FFCP PHASE1:Hg19::chr17:7165787..7165807,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:7165787..7165807,- to FFCP PHASE1:Hg19::chr17:7165787..7165807,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1366 | |EntrezGene=1366 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2049 | |HGNC=2049 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc002gfm.3,uc010cmc.2_5end | |||
|cluster_id=chr17:7165787..7165807,- | |||
|coexpression_cluster_id=C1334 | |||
|description=CAGE_peak_1_at_CLDN7_5end | |||
|id=chr17:7165787..7165807,- | |||
|ontology_enrichment_celltype=CL:0000066!1.16e-28!254;CL:0002076!2.30e-18!43;CL:0000223!4.44e-16!59;CL:0002368!1.10e-09!13;CL:0002251!2.96e-08!21;CL:0002202!9.11e-07!9;CL:0002632!9.11e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002076;2.10e-17;42!CL:0002368;4.24e-11;13!CL:0002251;2.30e-10;20!CL:1000507;4.26e-09;10!CL:1000494;4.26e-09;10!CL:1000449;8.59e-08;15!CL:0002202;1.04e-07;9!CL:0002632;1.04e-07;9!CL:0000039;7.04e-07;7!CL:0000586;7.04e-07;7!CL:0002159;7.59e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.96e-30,253;CL:0002076,1.38e-22,42;CL:0000223,2.28e-18,58;CL:0002368,4.20e-11,13;CL:0002251,2.24e-10,20;CL:1000507,4.45e-09,10;CL:1000494,4.45e-09,10;CL:1000449,9.08e-08,15;CL:0002202,1.03e-07,9;CL:0002632,1.03e-07,9;CL:0000039,7.04e-07,7;CL:0000586,7.04e-07,7;CL:0002159,7.62e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000223;4.83e-10;58!UBERON:0006595;3.40e-07;86 | |||
|ontology_enrichment_disease=DOID:305!3.06e-17!106;DOID:1749!2.61e-11!14;DOID:0050687!5.24e-11!143;DOID:299!3.85e-09!25 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.88e-11;14!DOID:299;5.29e-09;25!DOID:305;2.10e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.01e-18,106;DOID:0050687,1.70e-12,143;DOID:1749,1.82e-11,14;DOID:299,5.30e-09,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!5.74e-25!169;UBERON:0000925!5.74e-25!169;UBERON:0006595!5.74e-25!169;UBERON:0001007!1.03e-19!155;UBERON:0001555!1.03e-19!155;UBERON:0007026!1.03e-19!155;UBERON:0000466!3.13e-17!126;UBERON:0004921!3.43e-17!129;UBERON:0004185!3.43e-17!129;UBERON:0000464!4.04e-17!104;UBERON:0000077!8.37e-16!130;UBERON:0005911!7.43e-13!82;UBERON:0001004!9.89e-12!72;UBERON:0005177!4.50e-10!107;UBERON:0001041!5.52e-10!98;UBERON:0001008!6.94e-10!45;UBERON:0002553!8.21e-10!70;UBERON:0006554!1.60e-09!44;UBERON:0000161!1.61e-09!35;UBERON:0005156!2.27e-09!59;UBERON:0000990!2.27e-09!59;UBERON:0005153!5.63e-09!37;UBERON:0000058!6.94e-09!26;UBERON:0005178!1.99e-08!34;UBERON:0002224!1.99e-08!34;UBERON:0003064!2.39e-08!37;UBERON:0000065!2.46e-08!53;UBERON:0005181!5.61e-08!35;UBERON:0009569!6.94e-08!113;UBERON:0003133!8.97e-08!48;UBERON:0000080!2.83e-07!18;UBERON:0002120!2.83e-07!18;UBERON:0004875!2.83e-07!18;UBERON:0005721!2.83e-07!18;UBERON:0005754!2.83e-07!18;UBERON:0007297!2.83e-07!18;UBERON:0003886!3.27e-07!63;UBERON:0003101!3.76e-07!22;UBERON:0000079!3.76e-07!22;UBERON:0004876!4.62e-07!20;UBERON:0002048!7.86e-07!22;UBERON:0000117!7.86e-07!22;UBERON:0000171!7.86e-07!22;UBERON:0000170!7.86e-07!22;UBERON:0005597!7.86e-07!22;UBERON:0000118!7.86e-07!22;UBERON:0000166!9.19e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;5.84e-12;33!UBERON:0005178;3.71e-09;34!UBERON:0002224;3.71e-09;34!UBERON:0004211;4.26e-09;10!UBERON:0009773;4.26e-09;10!UBERON:0001231;4.26e-09;10!UBERON:0004810;4.26e-09;10!UBERON:0006554;6.26e-09;30!UBERON:0001008;6.26e-09;30!UBERON:0005181;1.74e-08;35!UBERON:0005409;2.99e-08;22!UBERON:0002048;3.69e-08;22!UBERON:0000117;3.69e-08;22!UBERON:0000171;3.69e-08;22!UBERON:0000170;3.69e-08;22!UBERON:0005911;5.58e-08;36!UBERON:0004807;7.25e-08;22!UBERON:0006555;8.59e-08;15!UBERON:0004819;8.59e-08;15!UBERON:0001285;8.59e-08;15!UBERON:0007684;8.59e-08;15!