FFCP PHASE1:Hg19::chr13:52026226..52026245,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:52026226..52026245,- to FFCP PHASE1:Hg19::chr13:52026226..52026245,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26512 | |EntrezGene=26512 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14879 | |HGNC=14879 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=141bp_to_ENST00000461515_5end | |||
|cluster_id=chr13:52026226..52026245,- | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_9_at_INTS6_5end | |||
|id=chr13:52026226..52026245,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000511;2.07e-10;1!CL:0002625;2.07e-10;1!CL:0000216;2.07e-10;1!CL:0000097;1.54e-08;5!CL:0000235;5.92e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,1.43e-10,1;CL:0002625,1.43e-10,1;CL:0000216,1.43e-10,1;CL:0000097,1.52e-08,5;CL:0002028,1.52e-08,5;CL:0000235,6.88e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;2.07e-10;1!UBERON:0001343;2.07e-10;1!UBERON:0004910;2.07e-10;1!UBERON:0004813;2.07e-10;1!UBERON:0002331;1.02e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,1.43e-10,1;UBERON:0001343,1.43e-10,1;UBERON:0004910,1.43e-10,1;UBERON:0005154,1.43e-10,1;UBERON:0005295,1.43e-10,1;UBERON:0004813,1.43e-10,1;UBERON:0005297,1.43e-10,1;UBERON:0005294,1.43e-10,1;UBERON:0010141,1.43e-10,1;UBERON:0005891,1.43e-10,1;UBERON:0002331,8.96e-09,10;UBERON:0000358,8.96e-09,10;UBERON:0000307,8.96e-09,10;UBERON:0000091,8.96e-09,10;UBERON:0000087,8.96e-09,10;UBERON:0007010,8.96e-09,10;UBERON:0007806,8.96e-09,10;UBERON:0008780,8.96e-09,10;UBERON:0005728,8.96e-09,10 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0.245733936501509,0,0,0.263766978228454,0.247532705920093,0.331397375727916,0,0,0.730310090387373,0,0,0.408001382488506,0,0,0.410623275218653,0.125542639594803,0.382067028739756,0.0821005894499457,0.157421562627358,0,0.383829398097213,0,0,0,0,0.0774672005803016,0,0,0,0.200544447470142,0,0.223915474239924,0,0,0,0,0,0.232429036905685,0,0.309706370895104,0,0,0,0,0,0,0,0.272906150057846,0.224723484445085,0,0.320929027076094,0,0,0.199463657621632,0,0,0,0,0,0,0.434377689410233,0,0,0,0,0.212604299965044,0.209658645508376,0.112328631146495,0.300353785683013,0,0,0.39783335439818,0.182664153764634,0,0,0,1.70692089026603,0,0.574752439954483,0,0,0.569212969109448,0,0,0,0,0.263384084775077,0,0,0.616804496998528,0.334372990781356,0,0.473447805734733,0,0,0,0,0,0.512365278902701,0.390178042679635,0.164437904603676,0.552700035571697,0,0.14828656316206,0,0,0.226618685395132,0,0,0.253019692019503,0,0,0.950452044448374,0,0.127986611154418,1.24930726552346,0.473554504088034,0,0.604820229674197,0,0.434473211648397,0,0,0.255725123687061,0,0,0.144846518960824,0.795285947051099,0,0.661743720148475,0.221729397462564,0.351339142772504,0.589405839739707,0,0,0.649094787309367,1.0447784237956,0.797747763113191,0.238490624305342,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0,0.258416759169329,0,0,0,0,0,0,0,0.0892997282840798,0.44905874525234,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0.397227542439656,0.286836620748814,0,0.560677600142307,0,0,0.311211035399766,0,0.326923806226917,0,0,0.234321431833797,0,0,0.298897361103602,0.117434498643765,0.161872944368132,0.280901613404497,0.204154171254893,0,0.206651562351531,0,0,0,0,0,0.375355559615893,0.277064115484183,0,0.30648779579902,0,0.226864366320042,0.358779271377724,0,0.211931901159562,0.900273288253207,0.412210116953756,0.257640540045629,0,0,0.68205903612839,0.504867548488229,0.276149695926898,0.161646056818812,0.355009592516614,0.10075209822764,0,0,0.272746120590835,0,0,0,0.232387885739037,0.310983165046111,0,0.36497735907583,0,0,0,0.464367928031979,0,0,0.337169380156203,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0.185176890317059,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0.246217006087397,1.17002132569619,0.297262324577456,0,0,0.141775097242386,0.53735113621709,0,0,41.8763752211552,2.72950