FFCP PHASE1:Hg19::chr15:39876325..39876356,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:39876325..39876356,+ to FFCP PHASE1:Hg19::chr15:39876325..39876356,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:39876325..39876356,+ | |||
|coexpression_cluster_id=C142 | |||
|description=CAGE_peak_at_chr15:39876325..39876356,+ | |||
|id=chr15:39876325..39876356,+ | |||
|ontology_enrichment_celltype=CL:0002371!5.44e-20!591;CL:0000055!1.52e-18!180;CL:0000144!2.55e-17!625;CL:0000222!3.08e-17!119;CL:0000548!4.67e-16!679;CL:0000004!4.67e-16!679;CL:0000255!4.67e-16!679;CL:0000012!2.09e-15!682;CL:0000220!2.33e-15!246;CL:0002321!8.26e-15!248;CL:0000057!1.01e-14!75;CL:0000115!3.74e-12!35;CL:0002139!1.14e-11!24;CL:0002078!2.17e-11!44;CL:0000003!2.14e-09!722;CL:0000071!4.72e-09!18;CL:0002546!4.72e-09!18;CL:0000680!6.35e-09!57;CL:0000056!6.35e-09!57;CL:0000355!6.35e-09!57;CL:0000213!8.77e-09!57;CL:0000215!8.77e-09!57;CL:0000192!2.59e-08!42;CL:0000514!2.59e-08!42;CL:0000187!4.50e-08!54;CL:0000063!1.45e-07!578;CL:0000359!1.70e-07!32;CL:0000393!7.40e-07!60;CL:0000211!7.40e-07!60;CL:0000183!7.98e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002139;9.11e-14;24!CL:0000115;8.34e-13;36!CL:0000071;4.40e-11;18!CL:0000359;3.48e-08;32!CL:0002078;1.56e-07;45!CL:0002334;1.83e-07;12!CL:0002620;2.50e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.73e-17,76;CL:0000115,3.23e-15,36;CL:0000222,5.10e-15,121;CL:0002139,1.22e-13,24;CL:0002078,4.44e-11,45;CL:0000071,5.78e-11,18;CL:0002546,5.78e-11,18;CL:0002321,9.24e-11,250;CL:0000213,2.90e-09,58;CL:0000215,2.90e-09,58;CL:0000723,4.88e-09,433;CL:0000359,1.00e-08,32;CL:0000048,1.95e-08,427;CL:0000034,3.29e-08,441;CL:0000192,1.05e-07,43;CL:0000514,1.05e-07,43;CL:0002334,2.06e-07,12;CL:0000680,2.21e-07,58;CL:0000056,2.21e-07,58;CL:0000355,2.21e-07,58;CL:0002620,2.62e-07,23;CL:0000349,7.89e-07,19 | |||
|ontology_enrichment_development_v019=CL:0002546;4.40e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!1.56e-19!84;UBERON:0000055!6.61e-19!69;UBERON:0002049!9.37e-19!79;UBERON:0007798!9.37e-19!79;UBERON:0001981!2.10e-18!60;UBERON:0007500!2.10e-18!60;UBERON:0004537!2.10e-18!60;UBERON:0006965!2.10e-18!60;UBERON:0001009!1.18e-16!113;UBERON:0004535!1.88e-16!110;UBERON:0000468!7.00e-15!659;UBERON:0000467!1.72e-14!625;UBERON:0000480!2.75e-14!626;UBERON:0001637!3.51e-14!42;UBERON:0003509!3.51e-14!42;UBERON:0004572!3.51e-14!42;UBERON:0003914!9.80e-14!118;UBERON:0000490!3.54e-13!138;UBERON:0004573!2.16e-10!33;UBERON:0004571!2.16e-10!33;UBERON:0000926!4.65e-10!448;UBERON:0004120!4.65e-10!448;UBERON:0006603!4.65e-10!448;UBERON:0000486!8.01e-10!82;UBERON:0003102!1.06e-09!95;UBERON:0000914!1.19e-09!83;UBERON:0002329!1.19e-09!83;UBERON:0003077!1.19e-09!83;UBERON:0003059!1.19e-09!83;UBERON:0007282!1.19e-09!83;UBERON:0009618!1.19e-09!83;UBERON:0007285!1.19e-09!83;UBERON:0001986!4.72e-09!18;UBERON:0004638!4.72e-09!18;UBERON:0004852!4.72e-09!18;UBERON:0005256!7.02e-09!143;UBERON:0003081!3.73e-08!216;UBERON:0000487!5.90e-08!22;UBERON:0004290!6.11e-08!70;UBERON:0002199!7.89e-08!45;UBERON:0002416!7.89e-08!45;UBERON:0001134!8.49e-08!61;UBERON:0002036!8.49e-08!61;UBERON:0003082!8.49e-08!61;UBERON:0002385!1.03e-07!63;UBERON:0001015!1.03e-07!63;UBERON:0000383!1.03e-07!63;UBERON:0002100!1.10e-07!216;UBERON:0006914!1.77e-07!25;UBERON:0002097!2.44e-07!40;UBERON:0000923!4.09e-07!604;UBERON:0005291!4.09e-07!604;UBERON:0006598!4.09e-07!604;UBERON:0002532!4.09e-07!604;UBERON:0002050!5.65e-07!605;UBERON:0005423!5.65e-07!605;UBERON:0004923!6.29