UBERON:0003101;1.28e-07;22!UBERON:0000079;1.28e-07;22!UBERON:0001555;1.46e-07;54!UBERON:0000160;3.10e-07;17!UBERON:0003135;7.71e-07;11!UBERON:0000161;8.99e-07;19!UBERON:0000166;8.99e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.22e-27,160;UBERON:0000925,4.22e-27,160;UBERON:0006595,4.22e-27,160;UBERON:0001007,6.36e-22,145;UBERON:0001555,6.36e-22,145;UBERON:0007026,6.36e-22,145;UBERON:0004921,4.17e-20,118;UBERON:0005911,2.13e-14,82;UBERON:0001004,1.78e-13,74;UBERON:0005177,4.86e-13,101;UBERON:0001008,9.39e-13,48;UBERON:0006554,2.53e-12,47;UBERON:0001041,1.23e-11,87;UBERON:0009569,2.45e-10,112;UBERON:0005178,2.74e-10,34;UBERON:0002224,2.74e-10,34;UBERON:0005153,3.30e-10,37;UBERON:0000161,3.80e-10,36;UBERON:0005181,8.55e-10,35;UBERON:0000065,1.40e-09,54;UBERON:0005156,2.27e-09,59;UBERON:0000990,2.27e-09,59;UBERON:0004810,4.45e-09,10;UBERON:0006555,1.47e-08,16;UBERON:0004819,1.47e-08,16;UBERON:0005157,1.84e-08,47;UBERON:0000915,3.16e-08,52;UBERON:0002048,3.68e-08,22;UBERON:0000117,3.68e-08,22;UBERON:0000171,3.68e-08,22;UBERON:0000170,3.68e-08,22;UBERON:0005597,3.68e-08,22;UBERON:0000118,3.68e-08,22;UBERON:0003133,6.90e-08,48;UBERON:0004211,9.08e-08,15;UBERON:0009773,9.08e-08,15;UBERON:0001231,9.08e-08,15;UBERON:0001285,9.08e-08,15;UBERON:0007684,9.08e-08,15;UBERON:0004208,9.08e-08,15;UBERON:0003101,1.27e-07,22;UBERON:0000079,1.27e-07,22;UBERON:0000166,2.14e-07,22;UBERON:0000160,3.10e-07,17;UBERON:0004175,6.34e-07,25;UBERON:0003135,7.50e-07,11;UBERON:0005409,8.94e-07,25;UBERON:0004807,9.42e-07,28 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0.261185628199839,330.020676721526,2131.08476698779,27.3051715162715,22.683960127647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16742572642506,311.683795098356,50.9038002735243,325.013774936606,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.1889825921679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.255973222308837,0,0.236777252044017,0,0.403213486449465,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.087834785693126,24.9515138823143,355.552201373521,301.447751983741,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0.208994966536811,0,0,0,0.402829317109147,0,1.46437234528902,0,0,0,0,0.225222960966644,0,0,0,0,0,149.580259884889,0,0,0,0,0,0.560677600142307,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,72.279559083073,25.6381353355385,24.3783906080653,133.561208211907,122.059916624088,137.57362835751,109.673396206262,173.596745402432,107.303343568294,0,0,0,0,0,0.236613600079688,0,0,0,0,0,0,0,0,0,0,2.057870056657,0,13.9430538304014,1.96565443335525,0.590789906681404,0,208.588391769121,0,22.6085587941769,41.5886487053192,5.73015142746296,23.9804072960592,0,0,0,0,0,0,0,0,270.249904102072,250.677959331703,0,0,0,29.0574885359009,6.55130299975552,27.9296941567501,2.7763142037883,2.03443756959773,0,0,0,0.414656231081544,1.44119953416961,3.1560608356595,0.190493682876507,0,0,27.3715913636328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0.637938751653163,0,0,0,0,1.00034104211935,0.271265023699736,0,0,0,0,0,0,0,0,0.368738337083406,0,0,0,0,0.215714200818617,0,13.6407407150817,1.66435439510497,0.30239029332968,0,0,0,0,0,0,1.48418066444991,0,0,0,0,0,237.367958997946,146.570229791701,514.180242218045,0,0,0.131124414959424,381.71487251967,243.060403901533,109.80896768476,103.758849503815,87.9245068677655,0,0,0,3.08454505380579,1.08378575017541,9.03041592938736,303.302764923596,615.827322616185,40.0735810952699,0,0,0,0,0.325378394664303,34.3126568786915,0,0,22.3963559818507,18.2016868890226,0,0,0,0,0,0,0,0,0,253.381775248379,137.223708098686,42.8778713981803,326.638474382571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,172.430026004118,153.499221097695,258.071634121335,37.7516641114