FFCP PHASE1:Hg19::chr16:56700737..56700752,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:56700737..56700752,+ | |||
|coexpression_cluster_id=C129 | |||
|description=CAGE_peak_at_chr16:56700737..56700752,+ | |||
|id=chr16:56700737..56700752,+ | |||
|ontology_enrichment_celltype=CL:0000349!9.31e-07!3;CL:0002577!9.31e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000182;4.18e-10;12!CL:0000039;5.00e-10;7!CL:0000586;5.00e-10;7!CL:0000817;1.01e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.44e-10,12;CL:0000039,5.57e-10,7;CL:0000586,5.57e-10,7 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.65e-08;1!UBERON:0009117;3.68e-07;10!UBERON:0005564;3.68e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.39e-14!115;UBERON:0002020!5.37e-11!34;UBERON:0003528!5.37e-11!34;UBERON:0001893!7.60e-11!34;UBERON:0001869!2.31e-10!32;UBERON:0002791!8.38e-10!33;UBERON:0001049!1.93e-08!57;UBERON:0005068!1.93e-08!57;UBERON:0006241!1.93e-08!57;UBERON:0007135!1.93e-08!57;UBERON:0001950!2.23e-08!20;UBERON:0002780!2.30e-08!41;UBERON:0001890!2.30e-08!41;UBERON:0006240!2.30e-08!41;UBERON:0005743!3.09e-08!86;UBERON:0003080!4.45e-08!42;UBERON:0001017!4.83e-08!82;UBERON:0002616!5.38e-08!59;UBERON:0000073!1.07e-07!94;UBERON:0001016!1.07e-07!94;UBERON:0000200!1.12e-07!6;UBERON:0002619!1.89e-07!22;UBERON:0002308!6.13e-07!9;UBERON:0000125!6.13e-07!9;UBERON:0000955!7.05e-07!69;UBERON:0006238!7.05e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;8.70e-14;19!UBERON:0006925;8.70e-14;19!UBERON:0002423;2.34e-10;25!UBERON:0002368;2.65e-09;33!UBERON:0000473;7.78e-09;8!UBERON:0000941;1.65e-08;1!UBERON:0001785;1.65e-08;1!UBERON:0002464;1.65e-08;1!UBERON:0004904;1.65e-08;1!UBERON:0001021;1.65e-08;1!UBERON:0002365;2.70e-08;31!UBERON:0002330;2.70e-08;31!UBERON:0005409;5.28e-08;22!UBERON:0000922;6.71e-08;49!UBERON:0000949;1.78e-07;43!UBERON:0000160;6.34e-07;17!UBERON:0002108;7.16e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,9.32e-14,19;UBERON:0006925,9.32e-14,19;UBERON:0008836,9.32e-14,19;UBERON:0008835,8.18e-12,22;UBERON:0003894,8.18e-12,22;UBERON:0009854,2.81e-11,23;UBERON:0007499,2.46e-10,25;UBERON:0009497,2.46e-10,25;UBERON:0000015,2.46e-10,25;UBERON:0002423,2.46e-10,25;UBERON:0006235,2.46e-10,25;UBERON:0004161,2.46e-10,25;UBERON:0009856,6.43e-10,26;UBERON:0002368,1.08e-09,35;UBERON:0000949,1.34e-09,45;UBERON:0000473,8.55e-09,8;UBERON:0000941,1.53e-08,1;UBERON:0001785,1.53e-08,1;UBERON:0002464,1.53e-08,1;UBERON:0004904,1.53e-08,1;UBERON:0001021,1.53e-08,1;UBERON:0003902,1.53e-08,1;UBERON:0005425,1.53e-08,1;UBERON:0002365,3.10e-08,31;UBERON:0002330,3.10e-08,31;UBERON:0005409,4.55e-07,25;UBERON:0000160,6.29e-07,17;UBERON:0002108,7.05e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0.486634870302636,0,0,0,1.70272798147026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310983165046111,0.252320850875628,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,4.91413608338813,7.68026878685825,0,0,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,3.7440682422278,6.53977114070404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65147236858747,0,0,0.904318131178758,0,0,0,0,0,0,0,0,0,0,0,0.448340575974109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,3.32870879020994,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.59684