FFCP PHASE1:Hg19::chr11:65222698..65222736,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:65222698..65222736,+ to FFCP PHASE1:Hg19::chr11:65222698..65222736,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=A6NDN8 | |UniProt=A6NDN8 | ||
|association_with_transcript=0bp_to_ENST00000309775_5end | |||
|cluster_id=chr11:65222698..65222736,+ | |||
|description=CAGE_peak_1_at_ENST00000309775_5end | |||
|id=chr11:65222698..65222736,+ | |||
|ontology_enrichment_celltype=CL:0000055!9.97e-11!180;CL:0000057!2.59e-09!75;CL:0002620!2.22e-08!23;CL:0000945!3.83e-07!24;CL:0000826!3.83e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.81e-08;23!CL:0000945;6.48e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.59e-09,76;CL:0002620,1.40e-08,23;CL:0000945,1.75e-07,24;CL:0000826,1.75e-07,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.29e-10!57;UBERON:0005068!9.29e-10!57;UBERON:0006241!9.29e-10!57;UBERON:0007135!9.29e-10!57;UBERON:0002346!2.42e-08!90;UBERON:0002616!3.88e-08!59;UBERON:0002780!3.00e-07!41;UBERON:0001890!3.00e-07!41;UBERON:0006240!3.00e-07!41;UBERON:0003075!4.91e-07!86;UBERON:0007284!4.91e-07!86;UBERON:0003080!5.09e-07!42 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.98e-10,56;UBERON:0005068,2.98e-10,56;UBERON:0006241,2.98e-10,56;UBERON:0007135,2.98e-10,56;UBERON:0000073,1.20e-09,53;UBERON:0002616,1.20e-09,53;UBERON:0002346,4.56e-09,86;UBERON:0010314,3.31e-08,132;UBERON:0003075,1.16e-07,82;UBERON:0007284,1.16e-07,82;UBERON:0002780,2.04e-07,41;UBERON:0001890,2.04e-07,41;UBERON:0003080,2.04e-07,41;UBERON:0006240,2.04e-07,41 | |||
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| ||
|short_description=p1@ENST00000309775 | |||
}} | }} |
Latest revision as of 08:33, 19 September 2015
Short description: | p1@ENST00000309775 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000309775_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000309775_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.59e-09 | 76 |
skin fibroblast | 1.40e-08 | 23 |
lymphocyte of B lineage | 1.75e-07 | 24 |
pro-B cell | 1.75e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
neural tube | 2.98e-10 | 56 |
neural rod | 2.98e-10 | 56 |
future spinal cord | 2.98e-10 | 56 |
neural keel | 2.98e-10 | 56 |
regional part of nervous system | 1.20e-09 | 53 |
regional part of brain | 1.20e-09 | 53 |
neurectoderm | 4.56e-09 | 86 |
structure with developmental contribution from neural crest | 3.31e-08 | 132 |
neural plate | 1.16e-07 | 82 |
presumptive neural plate | 1.16e-07 | 82 |
regional part of forebrain | 2.04e-07 | 41 |
forebrain | 2.04e-07 | 41 |
anterior neural tube | 2.04e-07 | 41 |
future forebrain | 2.04e-07 | 41 |