Placental_acantholytic_Amniotic_Endothelial_Tracheal_Urothelial_Fibroblast |
Association with transcript: | -35bp_to_ENST00000329399, NM_020992, uc001kkh.2, uc001kki.2, uc001kkj.1, uc009xuv.2_5end |
EntrezGene: | PDLIM1 |
HGNC: | 2067 |
UniProt: | O00151 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 4.34e-23 | 250 |
epithelial cell | 2.42e-21 | 253 |
mesodermal cell | 3.01e-16 | 121 |
squamous epithelial cell | 1.69e-13 | 63 |
endothelial cell | 3.82e-12 | 36 |
lining cell | 4.57e-12 | 58 |
barrier cell | 4.57e-12 | 58 |
meso-epithelial cell | 1.15e-11 | 45 |
endothelial cell of vascular tree | 2.17e-11 | 24 |
blood vessel endothelial cell | 1.88e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.88e-09 | 18 |
kidney cell | 5.09e-08 | 17 |
kidney epithelial cell | 5.09e-08 | 17 |
fibroblast | 1.87e-07 | 76 |
epithelial cell of nephron | 1.89e-07 | 15 |