FFCP PHASE1:Hg19::chr17:60143234..60143245,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:60143234..60143245,- to FFCP PHASE1:Hg19::chr17:60143234..60143245,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:60143234..60143245,- | |||
|coexpression_cluster_id=C621 | |||
|description=CAGE_peak_at_chr17:60143234..60143245,- | |||
|id=chr17:60143234..60143245,- | |||
|ontology_enrichment_celltype=CL:0000738!1.59e-30!140;CL:0000037!1.47e-25!172;CL:0000566!1.47e-25!172;CL:0000988!1.85e-24!182;CL:0002032!1.80e-23!165;CL:0000837!1.80e-23!165;CL:0002031!1.03e-22!124;CL:0002087!5.35e-22!119;CL:0002057!1.76e-21!42;CL:0000860!2.20e-20!45;CL:0000766!4.10e-20!76;CL:0000557!3.25e-17!71;CL:0000763!6.99e-17!112;CL:0000049!6.99e-17!112;CL:0002009!2.88e-16!65;CL:0000839!6.09e-16!70;CL:0002194!4.55e-15!63;CL:0000576!4.55e-15!63;CL:0000040!4.55e-15!63;CL:0000559!4.55e-15!63;CL:0000094!8.34e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.68e-38;33!CL:0002057;2.68e-38;33!CL:0000473;4.76e-25;39!CL:0000234;4.76e-25;39!CL:0000576;1.87e-21;48!CL:0000766;1.06e-19;69!CL:0000094;3.33e-18;8!CL:0000081;2.32e-16;11!CL:0002087;8.89e-16;104!CL:0000738;2.09e-13;136!CL:0000453;1.30e-11;5!CL:0000763;4.92e-10;100!CL:0000988;9.78e-10;177!CL:0000775;2.31e-08;3!CL:0000623;5.16e-08;3!CL:0000767;2.89e-07;3!CL:0000451;3.14e-07;10!CL:0000542;9.99e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.26e-62,136;CL:0000988,6.70e-51,177;CL:0000037,4.53e-49,168;CL:0002032,2.33e-46,161;CL:0000837,2.33e-46,161;CL:0000766,5.52e-42,72;CL:0002031,6.84e-42,120;CL:0000860,1.25e-40,42;CL:0002057,1.25e-40,42;CL:0002087,3.71e-38,115;CL:0000473,1.94e-34,48;CL:0000234,1.94e-34,48;CL:0000763,5.05e-34,108;CL:0000049,5.05e-34,108;CL:0000557,8.60e-34,67;CL:0002009,5.27e-29,61;CL:0000839,5.52e-28,66;CL:0002194,8.38e-26,59;CL:0000576,8.38e-26,59;CL:0000040,8.38e-26,59;CL:0000559,8.38e-26,59;CL:0000134,9.47e-19,354;CL:0000094,3.91e-18,8;CL:0002320,4.92e-18,361;CL:0000081,2.80e-16,11;CL:0000219,1.61e-15,386;CL:0000034,3.66e-14,441;CL:0000048,9.10e-14,427;CL:0000723,2.53e-13,433;CL:0000453,9.85e-12,5;CL:0000838,2.56e-11,52;CL:0000542,5.18e-11,53;CL:0000051,5.18e-11,53;CL:0000775,2.35e-08,3;CL:0000623,4.28e-08,3;CL:0000825,4.28e-08,3;CL:0000451,2.63e-07,10;CL:0000767,3.71e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;3.08e-30;42!CL:0000049;3.03e-08;108!CL:0000051;9.99e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.78e-15!102;UBERON:0003061!2.78e-15!102;UBERON:0002193!4.40e-15!112;UBERON:0002371!2.11e-14!80;UBERON:0001474!1.50e-13!86;UBERON:0002405!3.18e-12!115;UBERON:0004765!8.63e-11!101;UBERON:0001434!8.63e-11!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.14e-29,98;UBERON:0003061,4.14e-29,98;UBERON:0002371,1.27e-28,76;UBERON:0001474,8.31e-26,82;UBERON:0002193,2.34e-25,108;UBERON:0002405,5.60e-23,93;UBERON:0004765,1.21e-22,90;UBERON:0001434,2.08e-19,100;UBERON:0002384,4.65e-17,371;UBERON:0002204,1.22e-08,167;UBERON:0003081,1.62e-08,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0.487932798790507,0,0,0,0,0.136874425072884,0.376627918784408,1.98674854944673,1.72411237844886,1.49550484495991,1.18009283054671,1.53531759238885,3.09632246632152,0,0,0,0.232401601740905,0.142169232487422,0.293600439334847,5.53995408531877,7.42014455639524,8.68043482863407,0.223915474239924,0,0,1.30858414901608,0.377875943688809,0.485168122375632,2.09186133215116,2.87817521615278,1.85823822537062,1.1507695692886,3.84241059793651,1.6553756092201,5.17118521104928,6.45484683583826,5.41705946377367,2.63539275359647,1.63743690034707,2.24723484445085,9.79468455586888,4.49300637906531,3.83602275479425,0.989553900560148,1.59570926097305,0.852449501065388,7.54544020434318,3.97169657283798,5.60540024096017,1.50749199154046,2.60741459210101,1.3031330682307,3.02699751316684,4.78760926783834,3.16462387440884,0.211255286311942,0.212604299965044,0.209658645508376,0.336985893439485,0.300353785683013,0.32145117339416,0,0.99458338599545,0.365328307529268,0,0,0,2.13365111283254,0,0.574752439954483,0.661044872784862,0,5.12291672198504,4.11066032559657,4.96955196562797,2.64342657158052,1.68152568894461,0.790152254325231,3.34406609193516,2.75107533924415,2.46721798799411,0,0,0.473447805734733,0,0.222820913770347,0.294605907474837,0.221533894583621,0.270803863765016,0.25618263945135,0.130059347559878,0.164437