FFCP PHASE1:Hg19::chr12:26783639..26783652,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:26783639..26783652,- to FFCP PHASE1:Hg19::chr12:26783639..26783652,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3709 | |EntrezGene=3709 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6181 | |HGNC=6181 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000545902_5end | |||
|cluster_id=chr12:26783639..26783652,- | |||
|description=CAGE_peak_9_at_ITPR2_5end | |||
|id=chr12:26783639..26783652,- | |||
|ontology_enrichment_celltype=CL:0000222!1.52e-11!119;CL:0000077!9.22e-09!19;CL:0000220!8.28e-08!246;CL:0002321!1.28e-07!248;CL:0000213!1.74e-07!57;CL:0000215!1.74e-07!57;CL:0002594!9.87e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002588;4.11e-14;2!CL:0000349;1.25e-11;19!CL:0002569;3.42e-10;6!CL:0000342;5.57e-08;1!CL:0002565;5.57e-08;1!CL:0002568;5.57e-08;1!CL:0000319;1.79e-07;1!CL:0000306;2.35e-07;4!CL:0002222;2.35e-07;4!CL:0002224;2.35e-07;4!CL:0002594;3.12e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002588,3.74e-14,2;CL:0000349,9.95e-12,19;CL:0002569,2.63e-10,6;CL:0000342,4.89e-08,1;CL:0002565,4.89e-08,1;CL:0002568,5.22e-08,1;CL:0000319,1.91e-07,1;CL:0000306,2.80e-07,4;CL:0002222,2.80e-07,4;CL:0002224,2.80e-07,4;CL:0002594,3.83e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3030;1.79e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,1.91e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007625!6.48e-13!11;UBERON:0002049!4.50e-12!79;UBERON:0007798!4.50e-12!79;UBERON:0000119!3.74e-09!312;UBERON:0004535!6.02e-09!110;UBERON:0000019!6.06e-09!19;UBERON:0000047!6.06e-09!19;UBERON:0004088!6.06e-09!19;UBERON:0003072!6.06e-09!19;UBERON:0003071!6.06e-09!19;UBERON:0004128!6.06e-09!19;UBERON:0001009!1.95e-08!113;UBERON:0000970!2.47e-08!20;UBERON:0000055!2.82e-08!69;UBERON:0000483!4.42e-08!309;UBERON:0003914!6.15e-08!118;UBERON:0002104!8.76e-08!21;UBERON:0001456!8.76e-08!21;UBERON:0000490!2.85e-07!138;UBERON:0000488!3.94e-07!4;UBERON:0000477!4.13e-07!286;UBERON:0000020!7.79e-07!23;UBERON:0001310!9.87e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0010260;1.53e-17;9!UBERON:0002066;3.93e-12;5!UBERON:0003422;3.42e-10;6!UBERON:0007625;1.68e-09;11!UBERON:0002049;2.27e-09;75!UBERON:0007798;2.27e-09;75!UBERON:0000478;4.33e-09;24!UBERON:0003104;8.41e-09;7!UBERON:0009142;8.41e-09;7!UBERON:0002506;5.57e-08;1!UBERON:0001769;5.57e-08;1!UBERON:0001473;1.25e-07;8!UBERON:0004536;1.25e-07;8!UBERON:0006558;1.25e-07;8!UBERON:0001801;1.75e-07;14!UBERON:0000055;2.12e-07;65!UBERON:0010077;2.35e-07;4!UBERON:0005389;2.35e-07;4!UBERON:0000484;2.35e-07;4!UBERON:0000965;2.35e-07;4!UBERON:0001803;2.35e-07;4!UBERON:0000488;2.63e-07;4!UBERON:0001310;3.12e-07;4!UBERON:0001638;6.11e-07;9!UBERON:0003920;6.11e-07;9!UBERON:0004582;6.11e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010260,2.32e-17,9;UBERON:0002049,6.67e-13,78;UBERON:0007798,6.67e-13,78;UBERON:0002066,4.84e-12,5;UBERON:0000055,6.51e-11,68;UBERON:0003422,2.63e-10,6;UBERON:0007625,1.82e-09,11;UBERON:0000478,3.63e-09,24;UBERON:0004535,1.85e-08,109;UBERON:0001009,3.68e-08,112;UBERON:0002506,4.89e-08,1;UBERON:0001769,4.89e-08,1;UBERON:0001473,1.25e-07,8;UBERON:0004536,1.25e-07,8;UBERON:0006558,1.25e-07,8;UBERON:0001801,1.86e-07,14;UBERON:0000488,2.47e-07,4;UBERON:0010077,2.80e-07,4;UBERON:0005389,2.80e-07,4;UBERON:0000484,2.80e-07,4;UBERON:0002546,2.80e-07,4;UBERON:0000965,2.80e-07,4;UBERON:0001803,2.80e-07,4;UBERON:0003073,2.80e-07,4;UBERON:0005426,2.80e-07,4;UBERON:0001310,3.83e-07,4;UBERON:0007500,4.10e-07,59;UBERON:0001981,4.10e-07,59;UBERON:0004537,4.10e-07,59;UBERON:0006965,4.10e-07,59;UBERON:0001638,6.85e-07,9;UBERON:0003920,6.85e-07,9;UBERON:0004582,6.85e-07,9 