FFCP PHASE1:Hg19::chr17:46668194..46668198,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-420bp_to_ENST00000429755,ENST00000487849,ENST00000492897_5end | |||
|cluster_id=chr17:46668194..46668198,+ | |||
|coexpression_cluster_id=C2414 | |||
|description=CAGE_peak_1_at_ENST00000429755_5end,CAGE_peak_1_at_ENST00000487849_5end,CAGE_peak_1_at_ENST00000492897_5end | |||
|id=chr17:46668194..46668198,+ | |||
|ontology_enrichment_celltype=CL:0002504!9.29e-09!3;CL:1000279!9.29e-09!3;CL:1000280!9.29e-09!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;5.96e-34;2!UBERON:0003918;5.73e-08;10!UBERON:0007687;5.73e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!1.58e-10!32;UBERON:0004457!1.65e-10!12;UBERON:0000042!1.65e-10!12;UBERON:0006947!2.07e-10!3;UBERON:0004054!2.07e-10!3;UBERON:0002113!5.47e-09!27;UBERON:0003918!5.47e-09!27;UBERON:0005095!5.47e-09!27;UBERON:0007687!5.47e-09!27;UBERON:0002106!1.36e-08!3;UBERON:0004854!1.36e-08!3;UBERON:0009034!1.36e-08!3;UBERON:0002095!1.36e-08!3;UBERON:0004782!1.36e-08!3;UBERON:0003281!1.36e-08!3;UBERON:0009664!1.36e-08!3;UBERON:0002296!1.36e-08!3;UBERON:0005602!1.36e-08!3;UBERON:0001179!1.36e-08!3;UBERON:0006293!1.36e-08!3;UBERON:0002417!3.40e-08!61;UBERON:0000916!3.40e-08!61;UBERON:0006554!4.91e-08!44;UBERON:0005904!6.98e-08!4;UBERON:0001008!8.55e-08!45;UBERON:0003887!1.51e-07!21;UBERON:0005172!4.88e-07!55;UBERON:0005173!4.88e-07!55;UBERON:0009569!7.70e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;3.34e-66;1!UBERON:0006947;3.66e-23;3!UBERON:0004054;3.66e-23;3!UBERON:0005904;9.45e-18;4!UBERON:0000058;6.34e-08;10!UBERON:0003135;2.55e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,4.66e-66,1;UBERON:0006947,4.09e-23,3;UBERON:0004054,4.09e-23,3;UBERON:0005904,1.03e-17,4;UBERON:0002113,2.77e-11,26;UBERON:0003918,2.77e-11,26;UBERON:0011143,2.77e-11,26;UBERON:0005095,2.77e-11,26;UBERON:0007687,2.77e-11,26;UBERON:0000489,1.20e-09,31;UBERON:0005103,1.47e-09,8;UBERON:0000083,1.47e-09,8;UBERON:0009201,1.47e-09,8;UBERON:0006553,1.47e-09,8;UBERON:0003074,1.47e-09,8;UBERON:0003060,1.47e-09,8;UBERON:0000080,1.21e-08,9;UBERON:0002120,1.21e-08,9;UBERON:0004875,1.21e-08,9;UBERON:0005721,1.21e-08,9;UBERON:0005754,1.21e-08,9;UBERON:0007297,1.21e-08,9;UBERON:0003135,2.63e-07,11;UBERON:0004876,2.63e-07,11;UBERON:0003887,8.38e-07,12;UBERON:0006554,1.00e-06,47 | |||
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| ||
|short_description=p1@ENST00000429755,p1@ENST00000487849,p1@ENST00000492897 | |||
}} | }} |
Latest revision as of 18:09, 25 July 2015
Short description: | p1@ENST00000429755, p1@ENST00000487849, p1@ENST00000492897 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000429755_5end, CAGE_peak_1_at_ENST00000487849_5end, CAGE_peak_1_at_ENST00000492897_5end |
Coexpression cluster: | C2414_kidney_smallcell_seminal_somatostatinoma_ductus_small_Fibroblast |
Association with transcript: | -420bp_to_ENST00000429755, ENST00000487849, ENST00000492897_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epididymis | 4.66e-66 | 1 |
male genital duct | 4.09e-23 | 3 |
internal male genitalia | 4.09e-23 | 3 |
duct of male reproductive system | 1.03e-17 | 4 |
kidney | 2.77e-11 | 26 |
kidney mesenchyme | 2.77e-11 | 26 |
upper urinary tract | 2.77e-11 | 26 |
kidney rudiment | 2.77e-11 | 26 |
kidney field | 2.77e-11 | 26 |
cavitated compound organ | 1.20e-09 | 31 |
mesonephric epithelium | 1.47e-09 | 8 |
mesonephric tubule | 1.47e-09 | 8 |
nephric duct | 1.47e-09 | 8 |
renal duct | 1.47e-09 | 8 |
mesonephric duct | 1.47e-09 | 8 |
pronephric duct | 1.47e-09 | 8 |
mesonephros | 1.21e-08 | 9 |
pronephros | 1.21e-08 | 9 |
nephrogenic cord | 1.21e-08 | 9 |
pronephric mesoderm | 1.21e-08 | 9 |
rostral part of nephrogenic cord | 1.21e-08 | 9 |
presumptive pronephric mesoderm | 1.21e-08 | 9 |
male reproductive organ | 2.63e-07 | 11 |
urogenital ridge | 2.63e-07 | 11 |
intraembryonic coelom | 8.38e-07 | 12 |
urinary system structure | 1.00e-06 | 47 |