FFCP PHASE1:Hg19::chr13:111358763..111358768,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:111358763..111358768,+ to FFCP PHASE1:Hg19::chr13:111358763..111358768,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:111358763..111358768,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr13:111358763..111358768,+ | |||
|id=chr13:111358763..111358768,+ | |||
|ontology_enrichment_celltype=CL:0000860!4.83e-31!45;CL:0002057!6.52e-28!42;CL:0000738!6.54e-24!140;CL:0000037!2.16e-23!172;CL:0000566!2.16e-23!172;CL:0000557!3.95e-23!71;CL:0000988!1.25e-22!182;CL:0000839!3.30e-22!70;CL:0002009!3.56e-22!65;CL:0002194!8.69e-22!63;CL:0000576!8.69e-22!63;CL:0000040!8.69e-22!63;CL:0000559!8.69e-22!63;CL:0002032!1.86e-21!165;CL:0000837!1.86e-21!165;CL:0002031!4.91e-21!124;CL:0002087!2.35e-20!119;CL:0000763!3.82e-20!112;CL:0000049!3.82e-20!112;CL:0000766!2.25e-19!76;CL:0000134!3.61e-10!358;CL:0002320!6.33e-10!365;CL:0000219!1.06e-09!390;CL:0000034!2.72e-08!444;CL:0000048!7.03e-08!430;CL:0000451!1.11e-07!10;CL:0000723!2.02e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.53e-115;33!CL:0002057;1.53e-115;33!CL:0000473;1.02e-79;39!CL:0000234;1.02e-79;39!CL:0000576;2.69e-53;48!CL:0000766;1.02e-27;69!CL:0000763;4.22e-16;100!CL:0002087;4.44e-13;104!CL:0000738;7.62e-10;136!CL:0002541;4.07e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.63e-98,42;CL:0002057,1.63e-98,42;CL:0000473,2.20e-85,48;CL:0000234,2.20e-85,48;CL:0002194,5.37e-67,59;CL:0000576,5.37e-67,59;CL:0000040,5.37e-67,59;CL:0000559,5.37e-67,59;CL:0002009,1.27e-64,61;CL:0000839,2.61e-59,66;CL:0000557,2.43e-58,67;CL:0000766,6.83e-54,72;CL:0000763,5.10e-39,108;CL:0000049,5.10e-39,108;CL:0002087,8.88e-34,115;CL:0002031,4.21e-32,120;CL:0000738,1.09e-29,136;CL:0000988,2.68e-26,177;CL:0000037,3.21e-26,168;CL:0002032,9.64e-26,161;CL:0000837,9.64e-26,161;CL:0000134,2.80e-11,354;CL:0002320,6.50e-11,361;CL:0000219,1.27e-09,386;CL:0000048,4.80e-08,427;CL:0000723,7.92e-08,433;CL:0000034,1.51e-07,441;CL:0002541,4.69e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;3.36e-73;42!CL:0000049;9.76e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.12e-20!80;UBERON:0001474!9.65e-19!86;UBERON:0002390!2.21e-18!102;UBERON:0003061!2.21e-18!102;UBERON:0002405!8.76e-18!115;UBERON:0002193!5.21e-17!112;UBERON:0004765!9.04e-15!101;UBERON:0001434!9.04e-15!101;UBERON:0002384!5.36e-09!375;UBERON:0002204!5.53e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;4.07e-07;3!UBERON:0000920;4.07e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.48e-51,76;UBERON:0001474,1.33e-46,82;UBERON:0002390,9.28e-44,98;UBERON:0003061,9.28e-44,98;UBERON:0002405,2.37e-43,93;UBERON:0004765,6.35e-42,90;UBERON:0002193,4.12e-39,108;UBERON:0001434,4.08e-37,100;UBERON:0002204,1.16e-19,167;UBERON:0003081,1.15e-17,203;UBERON:0002384,2.05e-10,371;UBERON:0000926,8.66e-10,315;UBERON:0004120,8.66e-10,315;UBERON:0006603,8.66e-10,315;UBERON:0000920,4.69e-07,3 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0.123121058076788,0,0,0,0,0,0.152826811495903,0.164201178899891,0.472264687882075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30858414901608,3.77875943688809,6.0646015296954,1.62700325833979,2.87817521615278,13.3173739484895,2.01384674625505,3.07392847834921,4.7296445977717,2.41321976515633,10.3277549373412,31.1480919166986,1.50593871634084,3.0019676506363,9.21366286224847,2.75475503133812,6.09765151444578,10.8687311385837,1.64925650093358,1.99463657621632,3.40979800426155,4.64334781805734,6.80862269629368,16.1933784738849,1.00499466102697,5.21482918420201,6.5156653411535,7.26479403160043,13.9945501675275,19.6206680213348,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604820229674197,0.534880391567015,0,0,0,0,0,0,0,0,0.486634870302636,0,0.221729397462564,0,0,0,0,0.324547393654683,0.348259474598534,0.132957960518865,0,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0.161646056818812,0,0,0,0,0,0.286804595389004,0.121973706129595,0,0,0.10366105501537,0,0.36497735907583,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,4.41463099414