e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;4.97e-14;42!UBERON:0003509;4.97e-14;42!UBERON:0004572;4.97e-14;42!UBERON:0007500;1.19e-12;56!UBERON:0001981;1.19e-12;56!UBERON:0004537;1.19e-12;56!UBERON:0004573;1.02e-11;33!UBERON:0004571;1.02e-11;33!UBERON:0004638;4.40e-11;18!UBERON:0001986;4.40e-11;18!UBERON:0004852;4.40e-11;18!UBERON:0000055;6.59e-11;65!UBERON:0000487;2.83e-10;22!UBERON:0006914;2.52e-08;25!UBERON:0003914;5.10e-08;74!UBERON:0002097;5.65e-08;41!UBERON:0000490;1.46e-07;33!UBERON:0003688;1.77e-07;6!UBERON:0002358;1.77e-07;6!UBERON:0003684;1.77e-07;6!UBERON:0001178;1.77e-07;6!UBERON:0002049;2.10e-07;75!UBERON:0007798;2.10e-07;75!UBERON:0002199;2.77e-07;46!UBERON:0002416;2.77e-07;46!UBERON:0000947;8.42e-07;21!UBERON:0010191;8.42e-07;21 | |||
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|phase1_expression=21.6197271331962,40.4649990153958,11.4173067317737,38.0278533741896,14.3027550216732,53.2126499701225,2.53299878168311,0,0.261185628199839,1.47440361900905,4.18680700783456,4.36882744260345,5.27533956456907,0.123766352960047,1.32558950291166,11.4295274896802,9.04041792035965,6.57279081348636,7.3189919818576,0.369363174230364,0.816002764977012,0.313454721478088,0.286235987131057,1.36874425072884,0.753255837568817,0,0,0,0,0,0.309632246632152,1.83884244895785,1.8072355126695,0.739508020333575,0,0,0,0,5.21415563422368,0.217010870715852,0,0,0,1.59938062657521,0.377875943688809,0.242584061187816,4.41615170120801,0,0.309706370895104,7.19230980805376,0.256160706529101,0.236482229888585,6.20542225325913,0,0,4.1413314699373,0.272906150057846,0.224723484445085,6.42776173978895,2.24650318953266,0,1.9791078011203,0.797854630486527,0,17.9929727949722,0.56738522469114,0,6.78371396193207,1.5644487552606,0.434377689410233,11.502590550034,1.10483290796269,0,0,0,0,0.22465726229299,1.80212271409808,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,1.66221330396589,1.44575660953827,5.51471701699479,1.59331170856906,0,4.37971383272372,0.0945348171640679,0.221729397462564,0.263504357079378,0,1.09288586487763,0.370784442784429,0,0,0,0,0,0,3.18019851786728,0.860234595106124,1.04142150482278,2.26123176769604,3.35599548967925,9.90424950984243,8.35979866147242,4.13466814670926,0.71153252537342,3.68192674041137,7.25092770796465,3.80136052859256,5.12530320851156,8.82391392830085,18.6332648012805,2.76829157680647,1.57170560838319,2.13961812918312,3.06633274931766,9.49265659568129,4.03043836646896,0,0,1.3082821564276,19.8788780678127,8.35761376986227,5.42877641334197,6.59724227722272,1.41867352879343,0.560677600142307,4.2699598291882,9.12669929143492,0.622422070799533,1.0776853765575,3.10577615915572,0.756787138224657,1.15235184896,0,0,0,0.747243402759005,0,0.161872944368132,0.140450806702248,0.61246251376468,1.10550885580591,1.44656093646072,11.8800285728205,20.5231551301202,0,0,0,0.250237039743928,0.554128230968366,6.14568669233173,17.4698043605441,9.16452159330241,1.36118619792025,20.6298081042191,12.813443329114,13.1397778718928,9.00273288253207,5.97704669582946,13.1396675423271,8.37525853492154,7.08860595413318,7.69752340773469,10.0973509697646,8.00834118188004,8.40559495457822,15.2654124782144,4.53384442024381,6.27374191548804,1.15956511897978,1.90922284413584,1.43402297694502,0,0,0,0,0,0,12.5159625863853,22.513432836751,8.28809528114883,8.8229906326076,2.16563844500876,0.473227200159376,0.505754070234305,0,0.661763836394364,0.653638332277218,0.474541238222193,0.134831308160164,0.392442930250692,0.769494313892781,5.16708818237254,5.60967