FFCP PHASE1:Hg19::chr12:94542330..94542379,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:94542330..94542379,+ to FFCP PHASE1:Hg19::chr12:94542330..94542379,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10154 | |EntrezGene=10154 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9106 | |HGNC=9106 | ||
|TSSclassifier=strong | |||
|UniProt=O60486 | |UniProt=O60486 | ||
|association_with_transcript=-119bp_to_ENST00000258526,NM_005761,uc001tdc.2_5end | |||
|cluster_id=chr12:94542330..94542379,+ | |||
|description=CAGE_peak_2_at_PLXNC1_5end | |||
|id=chr12:94542330..94542379,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.44e-46!140;CL:0000037!4.29e-42!172;CL:0000566!4.29e-42!172;CL:0002032!4.50e-40!165;CL:0000837!4.50e-40!165;CL:0000988!3.95e-39!182;CL:0002087!5.50e-38!119;CL:0002031!4.94e-36!124;CL:0000766!1.69e-27!76;CL:0000763!4.77e-25!112;CL:0000049!4.77e-25!112;CL:0000557!1.69e-24!71;CL:0002009!5.42e-24!65;CL:0002194!1.03e-22!63;CL:0000576!1.03e-22!63;CL:0000040!1.03e-22!63;CL:0000559!1.03e-22!63;CL:0002057!6.74e-22!42;CL:0000839!3.04e-21!70;CL:0000860!7.17e-19!45;CL:0000542!1.76e-13!53;CL:0000051!1.76e-13!53;CL:0000838!4.19e-13!52;CL:0000945!1.17e-08!24;CL:0000826!1.17e-08!24;CL:0000219!1.95e-07!390;CL:0000236!5.39e-07!14;CL:0000134!9.22e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000473;5.03e-20;39!CL:0000234;5.03e-20;39!CL:0000860;8.06e-19;33!CL:0002057;8.06e-19;33!CL:0000576;7.98e-17;48!CL:0000766;8.73e-16;69!CL:0002087;4.76e-14;104!CL:0000738;9.18e-12;136!CL:0000945;1.19e-09;24!CL:0000763;2.60e-09;100!CL:0000542;1.02e-08;53!CL:0000988;5.77e-08;177!CL:0000094;2.55e-07;8!CL:0000236;7.74e-07;13!CL:0000235;8.55e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.27e-57,136;CL:0000037,3.51e-49,168;CL:0002087,4.59e-47,115;CL:0000988,7.52e-47,177;CL:0002032,1.45e-46,161;CL:0000837,1.45e-46,161;CL:0002031,8.20e-45,120;CL:0000766,6.38e-36,72;CL:0000557,3.60e-32,67;CL:0002009,6.72e-32,61;CL:0000473,8.61e-32,48;CL:0000234,8.61e-32,48;CL:0002194,2.74e-30,59;CL:0000576,2.74e-30,59;CL:0000040,2.74e-30,59;CL:0000559,2.74e-30,59;CL:0000763,1.16e-29,108;CL:0000049,1.16e-29,108;CL:0000839,2.34e-28,66;CL:0000860,1.66e-26,42;CL:0002057,1.66e-26,42;CL:0000542,6.89e-15,53;CL:0000051,6.89e-15,53;CL:0000838,1.93e-14,52;CL:0000945,7.10e-10,24;CL:0000826,7.10e-10,24;CL:0000134,4.15e-09,354;CL:0000219,1.06e-08,386;CL:0002320,3.35e-08,361;CL:0002393,2.14e-07,9;CL:0002397,2.14e-07,9;CL:0000236,2.17e-07,14;CL:0000094,2.81e-07,8;CL:0000235,8.63e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;3.64e-19;42!CL:0000049;3.22e-09;108!CL:0000051;1.02e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.51e-31!102;UBERON:0003061!7.51e-31!102;UBERON:0002193!2.41e-26!112;UBERON:0002371!2.11e-21!80;UBERON:0001474!7.91e-19!86;UBERON:0002405!2.43e-18!115;UBERON:0007023!8.09e-17!115;UBERON:0004765!1.46e-14!101;UBERON:0001434!1.46e-14!101;UBERON:0000178!2.88e-08!15;UBERON:0000179!2.88e-08!15;UBERON:0000463!2.88e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.36e-10;15!UBERON:0000179;9.36e-10;15!UBERON:0000463;9.36e-10;15!UBERON:0002390;3.62e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.41e-39,98;UBERON:0003061,6.41e-39,98;UBERON:0002193,1.46e-34,108;UBERON:0002371,9.55e-28,76;UBERON:0002405,3.90e-26,93;UBERON:0001474,8.14e-24,82;UBERON:0004765,1.74e-19,90;UBERON:0001434,4.85e-18,100;UBERON:0007023,4.74e-10,114;UBERON:0000178,1.06e-09,15;UBERON:0000179,1.06e-09,15;UBERON:0000463,1.06e-09,15;UBERON:0003081,6.14e-08,203;UBERON:0002384,1.53e-07,371;UBERON:0002204,1.71e-07,167 