651,0.122988438543114,0,0,0,0,0,0.651616610620649,0,0,0,0,0,0,0.190254152234598,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0.621984346622316,0,0.25248486685276,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,0,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0.206768026122887,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.386682873168488,0,0,0,0.107420244868274,0.145016693914229,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0.213425530045242,0.159426272728822,0,0.383010740264733,0,0,0,0.912938716132769,0,0,0.169291777801603,0,0,0.425846237690326,1.37402137902306,0,0,0,0,0.278406173895242,0,0.540911356951966,0,0,0,0,0,0.891547074219827,0,0.23874448473769,0.593929361665277,0,0,0,0,0.329607748453519,0,0,0,0.251932747854276,0,0,0,0,0,1.53471711068062,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0.179515288819544,0.108647371922008,2.23300811812344,0,1.06606955203727,1.02193298195737,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,2.37216902944498,0,0,0,0,0,0,0.391329237864179,0.242780379534093,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0,0,0.483781656445426,1.31560770755134,0.328461828212837,0,0,0,0.137041924646751,0,0.0633107959558787,0,0,0,0,0.288180834308212,0,0.514784993585894,0.432164393964449,0,0,0,0,0.101998217636322,0,0,0,0,0,0.262887354279314,0,0,0,0.199679000498991,0,0,0,0,4.65983798109815,0.0787831823072236,0,0,0,0.338693328263138,0,0,0,0.137539436597234,0.415440338029185,0,0.77380195455795,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.16178611036711,0,0,0,0,0,0.655745261419609,0,0,0,0.1251909307065,0,0,0,0.138348634936231,0.124980407962107,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.673498977531838,0,0,0,0,0,0,0,0.179088841081487,0,0,0.176689145945881,0,0.168942440653073,0,0,0,0,0.584580926518165,0.132864840313363,0.163565394255844,0,0,0,0.19998739585493,0,0.344429959321631,0,0,0,0,0.127894371303652,0,0,0,0,0,0.123935764259002,0,0,0.552032215008773,0,0,0,0.128458450192919,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514464028312255,0,0,0,0.111231401892069,0,0,0.560544326627578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40363678077263,0.397901550322736,0.118920090777569,0,0.439762066981716,0,0,0,0,0,0,0,0,0,0,0,0,0.399764623699716,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0.380095503034311,0.203977659483963,0,0,0,0,0,0,0.103432995861895,0,0,0.0645889098360061,2.04846557176331,0,0,0,0,0,0.134704106029175,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0.123121058076788,0,0,0,0,0,0.152826811495903,0.164201178899891,0.472264687882075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30858414901608,3.77875943688809,6.0646015296954,1.62700325833979,2.87817521615278,13.3173739484895,2.01384674625505,3.07392847834921,4.7296445977717,2.41321976515633,10.3277549373412,31.1480919166986,1.50593871634084,3.0019676506363,9.21366286224847,2.75475503133812,6.09765151444578,10.8687311385837,1.64925650093358,1.99463657621632,3.40979800426155,4.64334781805734,6.80862269629368,16.1933784738849,1.00499466102697,5.21482918420201,6.5156653411535,7.26479403160043,13.9945501675275,19.6206680213348,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604820229674197,0.534880391567015,0,0,0,0,0,0,0,0,0.486634870302636,0,0.221729397462564,0,0,0,0,0.324547393654683,0.348259474598534,0.132957960518865,0,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0.161646056818812,0,0,0,0,0,0.286804595389004,0.121973706129595,0,0,0.10366105501537,0,0.36497735907583,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,4.41463099414651,0.122988438543114,0,0,0,0,0,0.651616610620649,0,0,0,0,0,0,0.190254152234598,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0.621984346622316,0,0.25248486685276,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,0,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0.206768026122887,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.386682873168488,0,0,0,0.107420244868274,0.145016693914229,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