095213783,0,1.47008711385542,0,0,0.590789906681404,0,0,0.686271241194102,3.07300799144152,1.1240175325762,1.10581869652794,1.66659201285353,0,1.03993478527958,1.44331342025273,0,0.117408694235822,6.6408565970094,9.72269576410883,11.0347408296067,0,0,0,0,0,0.93733833986777,6.71928512795438,1.84307626415102,2.23896306757121,2.61570544662566,2.30029607499127,1.47798971368783,0,0,0,0,0,0,0,0,0.308482478109971,0,0,0.224262168690721,0.87192013766656,0,0.904902010304444,0,0,2.92531928243358,5.2003718455683,0.257207374262142,0,0.532844358032199,0.285955987316295,0,1.64648067356154,0,0.710783897485092,0,0,0.871533458600294,0,0,0,0,4.31324739884849,1.14861935834114,0,2.31650090668127,2.4657158706046,1.61154866915906,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0.858840442033979,0.500170521059677,0.813795071099207,16.221727199403,36.2210847258238,15.7702415033935,13.3541213091693,2.40756879782175,2.27407504055985,1.03473071292505,0.664225598535437,1.65932251687533,3.82287903659565,0,0,0.206768026122887,0,0.426910231213777,1.5156378572313,1.66435439510497,4.5358543999452,22.8259183193275,32.8408622836454,43.2216545426933,11.2762451345017,20.4682899626681,20.911009748669,8.90508398669946,2.62156479464514,3.9063579568888,0.0821271560138091,0.519254429183621,1.04589340613963,0.241718899183244,9.82481704486096,0.460404944679482,2.18147451512753,0.728364672026868,2.62248829918848,0,0.0770153371044148,0,0,0,4.54933536283586,3.57196781080683,1.72732732881711,15.4227252690289,0,0,0.509752546090077,0.831076008928724,0.671624264166535,0,0,0,0.328014645699706,0,0.206082023295445,0.27470839445503,0,2.29706215198469,8.45078319847478,3.21367859688319,0.096670718292122,0.308097234229289,0.614014698904518,1.10269257987624,0.107420244868274,1.45016693914229,0.426133137080504,0.178064071293475,3.14041339185858,2.69066094311149,3.95599408733211,0.50578890427775,0,10.3888074454111,0,0.616067160352178,1.59691809095107,0,2.7798632865588,1.71749864090389,0,0.949138274156178,0,0.255897791311334,0,1.27281299170375,3.13979456079692,0.899362287916574,1.37268514868027,0.589062011728432,1.01091240786658,4.75530963519025,2.52755073743389,0,2.43713489631284,17.9605249486484,1.22849920267187,2.54529777516683,2.26016233240486,1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| ||
|short_description=p@chr15:39876325..39876356,+ | |||
}} | }} |
Latest revision as of 01:14, 25 July 2015
Short description: | p@chr15:39876325..39876356, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:39876325..39876356, + |
Coexpression cluster: | C142_Preadipocyte_Fibroblast_hepatic_Ewing_Adipocyte_Olfactory_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.73e-17 | 76 |
endothelial cell | 3.23e-15 | 36 |
mesodermal cell | 5.10e-15 | 121 |
endothelial cell of vascular tree | 1.22e-13 | 24 |
meso-epithelial cell | 4.44e-11 | 45 |
blood vessel endothelial cell | 5.78e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.78e-11 | 18 |
embryonic cell | 9.24e-11 | 250 |
lining cell | 2.90e-09 | 58 |
barrier cell | 2.90e-09 | 58 |
somatic stem cell | 4.88e-09 | 433 |
vascular associated smooth muscle cell | 1.00e-08 | 32 |
multi fate stem cell | 1.95e-08 | 427 |
stem cell | 3.29e-08 | 441 |
smooth muscle cell | 1.05e-07 | 43 |
smooth muscle myoblast | 1.05e-07 | 43 |
preadipocyte | 2.06e-07 | 12 |
muscle precursor cell | 2.21e-07 | 58 |
myoblast | 2.21e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.21e-07 | 58 |
skin fibroblast | 2.62e-07 | 23 |
extraembryonic cell | 7.89e-07 | 19 |