FFCP PHASE1:Hg19::chr11:60719213..60719243,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:60719213..60719243,- to FFCP PHASE1:Hg19::chr11:60719213..60719243,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51296 | |EntrezGene=51296 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18068 | |HGNC=18068 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IY34 | |UniProt=Q8IY34 | ||
|association_with_transcript=13bp_to_ENST00000227880,NM_016582,NR_027391,uc001nqn.2,uc001nqo.2_5end | |||
|cluster_id=chr11:60719213..60719243,- | |||
|description=CAGE_peak_6_at_SLC15A3_5end | |||
|id=chr11:60719213..60719243,- | |||
|ontology_enrichment_celltype=CL:0000766!4.86e-41!76;CL:0002194!1.22e-36!63;CL:0000576!1.22e-36!63;CL:0000040!1.22e-36!63;CL:0000559!1.22e-36!63;CL:0002009!7.36e-35!65;CL:0002057!2.37e-32!42;CL:0000839!3.58e-32!70;CL:0000557!2.02e-31!71;CL:0000860!4.27e-29!45;CL:0000738!3.59e-27!140;CL:0000763!3.90e-25!112;CL:0000049!3.90e-25!112;CL:0002087!6.66e-22!119;CL:0000037!2.26e-18!172;CL:0000566!2.26e-18!172;CL:0002031!1.65e-17!124;CL:0002032!2.51e-17!165;CL:0000837!2.51e-17!165;CL:0000988!1.60e-16!182;CL:0000094!7.52e-09!8;CL:0002393!9.18e-09!9;CL:0002397!9.18e-09!9;CL:0000134!4.99e-08!358;CL:0002320!2.45e-07!365;CL:0000081!4.36e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000473;4.66e-34;39!CL:0000234;4.66e-34;39!CL:0000576;1.45e-25;48!CL:0000860;3.06e-25;33!CL:0002057;3.06e-25;33!CL:0000766;6.06e-25;69!CL:0000235;8.38e-23;6!CL:0002393;3.62e-15;6!CL:0002397;3.62e-15;6!CL:0000763;4.47e-13;100!CL:0002619;4.00e-12;3!CL:0000094;7.72e-12;8!CL:0000738;5.69e-09;136!CL:0000771;9.68e-09;2!CL:0002087;1.38e-08;104!CL:0000081;1.65e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.89e-69,72;CL:0002194,8.98e-64,59;CL:0000576,8.98e-64,59;CL:0000040,8.98e-64,59;CL:0000559,8.98e-64,59;CL:0002009,1.94e-61,61;CL:0000839,3.29e-56,66;CL:0000557,2.95e-55,67;CL:0000473,2.28e-53,48;CL:0000234,2.28e-53,48;CL:0000763,4.24e-43,108;CL:0000049,4.24e-43,108;CL:0000860,1.80e-36,42;CL:0002057,1.80e-36,42;CL:0000738,3.06e-34,136;CL:0002087,9.45e-31,115;CL:0002031,2.68e-27,120;CL:0000037,6.14e-26,168;CL:0002032,6.67e-26,161;CL:0000837,6.67e-26,161;CL:0000988,3.84e-24,177;CL:0000235,6.62e-23,6;CL:0002619,3.45e-12,3;CL:0000094,9.17e-12,8;CL:0002393,8.45e-10,9;CL:0002397,8.45e-10,9;CL:0000771,9.16e-09,2;CL:0000081,1.86e-08,11;CL:0000134,4.23e-08,354;CL:0002320,9.12e-08,361;CL:0000034,6.96e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.56e-27;42!CL:0000049;1.61e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.22e-32!102;UBERON:0003061!9.22e-32!102;UBERON:0002193!9.43e-30!112;UBERON:0002371!6.62e-27!80;UBERON:0001474!1.38e-23!86;UBERON:0002405!6.44e-23!115;UBERON:0004765!6.17e-19!101;UBERON:0001434!6.17e-19!101;UBERON:0003081!1.06e-12!216;UBERON:0002204!4.40e-10!167;UBERON:0002384!3.94e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.63e-48,76;UBERON:0002390,1.06e-47,98;UBERON:0003061,1.06e-47,98;UBERON:0001474,1.03e-43,82;UBERON:0002405,1.36e-42,93;UBERON:0002193,1.86e-42,108;UBERON:0004765,4.08e-39,90;UBERON:0001434,2.15e-34,100;UBERON:0002204,2.36e-21,167;UBERON:0003081,6.93e-21,203;UBERON:0000926,1.14e-11,315;UBERON:0004120,1.14e-11,315;UBERON:0006603,1.14e-11,315;UBERON:0002384,5.98e-08,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458480434487708,0.821005894499457,0.550975469195755,0.393364276848904,1.15148819429164,0.928896739896456,0,0,0,0,0,0,3.32397245119126,3.81034450193269,2.17010870715852,2.91090116511902,3.56283032620878,3.34848237924443,0.872389432677388,0.377875943688809,0.242584061187816,2.78914844286822,2.87817521615278,1.54853185447552,1.7261543539329,0.512321413058201,0.709446689665756,2.41321976515633,0,1.35426486594342,1.50593871634084,0.818718450173537,1.34834090667051,2.44867113896722,1.28371610830437,2.55734850319616,0.329851300186716,0.199463657621632,0.852449501065388,4.93355705668593,3.40431134814684,5.60540024096017,0.75374599577023,0,0.65156653411535,3.02699751316684,2.94622108790052,1.89877432464531,0.633765858935825,1.06302149982522,1.04829322754188,0.112328631146495,0.150176892841506,0.64290234678832,0.285012743741249,0.59675003159727,0.182664153764634,0,0,0,0,0,0,0.661044872784862,0,0,0,0.382273228125229,0,2.24203425192614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