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0.662794751455832,1.34465029290355,0.602694528023977,0,0.487932798790507,0.246242116153576,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.850813354476611,0.886917589850256,1.31752178539689,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,3.5576626268671,1.00416183829401,0,0,0,0,0,0.803697554556718,0,1.0135033243499,0,0,0,0,0,0,0,0.12663051166458,1.05927344650575,0.286836620748814,0.354668382198357,0.560677600142307,0,0.24666754841716,0,0,0.163461903113459,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,1.82032272387605,0,0,0,0,0,0,0.150238058906597,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0.110293972732394,0,0,0,0,0,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0,3.77449182656756,0,0,0,0,0,0,5.77325368101093,0.579652024875384,1.05667824812239,0.144366447761074,0.925971025153221,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0.43596006883328,0.22001485746285,3.74887975697556,0,0,1.59562869950922,3.12022310734098,0,0,0,0,0,1.64648067356154,0,0,2.37585561880029,0.904318131178758,0.871533458600294,0.399891964728228,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,0.178428988797162,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355123450626254,0.164254312027618,0,0,0,0,0,0.229628896329213,0,0.393373244878272,0,0.385076685522074,0,1.46139224653261,0.527758144464379,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0.512900250232778,0.328014645699706,0.325378394664303,0,0,0,0,0,0,0,0.308097234229289,0,0.413509717453592,0.107420244868274,0.145016693914229,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,1.43124886741991,0,0,0.190630193923825,0,0,0,0,0.539617372749944,0,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0,0,0,2.02910376962704,0.30982349809975,0.845086807596724,2.86822704408103,3.53696547647236,1.07001315444375,0,0,0,0.379473173765715,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445234820091624,0,0,0,0,0,0.20453736500431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569710279235006,0,0,0,0,2.10674464824283,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0.959293472527256,0,0,0,0.721429382263803,0,0,0,0,0,0,0.124252535565433,0,0,0,0.101998217636322,1.15580235960608,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0.360299883542404,0,0.236349546921671,0,0.13480708770837,0.196854963029498,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.315222829196793,0.157363764404994,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0.113312091520126,0.293104467356165,1.32506888912221,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0.318593534327405,0,0.776314784381297,0,0.265841714557995,2.60872530905867,0,0,0,0.545545977607678,0,0,1.59238355479446,0,0.686791410365586,0,0,0,0.214441591374926,0.260994291965212,1.13352962756136,2.77826969188601,0,0.895444205407437,0.308801447160972,0.219284049578707,0,0.38582807654183,0,0,5.52688546769918,0,0,0,0,0,0.327609848846413,1.2288645437686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0.3062454773532,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0085253435176,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0.171488009437418,0.271878931907327,0,0,0,0,0,0,0,0.215927591218621,0,0.0714765441766563,0,0,0,0,0,0,0,0,0.591660003652827,0.255640214277473,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0.0939839179798536,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0.662794751455832,1.34465029290355,0.602694528023977,0,0.487932798790507,0.246242116153576,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.850813354476611,0.886917589850256,1.31752178539689,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,3.5576626268671,1.00416183829401,0,0,0,0,0,0.803697554556718,0,1.0135033243499,0,0,0,0,0,0,0,0.12663051166458,1.05927344650575,0.286836620748814,0.354668382198357,0.560677600142307,0,0.24666754841716,0,0,0.163461903113459,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,1.82032272387605,0,0,0,0,0,0,0.150238058906597,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0.110293972732394,0,0,0,0,0,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0,3.77449182656756,0,0,0,0,0,0,5.77325368101093,0.579652024875384,1.05667824812239,0.144366447761074,0.925971025153221,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0.43596006883328,0.22001485746285,3.74887975697556,0,0,1.59562869950922,3.12022310734098,0,0,0,0,0,1.64648067356154,0,0,2.37585561880029,0.904318131178758,0.871533458600294,0.399891964728228,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,0.178428988797162,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355123450626254,0.164254312027618,0,0,0,0,0,0.229628896329213,0,0.393373244878272,0,0.385076685