FFCP PHASE1:Hg19::chr13:45009703..45009715,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:45009703..45009715,+ to FFCP PHASE1:Hg19::chr13:45009703..45009715,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:45009703..45009715,+ | |||
|description=CAGE_peak_at_chr13:45009703..45009715,+ | |||
|id=chr13:45009703..45009715,+ | |||
|ontology_enrichment_celltype=CL:0002057!7.83e-20!42;CL:0000557!4.08e-19!71;CL:0000839!5.11e-19!70;CL:0000860!7.45e-19!45;CL:0000766!7.86e-18!76;CL:0002009!7.20e-16!65;CL:0002194!2.62e-14!63;CL:0000576!2.62e-14!63;CL:0000040!2.62e-14!63;CL:0000559!2.62e-14!63;CL:0000738!2.76e-13!140;CL:0002031!3.71e-13!124;CL:0000763!2.86e-11!112;CL:0000049!2.86e-11!112;CL:0000037!6.38e-10!172;CL:0000566!6.38e-10!172;CL:0000988!2.76e-09!182;CL:0002087!3.46e-09!119;CL:0002032!2.90e-08!165;CL:0000837!2.90e-08!165;CL:0000540!4.73e-07!6;CL:0000031!4.73e-07!6;CL:0000404!4.73e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0001014;1.84e-13;2!CL:0001016;1.84e-13;2!CL:0000860;2.93e-13;33!CL:0002057;2.93e-13;33!CL:0000097;4.73e-12;5!CL:0000576;4.91e-11;48!CL:0000766;1.11e-10;69!CL:0002393;1.43e-10;6!CL:0002397;1.43e-10;6!CL:0000473;1.38e-09;39!CL:0000234;1.38e-09;39!CL:0000623;2.86e-09;3!CL:0000037;1.43e-07;1!CL:0001024;1.43e-07;1!CL:0000163;6.76e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,2.64e-23,67;CL:0000738,8.14e-20,136;CL:0000860,3.36e-19,42;CL:0002057,3.36e-19,42;CL:0000766,7.18e-19,72;CL:0002031,9.28e-19,120;CL:0000839,3.92e-18,66;CL:0002009,5.06e-17,61;CL:0000037,8.32e-17,168;CL:0000473,1.63e-16,48;CL:0000234,1.63e-16,48;CL:0000988,1.03e-15,177;CL:0000763,4.59e-15,108;CL:0000049,4.59e-15,108;CL:0002032,1.85e-14,161;CL:0000837,1.85e-14,161;CL:0001014,1.12e-13,2;CL:0001016,1.12e-13,2;CL:0002194,9.30e-13,59;CL:0000576,9.30e-13,59;CL:0000040,9.30e-13,59;CL:0000559,9.30e-13,59;CL:0000097,2.54e-12,5;CL:0002028,2.54e-12,5;CL:0002087,1.31e-10,115;CL:0000623,1.23e-09,3;CL:0000825,1.23e-09,3;CL:0001024,1.22e-07,1;CL:0002393,3.47e-07,9;CL:0002397,3.47e-07,9;CL:0000163,4.84e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.31e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;1.43e-07;1!DOID:3149;1.43e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,1.58e-07,1;DOID:3149,1.58e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001474!3.31e-19!86;UBERON:0002371!2.58e-18!80;UBERON:0004765!3.35e-15!101;UBERON:0001434!3.35e-15!101;UBERON:0002390!1.33e-14!102;UBERON:0003061!1.33e-14!102;UBERON:0002405!1.94e-13!115;UBERON:0002193!4.85e-13!112;UBERON:0002204!2.55e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.03e-23,76;UBERON:0001474,6.64e-21,82;UBERON:0004765,9.67e-19,90;UBERON:0002405,5.03e-18,93;UBERON:0002390,6.30e-17,98;UBERON:0003061,6.30e-17,98;UBERON:0001434,1.61e-16,100;UBERON:0002193,4.91e-15,108;UBERON:0002204,1.27e-09,167;UBERON:0003081,3.02e-07,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.767658796194425,1.70297735647684,0,0,0,0,0,1.46800219667424,3.87796785972314,2.00544447470142,2.82114131930607,0,0,0,0.145398238779565,0,0,0.464858073811369,0,1.85823822537062,0,0.256160706529101,1.6553756092201,1.03423704220986,0,1.35426486594342,0.564727018627814,0.818718450173537,0.449446968890169,0.918251677112708,0,0.639337125799041,0.329851300186716,1.19678194572979,0.426224750532694,1.45104619314292,0,1.24564449799115,0.75374599577023,0.521482918420201,1.3031330682307,0,1.10483290796269,0.316462387440884,0,0.637812899895131,0.419317291016752,0.44931452458598,0.150176892841506,0.32145117339416,0.285012743741249,0,0.547992461293902,0,0,0,0,0,0,0,0,0,0,0,5.28685314316103,1.12101712596307,0.526768169550154,0,0.393010762749165,1.02800749499755,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0.766440987203842,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0.802320587350522,0.434473211648397,0,0,0,0,0,0,0,0.486634870302636,0,0.221729397462564,0,0.130979075497713,0,