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,1.34465029290355,0,0,0,0.246242116153576,0,0,0.286235987131057,0,0.502170558379211,14.5949604978587,17.3232243739386,16.6866856385,3.54027849164014,4.22212337906934,6.03782880932696,0,0,0,1.54934401160603,0,6.75281010470149,12.1878989877013,18.450089167253,12.3696196308036,51.2766436009427,76.4389051804792,70.0605543964987,13.9582309228382,7.935394817465,10.4311146310761,19.5240391000775,9.04569353648017,8.981484755958,7.48000220037591,2.30544635876191,4.02019790810595,31.3718569470323,23.2374486090177,12.1883837934908,14.1181754656954,9.5517152520246,8.31476892446813,36.4239831921374,30.1673285451528,30.688182038354,3.95821560224059,2.59302754908121,1.70489900213078,27.2796684310869,34.6104987061595,36.1236904417433,3.26623264833766,0,2.38907729175628,28.4537766237683,32.0401543309181,19.9371304087757,7.6051903072299,7.65375479874157,7.12839394728478,7.18903239337569,7.50884464207532,9.16135844173357,9.69043328720245,10.1447505371536,6.57590953552682,10.5597746676794,8.7382177801941,7.11607403090844,5.9742231159311,4.00395987036012,5.74752439954483,3.96626923670917,2.86216126360609,9.10740750575117,9.39579502993502,6.88091810625412,11.8954195721123,2.80254281490768,5.79444986505169,2.16380747125216,2.75107533924415,1.64481199199607,1.33749196312542,0.977766799900771,1.4203434172042,0,0.557052284425868,1.47302953737419,0.443067789167242,1.89562704635511,0.512365278902701,0.390178042679635,3.78207180588455,5.25065033793112,3.76744011455568,0.741432815810302,1.87278579662799,2.09071047609954,1.13309342697566,1.53288197440768,2.40539211837841,1.01207876807801,1.59282707162048,2.60433381542567,2.85135613334512,2.25862678616659,1.15187950038977,2.49861453104692,5.20909954496837,3.28451198768419,2.01606743224732,1.60464117470104,2.17236605824198,7.31420598941885,4.69490601792545,1.15076305659177,0,0,0,0,0,0,0,0.175669571386252,5.43563163315507,0,0,2.27183175558278,1.56716763569341,2.26028532882071,2.8618874916641,2.85997455390064,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,54.0299711487859,89.1894607541148,0,0,0,0,0.573673241497627,1.41867352879343,1.12135520028461,0,0,1.24484414159907,0.134710672069688,0,0.908144565869588,0,0,0,0,0.149448680551801,0,0,0,0,0,0,11.8800285728205,4.69807165629258,0,0,0,0,0,0,2.14541457059314,4.5071417671979,0.567160915800105,9.68704032719855,5.55249210928275,0.423863802319124,0,0.206105058476878,0,0.37223371266318,0,0.194874010322397,2.27190396819703,2.85354685791128,0,8.52023022039874,2.31729825923573,0.67824236924195,0,0,0,0.243947412259191,0.530119073285941,0.580969714347592,1.55491582523056,0.504641701751257,0.36497735907583,3.12899064659632,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94017422771084,0,0.982827216677626,0.