0.213425530045242,0.159426272728822,0,0.383010740264733,0,0,0,0.912938716132769,0,0,0.169291777801603,0,0,0.425846237690326,1.37402137902306,0,0,0,0,0.278406173895242,0,0.540911356951966,0,0,0,0,0,0.891547074219827,0,0.23874448473769,0.593929361665277,0,0,0,0,0.329607748453519,0,0,0,0.251932747854276,0,0,0,0,0,1.53471711068062,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0.179515288819544,0.108647371922008,2.23300811812344,0,1.06606955203727,1.02193298195737,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,2.37216902944498,0,0,0,0,0,0,0.391329237864179,0.242780379534093,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0,0,0.483781656445426,1.31560770755134,0.328461828212837,0,0,0,0.137041924646751,0,0.0633107959558787,0,0,0,0,0.288180834308212,0,0.514784993585894,0.432164393964449,0,0,0,0,0.101998217636322,0,0,0,0,0,0.262887354279314,0,0,0,0.199679000498991,0,0,0,0,4.65983798109815,0.0787831823072236,0,0,0,0.338693328263138,0,0,0,0.137539436597234,0.415440338029185,0,0.77380195455795,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.16178611036711,0,0,0,0,0,0.655745261419609,0,0,0,0.1251909307065,0,0,0,0.138348634936231,0.124980407962107,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.673498977531838,0,0,0,0,0,0,0,0.179088841081487,0,0,0.176689145945881,0,0.168942440653073,0,0,0,0,0.584580926518165,0.132864840313363,0.163565394255844,0,0,0,0.19998739585493,0,0.344429959321631,0,0,0,0,0.127894371303652,0,0,0,0,0,0.123935764259002,0,0,0.552032215008773,0,0,0,0.128458450192919,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514464028312255,0,0,0,0.111231401892069,0,0,0.560544326627578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40363678077263,0.397901550322736,0.118920090777569,0,0.439762066981716,0,0,0,0,0,0,0,0,0,0,0,0,0.399764623699716,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0.380095503034311,0.203977659483963,0,0,0,0,0,0,0.103432995861895,0,0,0.0645889098360061,2.04846557176331,0,0,0,0,0,0.134704106029175,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr13:111358763..111358768,+ | |||
}} | }} |
Latest revision as of 14:34, 24 July 2015
Short description: | p@chr13:111358763..111358768, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:111358763..111358768, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.63e-98 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.63e-98 | 42 |
defensive cell | 2.20e-85 | 48 |
phagocyte | 2.20e-85 | 48 |
monopoietic cell | 5.37e-67 | 59 |
monocyte | 5.37e-67 | 59 |
monoblast | 5.37e-67 | 59 |
promonocyte | 5.37e-67 | 59 |
macrophage dendritic cell progenitor | 1.27e-64 | 61 |
myeloid lineage restricted progenitor cell | 2.61e-59 | 66 |
granulocyte monocyte progenitor cell | 2.43e-58 | 67 |
myeloid leukocyte | 6.83e-54 | 72 |
myeloid cell | 5.10e-39 | 108 |
common myeloid progenitor | 5.10e-39 | 108 |
nongranular leukocyte | 8.88e-34 | 115 |
hematopoietic lineage restricted progenitor cell | 4.21e-32 | 120 |
leukocyte | 1.09e-29 | 136 |
hematopoietic cell | 2.68e-26 | 177 |
hematopoietic stem cell | 3.21e-26 | 168 |
hematopoietic oligopotent progenitor cell | 9.64e-26 | 161 |
hematopoietic multipotent progenitor cell | 9.64e-26 | 161 |
mesenchymal cell | 2.80e-11 | 354 |
connective tissue cell | 6.50e-11 | 361 |
motile cell | 1.27e-09 | 386 |
multi fate stem cell | 4.80e-08 | 427 |
somatic stem cell | 7.92e-08 | 433 |
stem cell | 1.51e-07 | 441 |
chorionic membrane mesenchymal stem cell | 4.69e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.48e-51 | 76 |
bone element | 1.33e-46 | 82 |
hematopoietic system | 9.28e-44 | 98 |
blood island | 9.28e-44 | 98 |
immune system | 2.37e-43 | 93 |
skeletal element | 6.35e-42 | 90 |
hemolymphoid system | 4.12e-39 | 108 |
skeletal system | 4.08e-37 | 100 |
musculoskeletal system | 1.16e-19 | 167 |
lateral plate mesoderm | 1.15e-17 | 203 |
connective tissue | 2.05e-10 | 371 |
mesoderm | 8.66e-10 | 315 |
mesoderm-derived structure | 8.66e-10 | 315 |
presumptive mesoderm | 8.66e-10 | 315 |
egg chorion | 4.69e-07 | 3 |