04535523804977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.458426764241994,0,0,7.14004266040303,5.57215159357655,9.04114131528283,0.476981248610684,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,2.63560834872127,7.75560528296651,0,0,0.12663051166458,0.132409180813219,0,0.354668382198357,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0.989067717114227,0,0.718618141816238,0,0,0,0,0,0.901428353439581,0,0.179389635688862,0.213557388818567,0.211931901159562,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0.169560592310488,0.193260853163297,0,0,1.34171076742555,0.265059536642971,0.464775771478074,0.829288440122964,0.504641701751257,0.36497735907583,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0.325808305310325,0,0,0.115930404975077,0,0,0,0,0,0,1.72351904261178,9.36017060556951,8.9178697373237,0,0,0,0,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,3.64871341923571,2.00902836572851,12.6500363689819,0.239624855491583,0,0,0.144781306667579,0,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,4.49404214368309,11.966458368161,0.414415513436035,0,0,0,0.207970861530807,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,1.06727557803444,0,0,0,0,0,0,0,0,0,0,0.462629081407967,0.177561725313127,0.164254312027618,0.519254429183621,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0.192190067365106,0.127612712494584,0,0,0,0,1.23213432070436,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,3.41198885483798,0,0,0,0,0,0,0.876901770507525,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,1.52927441428475,0,0.238231775457789,0.411362273086194,1.94541993357815,0.540031437238115,0.79312517629427,0,0,0,0.371606350251437,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,1.61158997199083,0,0,0,0,0.296964680832639,0.307160702099232,0,0.422008249231538,0,0,0,0,0,0,0,0.246169610922139,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0.153900517007594,0,0,0.0897576444097721,0.108647371922008,1.27600463892768,0.274792780205587,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.678923115418936,0,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.472091293214983,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,1.32506888912221,0,0,0,0,0.747511887973863,0,0.414239055347196,0.496166021811951,0,0.243585196761792,1.91502377331055,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0.889811221596536,0.228840068396924,0,0.15543720058278,0.147855149989634,0,0,0,0.414706207840855,0,0.521745061811734,0.150257608997218,0,0.406870733204662,0,0,0,0,0,0.343395705182793,0,0,0.385239660814607,0.214441591374926,0.521988583930423,0,0.231522474323834,1.46842022703881,0,0.617602894321944,0,0,0,0.168942440653073,0,0,0.303859956177382,0.138258436151731,0.389720617678777,0.664324201566815,0.654261577023377,0.655219697692825,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0.918736432059601,0,0,0,0,0,0.0691572524642179,0,0,0,0,0.366857197043358,0,0,0,0,1.20336525358812,0,0,0,0,0,0.135075169236789,0,0,0.0634158101939068,0,0,0,0,0.127762427639595,0,0,0,0,0.620916591138472,0.806637912890455,0,0,0.131545547125698,0,0,0.235479278551542,0,0,0,0,0,0.285906176706625,0,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0.603851374266694,0.308696632431779,0.218559560503957,0,0.24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| 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| ||
|short_description=p6@SLC15A3 | |||
}} | }} |
Latest revision as of 14:39, 18 September 2015
Short description: | p6@SLC15A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SLC15A3_5end |
Coexpression cluster: | NA |
Association with transcript: | 13bp_to_ENST00000227880, NM_016582, NR_027391, uc001nqn.2, uc001nqo.2_5end |
EntrezGene: | SLC15A3 |
HGNC: | 18068 |
UniProt: | Q8IY34 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.63e-48 | 76 |
hematopoietic system | 1.06e-47 | 98 |
blood island | 1.06e-47 | 98 |
bone element | 1.03e-43 | 82 |
immune system | 1.36e-42 | 93 |
hemolymphoid system | 1.86e-42 | 108 |
skeletal element | 4.08e-39 | 90 |
skeletal system | 2.15e-34 | 100 |
musculoskeletal system | 2.36e-21 | 167 |
lateral plate mesoderm | 6.93e-21 | 203 |
mesoderm | 1.14e-11 | 315 |
mesoderm-derived structure | 1.14e-11 | 315 |
presumptive mesoderm | 1.14e-11 | 315 |
connective tissue | 5.98e-08 | 371 |