FFCP PHASE1:Hg19::chr12:6976687..6976696,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:6976687..6976696,+ to FFCP PHASE1:Hg19::chr12:6976687..6976696,+: NSchange) |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7167 | |EntrezGene=7167 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12009 | |HGNC=12009 | ||
|TSSclassifier=strong | |||
|UniProt=P60174,Q53HE2 | |UniProt=P60174,Q53HE2 | ||
|association_with_transcript=0bp_to_ENST00000396705,NM_000365_5end | |||
|cluster_id=chr12:6976687..6976696,+ | |||
|description=CAGE_peak_1_at_TPI1_5end | |||
|id=chr12:6976687..6976696,+ | |||
|ontology_enrichment_celltype=CL:0000548!2.42e-28!679;CL:0000004!2.42e-28!679;CL:0000255!2.42e-28!679;CL:0000012!1.92e-27!682;CL:0000055!2.37e-20!180;CL:0000144!7.99e-20!625;CL:0000183!1.35e-17!59;CL:0002371!9.04e-17!591;CL:0000222!2.05e-16!119;CL:0000680!3.76e-16!57;CL:0000056!3.76e-16!57;CL:0000355!3.76e-16!57;CL:0000003!5.99e-16!722;CL:0002321!1.14e-15!248;CL:0000187!1.39e-15!54;CL:0000220!1.57e-15!246;CL:0000393!8.78e-15!60;CL:0000211!8.78e-15!60;CL:0000192!1.17e-14!42;CL:0000514!1.17e-14!42;CL:0000359!1.66e-14!32;CL:0000066!3.48e-10!254;CL:0000063!9.86e-09!578;CL:0000057!7.83e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.86e-13;32!CL:0000192;2.24e-10;43!CL:0000187;7.36e-09;55!CL:0000393;1.83e-07;61!CL:0000211;1.83e-07;61!CL:0000134;2.54e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.19e-16,121;CL:0002321,6.28e-16,250;CL:0000680,7.67e-16,58;CL:0000056,7.67e-16,58;CL:0000355,7.67e-16,58;CL:0000187,2.87e-15,55;CL:0000393,1.64e-14,61;CL:0000211,1.64e-14,61;CL:0000359,1.66e-14,32;CL:0000192,2.76e-14,43;CL:0000514,2.76e-14,43;CL:0000066,3.07e-10,253;CL:0000057,3.69e-07,76 | |||
|ontology_enrichment_development_v019=CL:0000514;2.24e-10;43!CL:0000355;1.68e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!2.78e-17!70;UBERON:0001637!2.99e-16!42;UBERON:0003509!2.99e-16!42;UBERON:0004572!2.99e-16!42;UBERON:0000486!3.88e-16!82;UBERON:0000914!1.13e-15!83;UBERON:0002329!1.13e-15!83;UBERON:0003077!1.13e-15!83;UBERON:0003059!1.13e-15!83;UBERON:0007282!1.13e-15!83;UBERON:0009618!1.13e-15!83;UBERON:0007285!1.13e-15!83;UBERON:0003914!1.49e-14!118;UBERON:0001134!1.62e-14!61;UBERON:0002036!1.62e-14!61;UBERON:0003082!1.62e-14!61;UBERON:0001981!7.35e-14!60;UBERON:0007500!7.35e-14!60;UBERON:0004537!7.35e-14!60;UBERON:0006965!7.35e-14!60;UBERON:0000055!7.56e-14!69;UBERON:0004872!7.96e-14!84;UBERON:0002385!2.23e-13!63;UBERON:0001015!2.23e-13!63;UBERON:0000383!2.23e-13!63;UBERON:0002049!4.41e-13!79;UBERON:0007798!4.41e-13!79;UBERON:0005256!1.32e-12!143;UBERON:0004573!2.14e-12!33;UBERON:0004571!2.14e-12!33;UBERON:0000490!1.32e-11!138;UBERON:0002100!1.17e-09!216;UBERON:0003104!9.66e-09!238;UBERON:0009142!9.66e-09!238;UBERON:0004535!8.09e-08!110;UBERON:0001009!2.03e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.69e-11;33!UBERON:0004571;2.69e-11;33!UBERON:0001637;3.05e-11;42!UBERON:0003509;3.05e-11;42!UBERON:0004572;3.05e-11;42!UBERON:0007500;2.55e-09;56!UBERON:0001981;2.55e-09;56!UBERON:0004537;2.55e-09;56!UBERON:0003914;1.35e-08;74!UBERON:0000055;7.11e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,2.09e-19,78;UBERON:0002329,5.24e-17,71;UBERON:0003059,5.24e-17,71;UBERON:0007282,5.24e-17,71;UBERON:0004290,5.24e-17,71;UBERON:0009618,5.24e-17,71;UBERON:0003077,1.47e-16,72;UBERON:0007285,1.47e-16,72;UBERON:0007524,2.17e-16,73;UBERON:0001637,2.99e-16,42;UBERON:0003509,2.99e-16,42;UBERON:0004572,2.99e-16,42;UBERON:0000486,6.48e-16,83;UBERON:0003914,1.06e-14,117;UBERON:0001134,2.98e-14,62;UBERON:0002036,2.98e-14,62;UBERON:0003082,2.98e-14,62;UBERON:0000490,8.54e-14,148;UBERON:0000055,2.09e-13,68;UBERON:0004872,2.10e-13,83;UBERON:0007500,2.10e-13,59;UBERON:0001981,2.10e-13,59;UBERON:0004537,2.10e-13,59;UBERON:0006965,2.10e-13,59;UBERON:0002385,3.85e-13,64;UBERON:0001015,3.85e-13,64;UBERON:0000383,3.85e-13,64;UBERON:0002049,1.16e-12,78;UBERON:0007798,1.16e-12,78;UBERON:0004573,2.14e-12,33;UBERON:0004571,2.14e-12,33;UBERON:0005256,2.66e-11,122;UBERON:0003104,5.38e-11,160;UBERON:0009142,5.38e-11,160;UBERON:0002100,2.15e-10,199;UBERON:0004535,1.63e-07,109;UBERON:0000119,3.28e-07,309;UBERON:0001009,3.98e-07,112;UBERON:0000483,8.11e-07,306 | |||
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| ||
|short_description=p1@TPI1 | |||
}} | }} |
Latest revision as of 05:54, 20 September 2015
Short description: | p1@TPI1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TPI1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000396705, NM_000365_5end |
EntrezGene: | TPI1 |
HGNC: | 12009 |
UniProt: | P60174Q53HE2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.19e-16 | 121 |
embryonic cell | 6.28e-16 | 250 |
muscle precursor cell | 7.67e-16 | 58 |
myoblast | 7.67e-16 | 58 |
multi-potent skeletal muscle stem cell | 7.67e-16 | 58 |
muscle cell | 2.87e-15 | 55 |
electrically responsive cell | 1.64e-14 | 61 |
electrically active cell | 1.64e-14 | 61 |
vascular associated smooth muscle cell | 1.66e-14 | 32 |
smooth muscle cell | 2.76e-14 | 43 |
smooth muscle myoblast | 2.76e-14 | 43 |
epithelial cell | 3.07e-10 | 253 |
fibroblast | 3.69e-07 | 76 |