583357601,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27753871307098,0.687010689511529,0.307240764308458,0,0.166849141711909,0.976940477010201,0,0,0,0,0,1.49712432326576,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0.166211681900156,0,0,0,0,0.476809736941136,0,0,0,0,5.97157158647103,0.530745387020035,19.552964637876,0,0,0,0.067401132980677,0,0,0,0,0,0,12.0990716048664,0,0.568679216656392,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0.52418000472609,0,0,0,0,0.678923115418936,0,0.225980740780532,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0.321506296930038,0.412618309791701,0.415440338029185,0,0,0.121499113316049,0,1.10327990218877,0.734364233889974,0,0,0,0,0,0,0,0,0,0,0,0,0,4.10346254298631,152.382922249055,0.258565912723101,0.52893040697076,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0.886068179966986,0,0.1251909307065,0,0,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0.205116364240755,0,0.0691572524642179,0.484426936895553,1.42769420259154,0,0,0,0,0,0,0,0,0.20170506870352,10.9411961572633,0,0,0,0.337687923091973,0,0,0.253663240775627,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0.135939465953663,0.263091094251396,0,0,0,0,0.840816489941367,0.913158720509496,0,0,0.571812353413251,0,0,0,0,0,0,0,0,0,0,0,3.2074961596167,0,0,0,0.196300467230486,0.121917924982269,0,0,0,0,0,0,0,0,0,0.301925687133347,0.617393264863557,3.71551252856727,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,1.46067277649303,0,0,0,0.475940431336403,0,2.645134202577,0,0,0,0.252332849670158,0.109265571963696,0,2.65170957329153,1.06886962106224,0.735159196278759,3.50990555009325,0.0757786982182394,0,0,0,0,0.23806443146374,0,0,0,2.80047496423926,0.808468755832877,0,0,0,0.430333232356058,0,0,0,0,0,0,0,0,0,0,0 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| ||
|short_description=p@chr16:56700737..56700752,+ | |||
}} | }} |
Latest revision as of 10:23, 25 July 2015
Short description: | p@chr16:56700737..56700752, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:56700737..56700752, + |
Coexpression cluster: | C129_liver_Hepatocyte_colon_duodenum_temporal_testicular_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.44e-10 | 12 |
germ line cell | 5.57e-10 | 7 |
germ cell | 5.57e-10 | 7 |
Ontology term | p-value | n |
---|---|---|
liver | 9.32e-14 | 19 |
digestive gland | 9.32e-14 | 19 |
liver bud | 9.32e-14 | 19 |
hepatic diverticulum | 8.18e-12 | 22 |
liver primordium | 8.18e-12 | 22 |
digestive tract diverticulum | 2.81e-11 | 23 |
epithelial sac | 2.46e-10 | 25 |
epithelium of foregut-midgut junction | 2.46e-10 | 25 |
anatomical boundary | 2.46e-10 | 25 |
hepatobiliary system | 2.46e-10 | 25 |
foregut-midgut junction | 2.46e-10 | 25 |
septum transversum | 2.46e-10 | 25 |
sac | 6.43e-10 | 26 |
endocrine gland | 1.08e-09 | 35 |
endocrine system | 1.34e-09 | 45 |
testis | 8.55e-09 | 8 |
cranial nerve II | 1.53e-08 | 1 |
cranial nerve | 1.53e-08 | 1 |
nerve trunk | 1.53e-08 | 1 |
nerve connecting eye with brain | 1.53e-08 | 1 |
nerve | 1.53e-08 | 1 |
retinal neural layer | 1.53e-08 | 1 |
presumptive neural retina | 1.53e-08 | 1 |
exocrine gland | 3.10e-08 | 31 |
exocrine system | 3.10e-08 | 31 |
gastrointestinal system | 4.55e-07 | 25 |
intestine | 6.29e-07 | 17 |
small intestine | 7.05e-07 | 4 |