884,203.629041273492,311.672229985107,168.946888497473,77.6465092699523,0,0,0,0,0.822724546172388,0,0,0,0,0,262.928151747647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,454.002951030341,0,0,0,0,179.774597007481,41.872019997402,150.815904730723,0,0,0,0,27.6574284647671,14.5451031423281,75.4255089400033,313.908203826428,0,0,0,269.335448388539,328.861897879094,0,29.1984480685324,0,0,0,0,1.99613798001194,204.175364690823,124.280659994594,31.1749817436961,252.507661745524,160.179799684443,243.95208758451,0.344743373241465,0,0,0,0,0,0,0,0,0,313.703424626857,31.1648546940378,0,118.279282951075,185.17002041736,301.061867595884,76.8792794953926,50.2870787776224,77.290042522702,0,0,0,0,0,0,0,0,0,178.903157742426,109.265924218436,0,497.630965539252,189.918390988669,439.94170435221,0,0,0,0.067401132980677,0,0,0,202.708545213645,0,126.267008911805,262.549853825601,0,0,0,0,0,0,0,0,107.867017945291,0,372.285638728856,59.3833928331129,316.024919886861,174.72666824203,3.0957485844891,0,0,0,237.817068429604,0,30.2814192645913,0,0,0,805.867248250123,114.306477678687,154.326515196552,0,303.310328109393,0,0,0.14405479798815,0,329.735954428897,0,0,0,0,0,0,0,0,0,0,0,0,113.018314282429,1.71690419254628,0,0.403100834920358,0,104.846354574708,0,0,0,0,0,0,0,222.000098030191,238.355843623006,208.551049690651,0.2249738915515,0,0,0,81.4062956400717,95.6771687582365,0,0,184.814335018626,0,0,0,0,0,0,0,0,0,0,5.12932817873289,3.97520666736664,0,0,0,155.059304909668,91.5168125705143,52.8206465134878,137.113127319922,0.496166021811951,0,0,228.526170281725,0,0,0,0,106.482677257659,0,0,0,0,0,0.434674820589684,0,0,0,0,0,29.5050990658335,19.1295757766289,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0.901545653983311,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,304.500769759782,0,0,0,0,0,602.321160239928,217.727041011541,0,0,0,0,0,0,0,0,0,0,147.305017684526,0,0,0,0,0,0,0,0,0,0,183.143642722914,146.754335844589,134.636591314912,118.991436134848,0,0,0,7.82187414832275,0,204.75667094307,253.263773563535,0.818859587550484,248.841793103287,0,0,0,0.0634158101939068,0,135.967926180581,19.3522359571825,0,104.892953092108,0.535701835878287,0.672567444437648,51.5920763601137,12.0660961416188,62.3577662243351,0,0,0,0,27.4209710850806,57.840328983876,25.2747758978655,0,308.579651808482,45.6579360254748,0,0,0.214429632529969,0,0,0,0,3.31545862660859,2.21934020222135,2.07377898544228,163.486396351705,0,0,114.737890601742,243.540601262325,0,0,345.968850550572,460.128295188259,259.929016062198,1.29485767437579,0,0,10.19993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| ||
|short_description=p1@CLDN7 | |||
}} | }} |
Latest revision as of 06:25, 17 September 2015
Short description: | p1@CLDN7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CLDN7_5end |
Coexpression cluster: | C1334_Alveolar_gall_Renal_nasal_Prostate_signet_colon |
Association with transcript: | 0bp_to_uc002gfm.3, uc010cmc.2_5end |
EntrezGene: | CLDN7 |
HGNC: | 2049 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.96e-30 | 253 |
endo-epithelial cell | 1.38e-22 | 42 |
endodermal cell | 2.28e-18 | 58 |
respiratory epithelial cell | 4.20e-11 | 13 |
epithelial cell of alimentary canal | 2.24e-10 | 20 |
kidney tubule cell | 4.45e-09 | 10 |
nephron tubule epithelial cell | 4.45e-09 | 10 |
epithelial cell of nephron | 9.08e-08 | 15 |
epithelial cell of tracheobronchial tree | 1.03e-07 | 9 |
epithelial cell of lower respiratory tract | 1.03e-07 | 9 |
germ line cell | 7.04e-07 | 7 |
germ cell | 7.04e-07 | 7 |
general ecto-epithelial cell | 7.62e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.01e-18 | 106 |
cell type cancer | 1.70e-12 | 143 |
squamous cell carcinoma | 1.82e-11 | 14 |
adenocarcinoma | 5.30e-09 | 25 |