145441001,0.621984346622316,0.144119953416961,0.37872730027914,0.126995788584338,0,0,1.71072446022705,0.205654985406647,0.300343057843917,0,0.112131084345361,0.43596006883328,0.07333828582095,0.129271715757778,0,0,0.26593811658487,1.04007436911366,0.257207374262142,1.41849132023278,0,0,0,0,0,0,0,0.301439377059586,0,0,1.2162378064119,0,0,0,0,0,0.579125226670317,1.02738161275192,0,0,0.591092280605782,0.646882724578552,0.641715181398742,0.508189248444927,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0.713715955188647,0.157702415033935,0.117141414992713,0,0,0,1.32845119707087,0.184369168541703,0.434418072340414,0,0,0.413536052245775,0,0.213455115606889,0,0,0,0.496215615637554,0.306923946576125,0,0,1.02341449813341,0.321707842287215,0,0.462629081407967,0,0.574890092096664,0,0.581051892299796,0.241718899183244,0.200506470303285,0,0.114814448164607,0.728364672026868,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0,0.27470839445503,0.165018999841176,0,0,1.6068392984416,0.193341436584244,0.308097234229289,0.15350367472613,0.551346289938122,0.214840489736547,0.870100163485371,0.426133137080504,0.178064071293475,0.165284915360978,0.384380134730212,0.510450849978337,0,0,0.62962469366128,0,0,0.532306030317022,0,0,0.143124886741991,0,0,0.190630193923825,0,0,0.318203247925937,0,0.359744915166629,0.274537029736055,0.117812402345686,0,0,0,0,0.243713489631284,0,0.272999822815972,0.282810863907425,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0,0.0982490410131212,0.35667105148125,0.354761064070598,0,0,0,0.349934720244983,0.0962221127255121,0,0,0.188287601553558,0,0,0,0.229723400206959,0,0,0,0.238231775457789,0.822724546172388,0,0.540031437238115,0,0.106824071127473,0,0,0,0.144269212976445,0.0711418433484141,0,0,0.191505370132367,0,0.324621940274555,0.561594356226918,0,0,0,0.338583555603207,0.1605880751037,0.201799707191048,0,0.343505344755765,0,0.223676107892416,0,0,0,0,0,0.33307196799782,0,0,0.439524537815682,0.121360521749513,0,0,0.23874448473769,0,0,0,0,0,0.16480387422676,0.63337622438398,0.19924798825107,0,0.503865495708552,0.20453736500431,0.123084805461069,0.311039587661807,0.0898683511473268,0.179021174675609,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0.241192877250816,0,0.331737779793674,0.295547618953547,0.658156191461918,0.21787692703798,0.278847488557207,0.153900517007594,0.113942055847001,0,0.0897576444097721,0.108647371922008,0,0.0915975934018623,0,1.02193298195737,0.156980256395025,0.166211681900156,0,0.19606253431774,0.167821586975843,0,0.476809736941136,0,0,0.282706142867882,0.432777279484182,0,0.2653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| ||
|short_description=p9@INTS6 | |||
}} | }} |
Latest revision as of 18:35, 17 September 2015
Short description: | p9@INTS6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_INTS6_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 141bp_to_ENST00000461515_5end |
EntrezGene: | INTS6 |
HGNC: | 14879 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 1.43e-10 | 1 |
seminiferous tubule epithelial cell | 1.43e-10 | 1 |
Sertoli cell | 1.43e-10 | 1 |
mast cell | 1.52e-08 | 5 |
basophil mast progenitor cell | 1.52e-08 | 5 |
macrophage | 6.88e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 1.43e-10 | 1 |
seminiferous tubule of testis | 1.43e-10 | 1 |
epithelium of male gonad | 1.43e-10 | 1 |
epithelial cord | 1.43e-10 | 1 |
sex cord | 1.43e-10 | 1 |
seminiferous tubule epithelium | 1.43e-10 | 1 |
testis sex cord | 1.43e-10 | 1 |
genital ridge | 1.43e-10 | 1 |
primitive sex cord of indifferent gonad | 1.43e-10 | 1 |
coelomic epithelium | 1.43e-10 | 1 |
umbilical cord | 8.96e-09 | 10 |
blastocyst | 8.96e-09 | 10 |
blastula | 8.96e-09 | 10 |
bilaminar disc | 8.96e-09 | 10 |
inner cell mass | 8.96e-09 | 10 |
cleaving embryo | 8.96e-09 | 10 |
connecting stalk | 8.96e-09 | 10 |
inner cell mass derived epiblast | 8.96e-09 | 10 |
extraembryonic mesoderm | 8.96e-09 | 10 |