0,0,0.174129737299267,0,0.476981248610684,0,0.371457501329565,0.39752481473341,0,0,0,0,0.275118041940067,0.208994966536811,0.258416759169329,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0.264818361626438,0.286836620748814,0,0.560677600142307,1.06748995729705,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0.113432183160021,0.538168907066586,0,0.211931901159562,0,0,0.257640540045629,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0.397589304964456,0.116193942869518,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,1.32438929824395,0,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0,0,0,0,0,0.492663237895943,0.264145302039678,1.86595303986695,1.58531948758658,2.01987893482208,0,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0.985153801009636,1.94064817373566,1.66845947163673,0,0,0.773288812777695,0.502548796003046,0.637938751653163,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0.862856803274467,0.213455115606889,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0.177561725313127,0.164254312027618,0,0.232420756919918,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0.103041011647722,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0.144269212976445,0,0,0,0.191505370132367,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0.223676107892416,0.333698283423817,0,0,0,0,0,0,0.561421621224659,0,0,0,0.284136146806413,0.47748896947538,0.296964680832639,0.307160702099232,0,0,0.111308705022906,0,0,0.398495976502139,0.276283915531148,0,0.102268682502155,0,0,0.0898683511473268,0.179021174675609,0,0,0,0,0,0,0,0.260427761085233,0.174919999992391,0.724999575434793,0,0.508507300585533,0,0,0,0,0,0.120596438625408,0,0,0.295547618953547,0,0.10893846351899,0,0,0,0,0,0,0,0,0,2.04386596391473,0,0,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0.146178634172371,0,0,0.0882561266915003,0,0,0,0,0,0.0801588202515337,0.213452994739353,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0.0984274815147488,0,0,0,0.643012593860077,0.412618309791701,1.24632101408756,1.5748172408605,1.5476039091159,0,1.34173875039706,0.0788057072991982,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0.2506898940227,0,0.327872630709804,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0.235265819698172,0,0.144921028610825,0.447764408660622,0.233713309847224,0.554805861502613,0.189403005275089,0.50313580350515,0,0,0,0,0,0,0,0,0,0,0,0.300515217994437,0,0,0.727394636810238,0.107410557042488,0,0,0,0,0.336749488765919,0,0,0,0,0,0.231522474323834,0,0.358177682162975,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0.127894371303652,0,0.629063767423586,0,0,0.212574920101683,0.371807292777007,0.558644917973244,0,0.0788617450012534,0,0.705351887381368,0.3062454773532,0.0642292250964595,1.41696576325585,0,0,0,0,0,0,0,0.11796972334774,0.366857197043358,0.462102664601353,0,0,0,0,0,0,0.261906694481422,0,0.591424344868181,0,0,0,0.126831620387814,0,0,0,0.351742488719241,0.127762427639595,0,0,0,0,0,0,0.342976018874837,0,0,0.354581522651905,0.111231401892069,0,0,0,0,0.215927591218621,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,1.15981443133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| ||
|short_description=p@chr13:45009703..45009715,+ | |||
}} | }} |
Latest revision as of 16:12, 24 July 2015
Short description: | p@chr13:45009703..45009715, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:45009703..45009715, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.03e-23 | 76 |
bone element | 6.64e-21 | 82 |
skeletal element | 9.67e-19 | 90 |
immune system | 5.03e-18 | 93 |
hematopoietic system | 6.30e-17 | 98 |
blood island | 6.30e-17 | 98 |
skeletal system | 1.61e-16 | 100 |
hemolymphoid system | 4.91e-15 | 108 |
musculoskeletal system | 1.27e-09 | 167 |
lateral plate mesoderm | 3.02e-07 | 203 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 1.58e-07 | 1 |
keratoacanthoma | 1.58e-07 | 1 |