904603676,0.276350017785848,0.289803085735052,0.14828656316206,0,0,0.113309342697566,0,0.34362744548263,0.253019692019503,0,0.651083453856419,0,0,0.127986611154418,0,0.236777252044017,0,2.41928091869679,5.61624411145365,4.48955652036677,0,0,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0.614843499851882,0.654895377488563,0,0,0.649094787309367,0.522389211897802,0.531831842075461,0.715471872916026,5.71994910780128,0,0,0,0,0,0,0,0,0,0.71153252537342,0.33472061276467,0,0,0,0,0,0.17859945656816,0,0.225222960966644,0,0,0.549605231791222,3.9534125230819,3.87780264148325,0,0,0.12663051166458,0.132409180813219,0,0,0.560677600142307,0,0,0.311211035399766,0.269421344139376,0.163461903113459,0,0,0,0,0.570471821544449,0,0,0.161872944368132,0,0.204154171254893,0,0,0,0.247266929278557,0,0,0,0,0.277064115484183,0,0,0.150238058906597,0,0,0.213557388818567,0,0.300091096084402,0,0,0.18611685633159,0,0.0974370051611986,0.757301322732344,0.0920498986422993,0,0,0.10075209822764,0,0,0.272746120590835,0,0.487894824518382,0.397589304964456,0.232387885739037,0,0.756962552626885,0.36497735907583,0,0,1.38134921352481,0,0,0,0.168584690078102,0,0.220587945464788,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0.982827216677626,0,0.441463099414651,0.122988438543114,0.171567810298526,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,1.03993478527958,0,0.231860809950154,0.117408694235822,0.577465791044295,0,0.190254152234598,0.790204397959275,0.858486162094873,0,0,0,0,0.16798212819886,0.567100388969546,0,0,0,0,0,2.28060927094849,2.59415916150531,4.29224273649692,0.063497894292169,0,0,0,0,0.300343057843917,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.537182889719687,0.224170287987055,1.57624608161542,4.74380664690938,6.28880877770767,0,1.30139853857622,0,0.167516265334349,1.27587750330633,4.49404214368309,11.966458368161,2.48649308061621,0,0,0,0,0.535286966391485,0.473107245101804,0,0,0,0,0,0,0,0.195801157462741,0,0.82707210449155,1.94142780736755,1.921096040462,0.606255142892519,0,0.604780586659361,0.248107807818777,0.153461973288062,0,0,0.511707249066704,0,0,0,0.177561725313127,0.0821271560138091,0,0,0.241718899183244,0,0,0,0,0.131124414959424,0,0,0.784349769176855,0,0,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0,0.438519753291869,0.261435451024901,0,0.328014645699706,0,0.309123034943167,0.183138929636687,0.330037999682352,0,0,0,0,0,0,0,0.107420244868274,0,0.0852266274161009,0.0890320356467374,0,0,0.638063562472921,0.10115778085555,0,0,0,0.308033580176089,0,0,0,0.143124886741991,0,0,0,0.255897791311334,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0.143411352204052,0.0982490410131212,0.7133421029625,0,0,0,0,0,0,0,0,0,0,1.68471475667626,0,0,0.507447609232169,0,0,0.476463550915578,0,0,0,0,0.747768497892312,0,0.245040215981032,0.185803175125719,0.144269212976445,0.213425530045242,0.318852545457645,0.199579371432817,0.766021480529467,0.211673582723883,0,0,0.456469358066384,0.156679895773023,0,0.677167111206413,0,0,0,0,0.614481528616916,0.447352215784832,0.166849141711909,0,0,0,0,0,0,0,0.146508179271894,0.121360521749513,1.11443384277478,0,0.47748896947538,0,0,0,0.281338832821026,0.111308705022906,0,0.211125408127993,0.19924798825107,0.552567831062295,0,0,0.984678443688556,0.622079175323615,0.179736702294654,0.358042349351218,0,0.394573622547734,0,0,0,0.278304294485554,0,0.7812832832557,0.0874599999961957,0,0,0,0,0,0,0.347249989866585,0,0.241192877250816,0,0.221158519862449,0,0.438770794307945,0,0.139423744278603,0.230850775511391,0.227884111694002,0,0.44878822204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| ||
|short_description=p@chr17:60143234..60143245,- | |||
}} | }} |
Latest revision as of 19:37, 25 July 2015
Short description: | p@chr17:60143234..60143245, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:60143234..60143245, - |
Coexpression cluster: | C621_Neutrophils_CD14_CD4_CD8_Natural_CD19_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.14e-29 | 98 |
blood island | 4.14e-29 | 98 |
bone marrow | 1.27e-28 | 76 |
bone element | 8.31e-26 | 82 |
hemolymphoid system | 2.34e-25 | 108 |
immune system | 5.60e-23 | 93 |
skeletal element | 1.21e-22 | 90 |
skeletal system | 2.08e-19 | 100 |
connective tissue | 4.65e-17 | 371 |
musculoskeletal system | 1.22e-08 | 167 |
lateral plate mesoderm | 1.62e-08 | 203 |