FFCP PHASE1:Hg19::chr11:18343669..18343721,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:18343669..18343721,- to FFCP PHASE1:Hg19::chr11:18343669..18343721,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11234 | |EntrezGene=11234 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17022 | |HGNC=17022 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UPZ3 | |UniProt=Q9UPZ3 | ||
|association_with_transcript=0bp_to_ENST00000349215,ENST00000396253,ENST00000438420,NM_007216,NM_181507,NM_181508,uc001mod.1,uc001moe.1,uc001mof.1,uc001mog.1_5end | |||
|cluster_id=chr11:18343669..18343721,- | |||
|description=CAGE_peak_1_at_HPS5_5end | |||
|id=chr11:18343669..18343721,- | |||
|ontology_enrichment_celltype=CL:0000738!7.77e-37!140;CL:0002087!1.26e-31!119;CL:0000037!2.00e-31!172;CL:0000566!2.00e-31!172;CL:0002032!3.11e-31!165;CL:0000837!3.11e-31!165;CL:0002031!3.55e-31!124;CL:0000766!3.18e-29!76;CL:0002009!4.00e-28!65;CL:0000988!9.79e-28!182;CL:0002194!8.24e-27!63;CL:0000576!8.24e-27!63;CL:0000040!8.24e-27!63;CL:0000559!8.24e-27!63;CL:0000557!2.76e-26!71;CL:0000839!8.93e-25!70;CL:0000763!9.02e-24!112;CL:0000049!9.02e-24!112;CL:0002057!1.24e-22!42;CL:0000860!2.31e-20!45;CL:0000134!7.59e-16!358;CL:0000219!7.44e-15!390;CL:0002320!7.38e-14!365;CL:0000063!9.45e-13!578;CL:0000723!3.37e-11!436;CL:0000003!3.42e-11!722;CL:0000048!4.66e-11!430;CL:0000034!6.37e-11!444;CL:0000012!1.59e-08!682;CL:0000548!2.40e-08!679;CL:0000004!2.40e-08!679;CL:0000255!2.40e-08!679;CL:0000144!2.76e-07!625;CL:0000542!3.04e-07!53;CL:0000051!3.04e-07!53;CL:0000838!6.46e-07!52;CL:0000236!7.72e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.75e-18;33!CL:0002057;6.75e-18;33!CL:0000473;1.21e-17;39!CL:0000234;1.21e-17;39!CL:0000576;5.46e-16;48!CL:0000766;1.40e-13;69!CL:0000738;2.65e-09;136!CL:0002087;2.94e-09;104!CL:0000763;2.51e-07;100!CL:0000945;9.66e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.83e-38,136;CL:0002087,7.21e-33,115;CL:0002031,2.37e-32,120;CL:0000037,2.81e-32,168;CL:0002032,4.07e-32,161;CL:0000837,4.07e-32,161;CL:0000766,5.01e-31,72;CL:0002009,3.73e-30,61;CL:0000988,3.16e-29,177;CL:0002194,8.20e-29,59;CL:0000576,8.20e-29,59;CL:0000040,8.20e-29,59;CL:0000559,8.20e-29,59;CL:0000557,4.96e-28,67;CL:0000839,1.89e-26,66;CL:0000473,9.94e-26,48;CL:0000234,9.94e-26,48;CL:0000763,8.61e-25,108;CL:0000049,8.61e-25,108;CL:0000860,1.24e-22,42;CL:0002057,1.24e-22,42;CL:0000134,1.11e-16,354;CL:0000219,1.24e-15,386;CL:0002320,1.26e-14,361;CL:0000723,1.41e-11,433;CL:0000048,1.96e-11,427;CL:0000034,2.72e-11,441;CL:0000542,3.04e-07,53;CL:0000051,3.04e-07,53;CL:0000838,6.46e-07,52;CL:0000236,7.72e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002057;9.04e-17;42!CL:0000049;2.93e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.29e-23!102;UBERON:0003061!3.29e-23!102;UBERON:0002371!3.60e-22!80;UBERON:0002193!1.20e-19!112;UBERON:0001474!5.00e-19!86;UBERON:0004765!3.05e-16!101;UBERON:0001434!3.05e-16!101;UBERON:0002405!3.89e-16!115;UBERON:0002384!4.67e-13!375;UBERON:0002204!2.67e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.65e-24,98;UBERON:0003061,2.65e-24,98;UBERON:0002371,1.70e-23,76;UBERON:0002193,1.63e-20,108;UBERON:0002405,1.95e-20,93;UBERON:0001474,4.22e-20,82;UBERON:0004765,1.03e-17,90;UBERON:0001434,2.28e-15,100;UBERON:0002384,8.62e-14,371;UBERON:0003081,9.90e-07,203 | |||
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| ||
|short_description=p1@HPS5 | |||
}} | }} |
Latest revision as of 02:24, 17 September 2015
Short description: | p1@HPS5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HPS5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000349215, ENST00000396253, ENST00000438420, NM_007216, NM_181507, NM_181508, uc001mod.1, uc001moe.1, uc001mof.1, uc001mog.1_5end |
EntrezGene: | HPS5 |
HGNC: | 17022 |
UniProt: | Q9UPZ3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.65e-24 | 98 |
blood island | 2.65e-24 | 98 |
bone marrow | 1.70e-23 | 76 |
hemolymphoid system | 1.63e-20 | 108 |
immune system | 1.95e-20 | 93 |
bone element | 4.22e-20 | 82 |
skeletal element | 1.03e-17 | 90 |
skeletal system | 2.28e-15 | 100 |
connective tissue | 8.62e-14 | 371 |
lateral plate mesoderm | 9.90e-07 | 203 |