590789906681404,0,2.33678033231916,0,0,0,0.100528972411631,0,0.325808305310325,0,0,0.34779121492523,0,0,0,0,0,0,38.409852949634,33.9306184451895,41.1708319539777,0,0,0,0,0,0,0,0.088048434013226,6.63449969730471,14.1237554348622,1.76739406796932,82.3567688969433,27.8851550657543,32.8208852188132,11.9750712215894,20.4626710479614,150.471871979803,138.62581982583,0,0,0,0,0,0.845302752556,0,0,0,0,0,1.28680194292333,0,0,0,1.06617584622764,0.791951872933429,0,0,0,38.919609805181,36.1625105831131,40.058448501776,0,0,0,0,0,0,0.336255431980582,2.75843064282698,1.50939302401662,2.69520376187472,1.52456774533478,0,1.54657762555539,2.68026024534958,1.91381625495949,63.6655970355105,89.7484377612075,99.8741387380845,0.12269149171914,0,0,0,0.356857977594324,0.473107245101804,0.117141414992713,0,0,1.03473071292505,0,0,0.434418072340414,0.195801157462741,0,6.20304078368662,11.0014242417495,6.93729125722388,0,0,0,0.248107807818777,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,2.05461064305758,0,0,0,0,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36994326789761,0.0915694648183434,0,0,0,0,0.096670718292122,0.154048617114644,0,0,1.28904293841928,0.725083469571143,1.02271952899321,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0.511795582622668,6.41908482050881,0,0,1.79872457583315,1.92175920815238,0.471249609382746,0,0,0,2.92580243453754,0,0,0,0,0,0,0,0,1.73632660280006,9.83842128069949,0,0.30982349809975,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0,0,0,2.91845782408015,0,0,0,0,8.11916174771471,6.88173486428138,12.5322381178316,8.09988036556483,9.87269455406866,6.48473311192717,9.72056587028607,15.8625035258854,0,0.962479855263359,0,5.01668572839441,0.865615277858669,2.27653898714925,2.23196781820351,0,3.25559129225023,0.846694330895531,0,2.24637742490767,4.56469358066384,0,7.51903431270201,0.677167111206413,0.963528450622197,0.201799707191048,0.851692475380653,4.46556948182494,0.921722292925374,0.447352215784832,0.333698283423817,0.781552381608161,0.835218521685727,1.23087398947712,1.08182271390393,0,1.4098700508785,0,3.80921266106924,0,2.563197838382,0,0,1.18785872333055,0,0.994147647766298,3.93874365949436,0.556543525114529,1.483234868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| ||
|short_description=p2@PLXNC1 | |||
}} | }} |
Latest revision as of 00:54, 16 September 2015
Short description: | p2@PLXNC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PLXNC1_5end |
Coexpression cluster: | NA |
Association with transcript: | -119bp_to_ENST00000258526, NM_005761, uc001tdc.2_5end |
EntrezGene: | PLXNC1 |
HGNC: | 9106 |
UniProt: | O60486 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.41e-39 | 98 |
blood island | 6.41e-39 | 98 |
hemolymphoid system | 1.46e-34 | 108 |
bone marrow | 9.55e-28 | 76 |
immune system | 3.90e-26 | 93 |
bone element | 8.14e-24 | 82 |
skeletal element | 1.74e-19 | 90 |
skeletal system | 4.85e-18 | 100 |
adult organism | 4.74e-10 | 114 |
blood | 1.06e-09 | 15 |
haemolymphatic fluid | 1.06e-09 | 15 |
organism substance | 1.06e-09 | 15 |
lateral plate mesoderm | 6.14e-08 | 203 |
connective tissue | 1.53e-07 | 371 |
musculoskeletal system | 1.71e-07 | 167 |