522074,0,1.46139224653261,0.527758144464379,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0.512900250232778,0.328014645699706,0.325378394664303,0,0,0,0,0,0,0,0.308097234229289,0,0.413509717453592,0.107420244868274,0.145016693914229,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,1.43124886741991,0,0,0.190630193923825,0,0,0,0,0.539617372749944,0,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0,0,0,2.02910376962704,0.30982349809975,0.845086807596724,2.86822704408103,3.53696547647236,1.07001315444375,0,0,0,0.379473173765715,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445234820091624,0,0,0,0,0,0.20453736500431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569710279235006,0,0,0,0,2.10674464824283,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0.959293472527256,0,0,0,0.721429382263803,0,0,0,0,0,0,0.124252535565433,0,0,0,0.101998217636322,1.15580235960608,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0.360299883542404,0,0.236349546921671,0,0.13480708770837,0.196854963029498,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.315222829196793,0.157363764404994,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0.113312091520126,0.293104467356165,1.32506888912221,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0.318593534327405,0,0.776314784381297,0,0.265841714557995,2.60872530905867,0,0,0,0.545545977607678,0,0,1.59238355479446,0,0.686791410365586,0,0,0,0.214441591374926,0.260994291965212,1.13352962756136,2.77826969188601,0,0.895444205407437,0.308801447160972,0.219284049578707,0,0.38582807654183,0,0,5.52688546769918,0,0,0,0,0,0.327609848846413,1.2288645437686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0.3062454773532,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0085253435176,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0.171488009437418,0.271878931907327,0,0,0,0,0,0,0,0.215927591218621,0,0.0714765441766563,0,0,0,0,0,0,0,0,0.591660003652827,0.255640214277473,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0.0939839179798536,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p9@ITPR2 | |||
}} | }} |
Latest revision as of 23:42, 17 September 2015
Short description: | p9@ITPR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_ITPR2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000545902_5end |
EntrezGene: | ITPR2 |
HGNC: | 6181 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the umbilical vein | 3.74e-14 | 2 |
extraembryonic cell | 9.95e-12 | 19 |
mesenchymal stem cell of umbilical cord | 2.63e-10 | 6 |
pigment cell (sensu Vertebrata) | 4.89e-08 | 1 |
iris pigment epithelial cell | 4.89e-08 | 1 |
mesenchymal stem cell of Wharton's jelly | 5.22e-08 | 1 |
mucus secreting cell | 1.91e-07 | 1 |
crystallin accumulating cell | 2.80e-07 | 4 |
vertebrate lens cell | 2.80e-07 | 4 |
lens epithelial cell | 2.80e-07 | 4 |
smooth muscle cell of the umbilical artery | 3.83e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
umbilical blood vessel | 2.32e-17 | 9 |
vasculature | 6.67e-13 | 78 |
vascular system | 6.67e-13 | 78 |
umbilical vein | 4.84e-12 | 5 |
vessel | 6.51e-11 | 68 |
mesenchyme of umbilical cord | 2.63e-10 | 6 |
pigment epithelium of eye | 1.82e-09 | 11 |
extraembryonic structure | 3.63e-09 | 24 |
cardiovascular system | 1.85e-08 | 109 |
circulatory system | 3.68e-08 | 112 |
iris epithelium | 4.89e-08 | 1 |
iris | 4.89e-08 | 1 |
lymphatic vessel | 1.25e-07 | 8 |
lymph vasculature | 1.25e-07 | 8 |
lymphatic part of lymphoid system | 1.25e-07 | 8 |
anterior segment of eyeball | 1.86e-07 | 14 |
atypical epithelium | 2.47e-07 | 4 |
cuboidal epithelium | 2.80e-07 | 4 |
transparent eye structure | 2.80e-07 | 4 |
simple cuboidal epithelium | 2.80e-07 | 4 |
cranial placode | 2.80e-07 | 4 |
lens of camera-type eye | 2.80e-07 | 4 |
epithelium of lens | 2.80e-07 | 4 |
lens placode | 2.80e-07 | 4 |
lens vesicle | 2.80e-07 | 4 |
umbilical artery | 3.83e-07 | 4 |
epithelial tube open at both ends | 4.10e-07 | 59 |
blood vessel | 4.10e-07 | 59 |
blood vasculature | 4.10e-07 | 59 |
vascular cord | 4.10e-07 | 59 |
vein | 6.85e-07 | 9 |
venous blood vessel | 6.85e-07 | 9 |
venous system | 6.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 1.91e-07 | 1 |